Oreochromis aureus (blue tilapia): 116327860
Help
Entry
116327860 CDS
T07295
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03440
Homologous recombination
oau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116327860 (top3a)
03460 Fanconi anemia pathway
116327860 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oau03032
]
116327860 (top3a)
03400 DNA repair and recombination proteins [BR:
oau03400
]
116327860 (top3a)
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
116327860 (top3a)
DNA replication proteins [BR:
oau03032
]
Eukaryotic type
DNA Topoisomerases
116327860 (top3a)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
116327860 (top3a)
FA (Fanconi anemia) pathway
116327860 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
116327860
NCBI-ProteinID:
XP_031605393
Ensembl:
ENSOABG00000017990
LinkDB
All DBs
Position
LG4:complement(26827201..26846622)
Genome browser
AA seq
1037 aa
AA seq
DB search
MLVACLLRRSVLLSGLRRPGVQRRYFCAVQSVLQDTVQQEADMIRSRGQIRRVLCVAEKN
DAAKGISEIMSSGRANRREGMSKFNKIYEYEYHLFGQNVTVTMTSVSGHLLGLEFKAPFQ
KWHSCNPVLLFDAEVEKYCPDNMLQIKRTLEKEVRQCQALVIWTDCDREGENIGFEIIDV
CKAVKPNLQVFRAKFSEITPNSIRRACETLTEPDGNVSDAVDVRQELDLRIGASFTRFQT
LRLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVIHEVEEDCVDF
NWKRNRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVELEKLASRKLRIS
AKETMKIAEKLYTQGFISYPRTETNIFPPNLALTPLVEQQTHSPVWGAFAQRVLDQPGGP
NPRQGKNSDQAHPPIHPTKFTNALQGNEGRVYEFIVRHFLACVSQDALGQETVVDIDIAQ
EKFSASGLMIIARNYLDVYPYDRWSTKVIPVYEQGSQFQPSAIEMVDGQTSPPQLLTEAD
LISLMEKHGIGTDATHAEHIETIKSRMYVGLTADQRFTPGELGMGLVEGYNSMGYEMSKP
NLRAELEADLKLVSEGRKDKQSVLQHHIQKYKTVFIESVRKAKKLDEALSPYLGAAHEIP
EAEQQDMEIPLPVRKCPNCGRDMVLKKKREGNGKYLSCVGFPACKTAVWFPDVVLEVSRD
ESICPTCQPHPIHMLKFKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRPGGGGGG
AGVGGRGGRGDDPHPPPPRPPRPDPSRTRVSNPRPSVPPVPSWTPQPTSPPGGRSMSVNA
SSDAIVCNCGQDALLLTVRKDGPNQGRQFYKCNAGSCNFFLWADQPSQQGAPQYRGPPPP
ALRTSQPPRPSLGFRNTSEGSRGQEAGAPGHLGQVMCNCNEAAVTRTVQKDGPNKGRMFH
TCGKPREQQCGFFQWADENVPPPGGFGGGFYSDGDGGRKGRKMMGDPSANRPPAAKKPRT
CGICHMPGHTRVTCPQR
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgctagtagcgtgtctcctcaggagatctgtgcttttatcgggactacggcggccggga
gtccagcggaggtatttctgtgcggtgcagagtgtcctccaggacacagtgcagcaggag
gcagacatgatccgaagccgggggcagatccgtcgggtcctctgcgtggccgagaaaaat
gatgctgctaaggggatctctgaaattatgtccagcggcagggctaataggagggaagga
atgtcgaagtttaataaaatctatgagtatgaatatcatctctttgggcagaatgtgact
gtcacaatgacatcagtgtcagggcatttactgggtctggagtttaaagctccatttcag
aaatggcacagttgcaatccggtgctgctgtttgatgcagaagtagagaaatattgtccg
gataatatgttacagattaagcgaacgctagagaaggaggtgaggcagtgccaggcctta
gtcatctggactgattgtgatagagagggagaaaacattggcttcgaaatcatagatgtt
tgcaaagcagtgaagccaaatttacaagtctttcgggcaaagttttctgagatcacgccc
aactcaatccgaagagcctgtgagactctaacagagcctgatggtaacgtcagcgatgca
gttgatgtccgccaggagctggacttgcgtataggtgcatcttttactcgattccagaca
cttcgcctgcagaagatcttcccagagtccctggccaatcagctgatctcatacggcagc
tgtcagtttcccactctgggttttgtggtggagcgcttcaaagccatccaggcattcata
cctgagactttctacaagatcaaagtgatccacgaggtggaggaggactgtgtggacttc
aactggaaacgaaaccgcctcttcaatcacacagcttgtctagtgctctaccagatctgc
atggaggatcccatagcaacagtcacctcagtaaccagcaaacctaagagtaaatggagg
ccactgcctttggacactgtggaactggagaaactggcttcacggaagctcagaataagt
gccaaagagaccatgaaaattgcagaaaagctctatactcaggggttcatcagctatccc
cgcacagagaccaacatttttccaccaaacttggctcttaccccgctggtggagcagcag
actcacagcccggtgtggggggcgttcgcccagcgagtgcttgaccagccggggggaccc
aacccaagacagggcaagaactctgaccaagcccaccctcccatacatcccactaagttc
actaacgcactgcagggcaatgaaggacgtgtgtatgagttcatcgttcgccatttccta
gcttgtgtatcccaggatgctttgggacaggagactgtggttgatatagatatcgctcag
gagaagttctccgcctcgggactcatgatcattgcaaggaactacctggatgtttacccc
tatgacaggtggagcacaaaggtgattccagtgtatgaacaaggctctcagttccagccc
tctgctattgagatggtggacggacagacgagtcctccgcagctgctcactgaagccgac
ctcatatcactgatggagaagcacggcattggtacagatgcaacccacgctgagcacatt
gagactataaagagtcgcatgtatgtgggcttgacagctgaccagaggtttacacctgga
gagctgggcatggggctggtggagggttataactccatgggctacgagatgtcaaaaccg
aacctgcgtgccgaattggaagcagacctcaagctggtatcagaaggccgaaaggacaaa
cagagcgtgctgcagcatcacatccagaaatacaagaccgtcttcattgagtctgtcagg
aaagcaaagaagttagatgaagcgctgtctccctatctcggtgcagctcacgagatccct
gaagcagagcagcaggacatggagatcccgctgccggtgaggaagtgccctaactgtggt
cgggacatggtgctgaagaagaagagagagggaaacggtaaatacctgtcatgtgtgggc
ttcccagcctgtaaaacagcagtgtggtttcccgacgtggtgctcgaggtcagcagagat
gaaagcatatgtcccacctgtcagccacaccccattcatatgttgaagttcaagttccgc
aggggtagccttcctcccatgatgcctctggagtttgtcggctgcatcggtggctgtgac
gagaccctccgagaagtgctggacctgaaatatctcagaccggggggaggtggtggtggt
gcaggagttggaggacggggtggaagaggagatgaccctcatcctccacctccaaggcca
cccagacctgatccgtccagaacccgagtctccaatcctcgcccttctgtcccgcctgtg
ccctcctggaccccacagccgacgtctccaccaggtggccgcagtatgagtgtaaacgcc
agcagtgacgcgattgtgtgcaactgtggtcaggatgcactcctcctgactgtgcgcaaa
gacggccctaatcaaggccggcagttctataagtgtaacgccgggagctgcaacttcttt
ctttgggcagatcaacctagtcagcagggggcgccacagtatcgagggccgccaccgcca
gcattgaggacttcccagcctccaaggccatctctgggattcagaaatacatctgaagga
agcagagggcaggaagcgggtgcaccaggacatttgggacaggtgatgtgcaactgcaac
gaggcagccgtgacacgcacggtgcagaaggacggtccaaacaagggtcgcatgttccac
acctgtgggaagccaagagagcagcagtgtggcttcttccagtgggctgatgagaacgta
cctccaccaggtggttttggtggtggattttatagtgatggagacggcgggaggaaggga
aggaagatgatgggagatccgagtgctaacagacccccagctgctaagaaacctcgcacc
tgtggcatctgccacatgccgggacacacccgagtcacctgtcctcagcgatga
DBGET
integrated database retrieval system
