Oreochromis aureus (blue tilapia): 116327939
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Entry
116327939 CDS
T07295
Symbol
si:ch73-63e15.2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116327939 (si:ch73-63e15.2)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116327939 (si:ch73-63e15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-GeneID:
116327939
NCBI-ProteinID:
XP_031605495
Ensembl:
ENSOABG00000019581
LinkDB
All DBs
Position
LG23:complement(40417097..40480330)
Genome browser
AA seq
1582 aa
AA seq
DB search
MPTLTSAMAMDGENYLHPEGPQVDNSLFSVTPSSMESSIFPTPTTWPLSSHQSGYSIHCP
MQSGNQQYHLNGRAFTNIPDMPVDMYPGISDMDFPSLNFSRNGEFTQDLPCLDDISTNSL
FSSPTDSLSEYADTQSFINAENLDTVPTIWDVSTSTTTPAQSQLEQNGTSRFQGLASLED
ISAIISTPPLGGFQPQTTQAATEEEEEAEEEEAEELGHVDTYAEYKPSKSTIGISHPDIV
VETNTLSSVPPPDITYTLSIPESTIKNGLLSALQLEAIIYACQQHEVILQNKQRAGFLIG
DGAGVGKGRTVAGIILENYLKGRKKALWFSISNDLKFDAERDLKDIDAPNIPVHALNKIK
YGDTATSEGVLFATYSALIGESQAGGQLRTRIKQILDWCKPEFDGVIIFDECHKAKNATS
TKMGKAVLDLQSKLPHARVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFDDFLHSIEK
RGVGAMEIVAMDMKVSGMYIARQLSFSGVSFRIEEIGLDSDFKEVYNKAAKLWAEALKTF
MQAADELGMVSRKSLWGQFWSSHQRFFKYLCIAAKVRSLVELAQKELEAGKCIVIGLQST
GESRTREVLDENDGHLDRFVSAAEGVFQSLVTKHFPSEKQSREKAPSNKRKRKPRGRQPK
VPKHSVDNSGVINIITDDSSSDSDGIDTDSNSSPDSLLDNDDVIFVNQTSYQTARIEEMK
QDLLNKIAELGKELPLNTLDELIDKFGGPDKVSEMTGRKGRVVRRPDGTVRYESRAEQGL
TIDHINLKEKDRFMSGEKLVAIISEAASSGISLQADKRVKNQRRRVHMTLELPWSADRAI
QQFGRTHRSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSRY
NFENKYGTKALDKITKAILGFIDNKVPPPKGYPGGDAMFFRDMKAGMVDVGILCKEPRIG
NNNEKDCSITKFLNRILGLEVHKQNHLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGND
EIYEETQETFLTAGNPQDGQVVLYKISVDRGMPWDEAYKKSLNLSGHDEGFYLSVKLRGN
YPCVLLAEQGRGKNFVVYKPNIGKQTHPESLEKLHQKYRKVTPEEARDCWENQFTFSFKK
CSHANWNGKCKKIEEGQECLQGMRLRQYHMLCGALLRVWKRVSDVVSDITNSSILQIVRL
KTKQHNKQVGIKIPETCVPRVRDELLQMDDEVKKRRKEKEQAAENERKRKNEYLQGHRQL
VENLTNHKTMHTQSLTQPFDPRFPLQHRMHPQAQPTLPHLSSALLTLPINSSQTQQRTHN
SWSNNSSSFSNTNQSSLNNSVGLNLPQFYSSAYMNTFQQTKNLPPLHQTKQPSTLSSKNP
FDDILDLTMSSPSPSPDTTEGGLNLETLTSNSAAFADDFNLESLISQTAPNAQHAAQVQL
PLMLQQPLQASQQQQQQQQQNHNLLANNHHDLLDYFDISLSPQMPTQKASPSSSTSSCSS
STSSTSSVSNNMGSLFSNPSPNSLFSGSSSHFPPAYLLSSSDSVPLPNGNCSSGALDVRE
ALNSMLQAGPDRKSVIQYRPQE
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctcacctcagcaatggccatggacggggagaactacctgcatccagaaggc
cctcaggtggacaacagcttgttctctgtaaccccctctagcatggagagttcaatattt
cccacccccactacctggcccctctcttctcaccagagtggatacagcatacactgccct
atgcagtctggaaatcagcagtaccacttaaacggcagagctttcaccaacattccagat
atgccagtggatatgtacccgggaatctctgacatggactttcccagcctcaacttctct
aggaatggagagttcacccaggacctgccctgccttgatgacatctccacaaactctctg
ttctcctctccgactgactcactgtcggagtatgctgatacccagtccttcatcaatgca
gagaacctggacacagtgcccacaatctgggacgtcagcactagtaccaccacaccagca
cagagccagttagagcagaatggcaccagcaggtttcaaggcttggcaagtttggaggat
atatctgctattatcagcaccccacctttaggaggattccagcctcagacaacccaggca
gcaacagaagaggaagaggaggctgaggaagaagaagcagaggaactgggacatgtagac
acatatgctgagtacaaaccttccaaatccactataggaatttctcatcctgacatagtg
gtggaaacaaacactctatccagtgtccctcctcctgacatcacatacactctgtccatc
cctgagtcaactattaaaaacggtctgctgtctgctctgcagctagaggctatcatatac
gcctgccagcaacatgaagtgatcctccaaaacaagcagagggcaggcttcctgatcgga
gatggggcaggggtcggaaagggacgcactgtggcaggaatcatcctggagaactacctt
aagggaagaaaaaaagcactatggttcagcatatccaatgacctgaaatttgatgcagag
agagatctcaaagacatagatgcaccgaatattcctgtgcatgctttaaacaagataaag
tacggtgacacagctacctcagaaggagtcttgtttgcaacttactctgcactgattgga
gagagccaagcaggagggcagcttcggacgaggatcaaacagatcctggattggtgcaaa
ccagaatttgatggagttattatttttgatgaatgccacaaagccaagaatgccacatct
acaaagatgggcaaagcagttcttgacctgcaaagcaagctgccgcatgccagggtggtg
tatgccagtgccacaggtgcctctgagccaaagaacatgatttatatgagccgactagga
atttggggtgagggcacacccttccgaacctttgatgacttcctgcattccattgagaag
agaggtgtcggggccatggaaattgtggccatggacatgaaagtgagtgggatgtacatt
gccagacagctgagcttctctggggtgtctttccgcattgaagagatcgggctggacagt
gacttcaaagaggtctataataaagctgccaaactgtgggccgaggcgttgaaaacgttc
atgcaggcagctgatgaactgggcatggtcagcaggaagtctctttgggggcagttctgg
tcgtctcaccagcgattcttcaaatatctctgtatcgctgccaaggtccgctccttggtg
gagctggcccagaaagagctggaggctggaaagtgcatcgttattggactccagtctacc
ggagaatcgcgcaccagagaagtcttggatgaaaacgacgggcatctggacagatttgtt
tctgcagccgagggagtattccagtctcttgtaacaaagcatttcccttcagagaagcaa
agcagggaaaaagctccaagtaacaagagaaaacggaaacccagaggtcgccagcccaaa
gtacccaagcacagtgtggacaacagcggtgtgatcaacatcatcactgatgacagcagt
agtgactccgatggcatagacacagactctaactcttcaccagactccttgctagataat
gacgacgtcatctttgtgaaccagactagctaccagacagccagaatagaggaaatgaag
caggacctcctcaacaaaatagcagaactgggaaaagaactacctctcaacacattggat
gagctcattgacaagtttggtggaccagataaagtctctgagatgactggtcgtaagggt
cgtgtggtgcgacggcctgacggcactgtccgttatgagtcacgagctgagcaagggctt
acgattgaccacatcaatctcaaggagaaagatcgcttcatgagtggagagaagttggtg
gccatcatctcagaagcagcaagctctgggatttccctgcaggcagacaagagagtgaaa
aaccagagacgcagggttcacatgaccctggagctgccttggagtgcagacagggctatt
cagcagtttggtcggactcatcggtcaaatcaggtgacagcccctgagtacatctttctc
atctcagagttggctggggagagacgttttgcctccattgtggctaagagactagagagt
ctgggtgcattaacccatggagacagaagagccacagaatccagagacctgagcagatac
aattttgagaacaagtacggtaccaaggctctggataaaattaccaaagcaattcttggc
ttcatagataacaaggtgccccctcccaaaggctacccagggggtgatgccatgttcttc
agagacatgaaagctggaatggttgatgttgggattttatgtaaggagccccgcattgga
aacaacaatgagaaagactgcagcattacaaagttcctaaatcgcatcctgggtctggag
gtccacaaacagaaccatctcttccaatactttactgacaactttgactatctcattgag
aaggataaaaaggagggcaaatatgacatgggaatcctagaccttgccccaggtaacgat
gagatttatgaggagacacaggaaactttcttgacagctggaaatcctcaggatggccag
gttgttctgtacaagatcagtgtggacaggggcatgccctgggatgaggcctacaagaag
tcactgaacctcagcgggcatgatgagggattctacctgtctgtgaagcttcgaggtaac
tatccatgtgtgctgctagctgagcaaggaagaggaaagaactttgtggtctataagccc
aacatcggcaagcagactcaccctgagagtctggaaaaactgcaccaaaagtacaggaag
gtgacccctgaggaagccagggactgctgggagaaccagttcaccttctccttcaagaaa
tgcagtcacgctaactggaatgggaagtgtaagaaaattgaggaaggccaggagtgtctg
cagggcatgcgcctccgtcagtatcacatgctgtgtggagctctgttacgagtgtggaag
cgcgtctctgatgtggtgtctgacatcaccaacagcagcatcctgcagattgtccgcctt
aaaacaaagcagcataacaaacaagtcggtatcaagatcccagagacctgcgttcctcgt
gtacgggacgagctcctacagatggatgacgaagtgaagaagaggcgaaaagagaaagag
caggctgctgagaatgagcgcaagcggaagaatgagtacctgcaggggcacagacagctc
gtggaaaatctaaccaaccacaaaaccatgcatacccagtccctcactcagcctttcgac
ccgagattcccactccaacacagaatgcatccccaagcccagcccaccttaccacacctc
agttcagccctcttgaccttaccgataaattctagccaaacccagcaaaggacccataac
agctggtccaacaattcgagttccttctccaacaccaaccagagctctctgaacaactca
gttggcctcaatctcccacagttttactcatccgcctacatgaacacttttcagcaaacg
aagaacctgcctccactccatcagaccaagcagccttccactttgtcttccaaaaatcct
ttcgacgatatcttagaccttaccatgagctctccgtctccctctccagacaccacagag
ggcggactcaatctggaaactctgacaagcaactctgcagcatttgcagatgattttaat
ctagagtctctcatctctcagactgcaccaaacgcccagcatgctgcacaagtgcagctg
cctctcatgctgcagcagcctctacaggcctcgcagcagcaacagcagcagcagcagcag
aaccacaacttgctggccaataatcaccatgacttgttagattattttgacatatctctt
tcccctcagatgcccacacagaaagccagcccttcgtcttctacctcctcctgctcttcc
tccacgtcctccacctcttctgtgtcaaacaacatgggttctctcttctccaacccatcg
cccaactctttgttttccggctcttcctctcacttccccccagcctatctcctctcatca
tcagactctgttcccttacccaacggcaactgcagctccggcgctcttgacgtccgcgag
gctttgaacagcatgctacaggccggaccggaccgcaaatctgtcattcagtacaggccg
caagagtga
DBGET
integrated database retrieval system
