Oreochromis aureus (blue tilapia): 116327760
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Entry
116327760 CDS
T07295
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116327760 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oau04812
]
116327760 (nedd1)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
116327760 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
116327760 (nedd1)
Cytoskeleton proteins [BR:
oau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
116327760 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_LRRK2
Beta-prop_VPS8
Beta-prop_IFT122_1st
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
116327760
NCBI-ProteinID:
XP_031605277
Ensembl:
ENSOABG00000001247
LinkDB
All DBs
Position
LG7:complement(65404935..65415744)
Genome browser
AA seq
665 aa
AA seq
DB search
MEEVTRLVSTGDCVKIWDAVSMAPLEQFNPHSTSHPVAQACWSSNNQYLVSASSSGDKLV
VSSLKSTPVPVVELADGKKQTRVCLSSSSQFLVSGGLDHCVHIWDLKTKRLHRSLKDHKE
EVTCVSFNANDSYVASGSTSGDLVLHSLTTNLSSRPFGHGSNQPIHDLRLSTVKRSLLGS
VSDSGTVVLWDSNTQKELHVFDGAHKAPGSGLAFSPTSDLLVVSVGLDKKIVCYDTTSKI
VLRSIRVDSPLTAVDFTLDGTGLVVGSTHGKIYQYDLRNSSAPTRITVAHKTSVTCLRFQ
SNTSRHKSSKMGSSKTSSSKRSSIKLPSSQPDPTPSTGPAPNRQVTNTAGGAAVEGMCRE
AEGQQGAEQPPALEKFSSVGRNSLDIFSPAREDPVSHGTTANTPFGRGHVTTLEVMSRDG
EGQQLTGRASLDIFSPVREDSQAGPNSHRKTPLGTPLAASAGRCYSPLSVFQTPPAIKEE
EPNTAVAREPCDSRKSDKVSCSSLETQSQSTPPMSQPANHSQLAPPFFTPEPSLRRANGI
QAQLSYDSPVHGVPPTTSAAAGPALSAAVSSSLSQNIADVVGQAGAAPLTSLQIHFIQNM
IHETLEEFRNACHKDIINLQVEMIRQFYIQLTEIHSLIEKYSVNESLVEEIERLREENRR
LRANY
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacacggctggtgtcgaccggagactgcgtgaagatctgggatgcggtt
tccatggcgccgctggagcagtttaacccacacagcacaagccaccctgtcgctcaggcc
tgctggagctccaacaaccagtacctggtcagtgccagcagcagcggggacaagctggtc
gtttccagcctcaagtcgactcctgtgccggtggtggagctggccgacgggaaaaagcag
acccgggtgtgtctgagctcctcgtctcagtttctggtcagcggaggtctcgatcactgc
gtgcacatctgggacctgaagaccaagagactgcaccgctccctcaaggaccataaggag
gaggtgacttgcgtatcctttaatgccaacgacagctacgttgcctccggctccaccagc
ggcgacctggtcctccacagtctgaccaccaacctgtccagcaggccgttcggccacggc
agcaaccagcccatccacgacctgaggttgtccacagtgaagcgctccctgctgggcagc
gtgtctgacagcggcacggtggtactgtgggactccaacacccagaaggagctgcacgtg
ttcgacggcgcccacaaagccccaggctctggcctggccttctcgcccaccagcgacctg
ctggtggtcagtgtcggcctggacaagaagatcgtctgctacgacaccaccagcaagatc
gtcctgaggtccatccgcgtggacagtcctctgaccgccgtggacttcactctggacggt
actgggctggtggtcgggtccactcacgggaagatctaccagtacgacctgagaaactcc
agcgcccccaccaggatcaccgtggcccataaaacctcagtgacctgcctgcgcttccag
agcaacactagcagacacaagtccagcaaaatgggctcctcaaaaacttccagctctaag
agatcctccatcaagctccccagcagccaaccagatcccacccccagcacaggccctgcc
cccaacagacaggtgacaaacacagcaggaggcgctgctgtggaggggatgtgtcgggaa
gctgaaggccagcagggggcggagcagcctcctgctctggagaagttcagtagcgtggga
cgaaacagtctggacatcttctctcccgctcgcgaagacccggttagccacgggaccacc
gcaaacaccccatttggacgaggacacgttaccactttggaggtgatgtccagagatggg
gagggtcagcagctgacaggccgggccagcctggacatcttctccccagtcagagaagac
tctcaggcaggtcccaactctcacaggaagacgccactgggaacgccgctcgcagcctca
gcggggcggtgctacagcccgctgtctgtcttccagacccctccggctatcaaagaggag
gagccaaacacagctgtagccagagaaccgtgtgactccagaaagtctgacaaagtcagc
tgttccagtctggagacacagagtcagtccacgccccctatgtcacaaccagccaatcac
agtcagctggccccgcccttcttcacaccagagcccagcctccggagagccaatggcatt
caggctcagctgagctacgactcacctgtccacggagttccacccaccacctctgcagca
gcaggtccagctctgtcggctgccgtttcctcgtccctctctcaaaacatcgccgacgtg
gttggacaggccggagctgctcccctcacctccctgcagatccacttcatccagaacatg
atccatgaaactctggaggagttcaggaacgcctgtcacaaagacatcatcaacctccag
gtggagatgatccgacagttttacatccagttgactgagatccacagtctgatagagaaa
tactccgtcaacgagtctctggtggaggagatcgagaggctgagggaggagaaccgccgg
ctcagggccaactactga
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