Oreochromis aureus (blue tilapia): 116327733
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Entry
116327733 CDS
T07295
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
KO
K16498
protocadherin delta 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116327733 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oau01009
]
116327733 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oau04515
]
116327733 (pcdh7b)
Protein phosphatases and associated proteins [BR:
oau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116327733 (pcdh7b)
Cell adhesion molecules [BR:
oau04515
]
Cadherins
Protocadherins
116327733 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Y_Y_Y
Mid2
TMEM154
K319L-like_PKD
LYRIC
MLANA
DUF1180
Motif
Other DBs
NCBI-GeneID:
116327733
NCBI-ProteinID:
XP_031605245
UniProt:
A0AAZ1XVA2
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Position
LG3:complement(22812977..22933530)
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AA seq
1255 aa
AA seq
DB search
MRTTGAVDYLYYCMLILQLVHQPAAKQVLRYRLAEEGPADVRVGNVATDLGIVAGSGEVT
FTLESGSDFFKIDNITGELSTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRLGSSGDSFSGKRRFEEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRDS
YELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSSPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGIANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSAQLDFETTQEYNVVIVAVDSGSP
SLASNNSLLVKVGDTNDNPPIFSQNVVEVSFPENNAPGERVTTVKAIDADSGRNAEIAYS
LDSSVNGIFSIDADSGDIRVNTILDRELTERYEFKVIAKDKGINTLQGSATVVVLVADKN
DNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKDQNAEMGLFIEEEEDIFSIENETGT
IFSTLSFDREQKGTYTFRVKAVDGGDPPKSATATVSLFVMDENDNAPTVTFPINSSYTLL
PPSTNIRTVVRTVTASDADTGINAVLNFSIIGGNPFRLFEIDAERGVISLMAKLEQKHHG
LHRLVVQVNDKGQPSQSTTTLVHVYVNETLSNSSAVEAQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGIVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSSQTIN
KYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPEDS
YERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECDEYGHSDSCWMPVRTSPERRPSKS
TTTPQQPKLSTFMSGNGSGSSSAEQPGSQETLAMAAMANGDPTAAHMMGDRNRNLLNKKM
ASSSSSYEAFGSPPYGSPGAGEEVLGHPTEEIPLAPTGEYKPTTCGTLTRREVYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaggactactggtgcagtggactatttgtactattgcatgctcatcttgcagcttgtg
catcagcccgctgccaagcaagtgctccggtaccgtttagctgaggagggaccagcagat
gtcagagtagggaacgtagccaccgacctgggcattgtcgccgggtccggtgaggtgacg
ttcaccctcgaatccgggtccgattttttcaagatagacaacattacaggtgagctctcc
accaacgagaggcggatagaccgtgaaaaactgcagcagtgccaaatgatatttgatgaa
aacgaatgttttattgattttgaggtgtcggtgataggaccagcgcagagctgggtcgac
ctctttgagggaaaagtcatcatattagatataaacgataacaccccgtctttcccttcc
cctgtcctgacactgtctgtggaggaaaacagacccattggaaccctttatctgctgccc
acagccacagacagagattttggcagaaatggaatagagagatatgagctcattcaggac
aatggggagaattcaaggcgattggggtcttctggggattcgttttcagggaagaggaga
tttgaggagggagcgagcaggagcagtgtctttgaattgcaagttgctgacactactgat
ggagagaagcagcctcaactcatcattaagggggcccttgatagggaacagagagactcc
tatgagcttacactgcgcgttagggatggaggagatccccctcgctcctctcaggccatt
cttagagtaatgataactgatgtgaatgacaacagccctcggtttgagaaaagtgtgtat
gaggctgacctgcctgaaaacagctcccctggcgcccccatactccagctcaaagcggct
gacgcagatgtgggggttaatggtcaaatagaatatgtgtttggggcagccacagagtca
gtaaggagactgctgaggttggatgagagcacggggtggctgagtgtgttgcaccgcatt
gaccgtgaagaagtgagccaactgaggtttacagtaatggcccgtgaccgaggccagcca
cccaagatggacaaggccacagtggtgctgaacatcaaggatgagaacgacaacgtgcct
gctatagaaattcggaaaattggacgcattttcttaaaagacgggatagccaatgtggct
gaggatgtggtggtggacacacccattgctttagttcaggtgtcagatcgtgaccagggg
gaaaatggcatagtgacttgcacagtggtaggagatgtgccctttcagctcaaaccggcc
agcgagatggagggcgagcagaataaaaagaaatattttctccacacgtctgcacaattg
gactttgagacaacacaggaatacaatgtggtcatagtggccgtggactctgggagcccc
agtctggcgagtaataactctcttctcgtcaaagtgggcgacactaatgacaaccctcct
atcttcagccagaatgtagtagaggtttcgtttcctgaaaacaatgcacctggtgagagg
gtgacaacagtgaaagccatagatgcagatagtgggaggaatgctgaaatagcctattcc
ctagactcatcagtaaatgggattttctctattgatgcagacagtggagacatccgagta
aacaccattctggatagagagctaacagagcgctacgaattcaaagtgatagccaaagat
aagggcataaacacccttcagggttctgcaacagtggttgtccttgtggccgacaagaat
gacaatgagccaaagttcatgcaggatgttttcaccttttatgtcaaagagaaccttgat
cctaacagcccagttggcatggttacagtaattgatgcagataaagaccaaaatgcagaa
atgggcctctttattgaagaagaggaggacattttctctattgagaatgaaaccgggact
attttttccaccctgtcctttgaccgagaacagaaaggtacctacaccttccgcgtcaag
gctgtggatggaggtgaccctcccaaatctgccaccgccacggtttcactctttgtcatg
gatgaaaatgacaatgctccaacagtcactttcccaataaacagctcctacacccttctt
cctccctccactaacatcagaactgtggtcagaaccgtcacagctagtgatgcagatact
ggcatcaatgcggtcctgaacttcagcatcattgggggtaaccccttcagactttttgag
attgatgcagagagaggggtgatttcgctaatggcaaagctggagcagaagcatcatggc
ctccacagactggtggttcaggtgaatgacaaggggcagccttcgcagagcaccaccaca
ctagttcatgtgtatgttaacgagacactttccaactcctcagctgtggaggcccaggtg
gctaagagcctgagcacatctctgaacaccaacatcgccggcgaccccaactatgaccta
agcaaacagcggttaagcattgtaattggaatagtttcaggcatcatgacagtcatcctc
atcattcttgttgttgtcatggcccgttattgccgtccaaagaacaagaacggttatgag
gccggcaaaaaagaccatgaagacttctttacgccacagcagcatgacaaatccaagaaa
cccaagaaagataagaagaaacaaaagtccaaacagccgctctacagcagcattgtcact
gtagaggcctcgaaacccaacgggcagcgctacgacggcgtcaacgagaagctgtccgac
agccctggcatgggccgctaccgttcagtcaacggagggccgggaagcccagatctggcc
cggcactacaagtccagctcgccactgcccacagtgcagcttcacccgcagtcaccgaca
gctggaaaaaagcaccaggcagttcaggacctgccccctgccaatacctttgttggcacc
ggagataacatttcccttggatctgaccactgctctgaatacagcagtcaaactatcaac
aagtacaacaaacagccgtttcgccgagtgaccttctcggtggtgagccagccccaggat
cctcaccagcagggatcgctgcagagctgctacgacagcggcctggatgagtcggagaca
ccgagcagcaagagttcgtcgggcccccggctgggcgcccttccccttcccgaggacagc
tacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgactcc
cggcccttgcctgacgtagccatgactggcaagtgcacccgggaatgtgacgagtatggc
cactcggactcctgctggatgcctgtgcgcacgtcgcccgagcgacggccatccaagtca
accaccaccccccaacaaccaaagctttccactttcatgagcggcaacggcagcggcagc
agcagcgccgagcagcccggcagccaagagaccctcgccatggccgccatggccaacgga
gaccccaccgctgctcacatgatgggtgaccgcaatcgcaacctgctcaacaagaagatg
gcctcctcctcctcctcctatgaggccttcggatcgcctccctatggctcgccaggagcc
ggggaggaggtgctgggccaccccaccgaggagatcccccttgcacctactggggagtac
aagcccacaacctgtggtactctgacgcgacgggaggtgtatctgtga
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