Oreochromis aureus (blue tilapia): 116328077
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Entry
116328077 CDS
T07295
Symbol
zgc:110269
Name
(RefSeq) probable flap endonuclease 1 homolog isoform X1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03030
DNA replication
oau03410
Base excision repair
oau03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116328077 (zgc:110269)
03410 Base excision repair
116328077 (zgc:110269)
03450 Non-homologous end-joining
116328077 (zgc:110269)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oau03032
]
116328077 (zgc:110269)
03400 DNA repair and recombination proteins [BR:
oau03400
]
116328077 (zgc:110269)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oau04147
]
116328077 (zgc:110269)
DNA replication proteins [BR:
oau03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
116328077 (zgc:110269)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
116328077 (zgc:110269)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
116328077 (zgc:110269)
Exosome [BR:
oau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116328077 (zgc:110269)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
Bac_transf
XPG_I_2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
116328077
NCBI-ProteinID:
XP_031605645
Ensembl:
ENSOABG00000016928
UniProt:
A0A668UDH9
LinkDB
All DBs
Position
LG18:complement(10646528..10652154)
Genome browser
AA seq
348 aa
AA seq
DB search
MGITKLADLIRSDAPDAISYKDITHYTGKVIALDTSIVVNQFRAATPLLSPLTGLFFRTL
TFLEHGIKPVFVFDGKPPGEKKAVLEKRAQTAGRNYSNWTGTASSQTKECLQLLEYLGVP
VIQAPGDAEALCAQLVREGTVHAVASEDMDTLPFGANILIRQLNAKKDSEVIEYSLPKLL
EKLQIGRKEFVDLCILLGCDYCEKIPGLGPKRALTLIQKHRTIEDVVLHINKKTHPVPNI
WKYREARKIFLDGPQSSAPELIWTEPNEEALVEFLCHTKRVKEERIRNRMVKFRTMRENK
REEREKEKAEGGGKQTSIKDFFRVTRKRVQPVDNASSSTSDRKRPKSK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggggatcactaaactggctgatttaatacgctcagatgctcctgatgccatatcatat
aaggatatcactcactacacaggaaaagtaatcgcactcgatacctctattgttgtaaat
cagttccgtgcagcaacgcctttactgagccccctcacaggtctcttctttcgcacactc
actttcctggaacatggcataaaaccggtctttgtgtttgatggaaagcctcctggggaa
aagaaggctgttcttgagaagcgagcccagacagcaggtaggaattactcaaactggacg
ggcacagcgtcatcacagactaaagaatgtcttcagcttctggagtatctgggtgtacct
gttatccaggctccaggggacgctgaggcactgtgcgctcagctggtgagagagggaact
gtgcacgccgtagcgtcggaggacatggacacgctgccgtttggagccaatattcttatt
cgtcagctgaatgcaaagaaagacagtgaagtcattgaatactccttacctaaactgtta
gaaaaactccaaattggtcgtaaggagtttgttgacttgtgcattttgcttggctgcgac
tactgtgaaaagatacccggtttgggtcctaagagagctctgaccctgatccagaagcac
cgtaccatagaggatgtggttttgcatatcaacaaaaagacccatcctgtaccaaatatc
tggaaatacagagaagcaaggaagattttcttggatggaccacaaagctcagctcccgag
ctcatctggacggagccaaacgaggaggccttggttgagttcctctgtcacaccaaacga
gttaaggaggagaggatccgtaatcgaatggtgaagttccgtacgatgcgggaaaataaa
cgggaggagagggaaaaggaaaaggcagagggtggtgggaagcagacttccattaaggac
ttctttagggttaccagaaagagagtgcagcctgtggacaatgcaagctcctcaaccagc
gacagaaagagaccaaagtcaaaataa
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integrated database retrieval system
