Oreochromis aureus (blue tilapia): 116328126
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Entry
116328126 CDS
T07295
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04120
Ubiquitin mediated proteolysis
oau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116328126 (syvn1)
04120 Ubiquitin mediated proteolysis
116328126 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116328126 (syvn1)
Enzymes [BR:
oau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116328126 (syvn1)
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116328126 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
116328126
NCBI-ProteinID:
XP_031605697
Ensembl:
ENSOABG00000019771
LinkDB
All DBs
Position
LG2:complement(3485067..3494804)
Genome browser
AA seq
640 aa
AA seq
DB search
MVRAALVTVTSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHLRVLSLMGLLGVMDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYLLHTIDLQSENPWDNKAVYMLYTDLFTGVVKVFLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAVMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRATNNNQTPAPAQAPPPAPAAPANAP
ANAPAGQPPNVALGMLPGFPPGIFPFWGPFPAVLPPAGAAVPPAPAPGATDAPQSSTEST
QTASTTQPTTSTADSATTAAAPGSAVPGFPFSFPPPPFPAAPWLPMPPPPPFVSSMPPPP
PSLSRLSEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAGS
TGEASGTNHTASSSTAGSNTESPSTERDLSDQVNGATVSSQSPESTSVASGTERKEKMDE
GVEDGEDGEPNAAELRRRRLRKLETTPSSSSSPPSPPPDN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccttagtgactgtcaccagtctggcgttgactggggccgttgtggca
catgcctatttactcaaacaccagttttacccgactgtagtttacctcaccaagagcagt
cccagcatggcggtgttgtacatccaggcatttgtgctggtgtttctgctgggaaagttt
atgaggaaggtcttttttggtcagttgagagctgcagaaatggagcatctcatcgaacgc
tcatggtacgccgtgaccgagacgtgcctggctttcactgtgttcagggatgatttctct
cctcgcttcgtcgccctctttaccctcctgctcttccttaagtgcttccactggctggct
gaggaccgggtggactttatggagcggagtcccaacatatcatgggtttttcacttgagg
gttttatctctcatgggactgttgggtgtcatggacttcctgtttgtcaaccatgcctgt
cacagcatcattacccgaggcgcttcggtccagcttgtgtttggatttgagtatgccatc
ctgctgaccatggtcctgacaacctttatcaagtatcttctgcatactattgacctgcag
agtgagaacccctgggataacaaggctgtctatatgctctacacagacctcttcacaggt
gtggtcaaagtgttcctgtacattgccttcatgaccatcatgataaaggtgcacaccttc
cctctgtttgccatccggcccatgtatttggctatgaggcagttcaaaaaagctgtaaca
gatgctgtaatgtcccggagagccatccgcaacatgaatacactataccccgacgctact
cctgaagatctgcaggcctcagacaacgtctgcatcatctgtcgagaagaaatggtgact
ggagccaagaagttgccttgcaatcacatttttcactccagctgcctgcgctcttggttc
cagagacagcagacctgtcccacctgccgcatggacgtactccgtgctacgaataacaac
cagactccggctccagcccaagctccgcctccagccccggcagcccccgccaacgcccct
gcaaacgcccccgcaggccaaccacctaatgtggctctaggcatgttaccagggtttcct
cccggcatcttccccttctggggtcccttccctgcagtgcttcctcctgctggagcagct
gtacctccagctccagctccaggtgctactgatgctccacaaagcagcacagagtccact
cagacagctagcaccacccagcccacaacatctactgcagattctgctactacagcagca
gctccaggatcagcagtgccaggcttcccattctctttcccccctcctcccttccctgct
gcaccatggctccccatgccaccacctcctccctttgtctcctcgatgcctcctccccct
ccctccttgtcccggctgtcagaagaggagctgagggagctggaggcagagggtcggcgg
ggcctcgaggcccgactccagtgtcttcaaaacatccacaccttgctagacgctgccatg
ctcaacatccaccactacctcagcaccgtcgcaacgctcactcctcctcgggctggcagc
actggagaagccagcgggacgaatcacactgcctcatcttccacagctggcagtaacaca
gagagtcccagcacagagagggacctctccgatcaggtgaacggagcaacggtttcctct
cagtcccctgagtccacttctgttgcttcgggcactgaaagaaaagagaagatggacgaa
ggagtggaggacggagaggatggagagccaaatgctgctgagctgagacgccgccgcctt
cgtaagctagagacaacaccgtcatcgtcgtcatcgcctccctctcctcctccagacaac
tga
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