Oreochromis aureus (blue tilapia): 116327920
Help
Entry
116327920 CDS
T07295
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04136
Autophagy - other
oau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116327920 (atg13)
04136 Autophagy - other
116327920 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116327920 (atg13)
03029 Mitochondrial biogenesis [BR:
oau03029
]
116327920 (atg13)
Membrane trafficking [BR:
oau04131
]
Autophagy
Autophagosome formation proteins
ULK complex
116327920 (atg13)
Atg1 complex
116327920 (atg13)
Mitochondrial biogenesis [BR:
oau03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
116327920 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
116327920
NCBI-ProteinID:
XP_031605475
Ensembl:
ENSOABG00000006803
LinkDB
All DBs
Position
LG23:complement(13015415..13024570)
Genome browser
AA seq
538 aa
AA seq
DB search
MESDLKPQDQKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKEIKVSYAVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLSGLGEGFQTVRVGVVGTPI
GTITLSCAYRTNLAFMSNRQFERSAPIMGIIVDHFVDPPCSSQRPANMGHPCNYRAPDEE
DGGQFAGVQDSQEVCATSFSTSPPSQCVCTLSPSPSKLPKPLPLDSLQLPLAPGLVTHTL
YASRLSYQPTALAGAAEFCHPASNPNQVLHAGKEGGALLMPPHGADVHLTVEHAPNTPSS
SGDDDGLSQSGEGRKEEGRRSVSPSDPVESLNAFTRKVGAFVNKPSTQITAASLDLPFAA
FAPRGLDSEENDPMVHPPDSPPCPSPLQGSLHSQGSEGSGQQDDFVMVDFRPAFSKDDLL
PMDLGTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLRVYEKNIDEFDAFVDMLQ
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgacctgaagccccaggatcaaaaggacttagacaagtttattaagttcttt
gcacttaagactgtccaggtgatagtccaagccaggctgggagagaagatctgcactcgc
tcgtcatcatcgcctactggatctgactggtttaatttggccatcaaagacatcccagag
gttacccatgaagccaaaaaggcactggctggccagcttccaggcattgggcgctccatg
tgtgttgagatctctctgaagacatcagagggggactcgatggagttggagacttggtgc
ctggagatgaatgaaaagtgtgataaggaaatcaaggtgtcgtatgcagtctataaccgt
ctgtctgtcctcctgaagtctctgctggccatcaccagagtcacgcctgcttataaactg
tccagaaagcagggacacgactatgtcatactctacaggatctacttcggagaggtccag
ctgagtgggttaggagaaggtttccaaacggtgcgcgttggagttgttggcacccctatc
ggtacaatcacgctttcatgcgcctaccgcaccaatctggcattcatgtctaacaggcaa
ttcgaaaggtcggctcccatcatggggatcatcgtggatcactttgtggatcctccttgc
agcagccagcgtccagcaaacatgggccatccctgcaattacagggctcccgatgaagag
gacggagggcagtttgcaggcgttcaggactcacaggaggtctgcgccacctcattctcc
acctcccctccctctcagtgtgtgtgtacgctgagcccgtctccctctaaactgcccaag
ccccttccgctggatagtctgcagctcccattggctcctggacttgtcactcacactctg
tacgcctccaggttatcctaccagccaacggctttagcaggagctgcagagttttgtcac
cctgcttccaatccaaaccaggtcttgcatgctgggaaggaaggtggggctctgttgatg
cctcctcatggagcagatgttcatctgacagtagagcatgcccccaacacaccgagcagc
agtggcgatgatgatggcttgtcgcagagcggagaaggacgcaaagaagaagggcggagg
agcgtttccccctcggaccccgtggagtcactcaatgcgttcacaaggaaggtcggagcc
tttgttaataaacccagcacacagataacagcagccagtctggacctgccatttgctgcg
tttgctcctcgaggcctggactctgaggagaatgatcctatggttcaccctccagattct
cctccctgcccgtcccccctgcagggcagccttcattctcagggctcagagggatcaggg
cagcaggacgactttgtcatggttgattttcgtccggccttctctaaagacgacttgttg
ccgatggatctgggcaccttctacagagagtttcagaatcctccacaactggccagtctc
tcgcttcacatcagttcccaatcgatggctgacgacctggactctctgccggagaagctg
cgcgtctatgagaaaaacatcgacgagtttgacgccttcgtggacatgcttcagtag
DBGET
integrated database retrieval system
