Oreochromis aureus (blue tilapia): 116328299
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Entry
116328299 CDS
T07295
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116328299 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oau03032
]
116328299 (pola1)
Enzymes [BR:
oau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116328299 (pola1)
DNA replication proteins [BR:
oau03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
116328299 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
116328299
NCBI-ProteinID:
XP_031605906
Ensembl:
ENSOABG00000014149
LinkDB
All DBs
Position
LG9:complement(15648799..15705062)
Genome browser
AA seq
1482 aa
AA seq
DB search
MAPVSNPDKDMDAPDGDDGSEACGLAKTRSRREKREKVGRKSALEQLKKAKMGEKIKYEV
KEFSSVYEEVDEDEYSKMVRERQEDDWIIDDDGTGYVEDGREIFDDDLDDDVVEDKRGKG
GAKGGDSKKNVKKSVVAKPNSIKSLFMNSNVKRPAEKDVDLSKDDLLGDILQDLHSEKPA
LLTPPPVVTLKKKKSVGSPMNPFSIKPQLPKQDSPSAAGLKAKVIRTPPSQSAPRSSVRP
PSSTSASPMAKQKVKVEKLNEEDKNEEEVNDAMAFDEMDFDEPMEVGLEEEAPVVKDDTE
SKPEVAAVTAVKVEAKAEPQDPVLMSSRIGSSWGQEEEGGANDAPAEVQVDSSQLPLVEG
PDGEQVFRFYWLDAFEDPYNQPGVVYLFGKVWIESAKSHVSCSVSVKNIERTMYLLPREY
KTNPRTGEVSNTPVGMMDVYQEFNELSEKFKIMKFKSKKVEKNYAFEIPDVPTQCEYLEV
RYSAEFPSLPSDLKGATFSHIFGTNTSSLEHFLLSRKIKGPCWLDIKSPQLMNQPVSWCK
VEALSLRSDLISVVKDLPPPPLTVMSISLKTVQNPKTHQNEIVSLAALIHYRFHMDKAPP
QPPYQTHFCVISRPADCIFPYDFKEAVRKKNGKVEIASTERTLLGFFLAKMHKIDPDVLV
GHDIFGFDLEVLLQRINVCKVPHWSKIGRLRRSNMPKLGGRSAFAEKNATCGRLVCDVEI
SAKELIRCKSYHLTELTAQVLKTERITVPQEDIKNLYSDSPHLLYLLELTWTDAKLILQI
MCELNVLPLALQITNIAGNVMSRTLMGGRSERNEFLLLHAFHEKDYIVPDKPSFKKAQLE
TAEGEDDVDAGKGKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTT
VQREAQNSRKKKEEDEPEEIPEIPDPNLEMGILPKEIRKLVERRKQVKGLMKQQDINPDL
YLQYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEV
IYGDTDSIMINTNSKCLDEVFKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAAL
VVEPNGEGRFGVKQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSRDVIVENIQKHLVE
LGEKVASGDIPLNQYEIHKALTKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTISYL
ICKDGSNLPASQRAYALEQLQKQENLTLDTQYYLAQQIHPVVSRICDPIEGIDGVLIASW
LGLDPSQFRAQQQFQREEEADGLLGVPVQLTDEERYKDCERFTFTCPQCGTDNVYDSVFE
GAGAKVEPSLMRCCHIPCGGSPADYVVNISNKLVLDIRRHIKRYYAGWLMCEDQACQNRT
RRLPIAFSRHGPICPACSRATLRPEYSEKALYNQLCFYRFIFDWEYAVTKVLNPEERKLV
IKMNQEKEVYRKLKEVPDKALASSGYSEINLAKLFQAFSSLK
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgtcaaaccctgacaaagacatggacgctccggacggcgacgatggaagt
gaagcctgtggtttggcgaagactcgctccagacgggagaaacgggagaaggtggggagg
aagtctgcactggaacagctcaagaaggctaagatgggagagaagatcaaatatgaggtg
aaggagttcagcagtgtgtatgaggaggtggatgaggatgagtactcaaagatggtacga
gagaggcaagaggatgactggattattgatgatgatggaacaggatacgtggaggatgga
cgagaaatttttgacgatgatttggatgatgatgtagtagaagacaaaaggggaaaagga
ggcgccaaaggaggtgactcaaagaagaatgtgaagaaatctgtcgtagccaaacccaac
agcattaagagcctattcatgaacagcaacgtcaagaggcctgctgagaaagatgttgat
ctgtccaaagatgacctgttaggggatatcttgcaggacctgcactctgagaaaccagct
cttctgactcctccacctgtggtgactctaaagaaaaagaaatctgtgggatcacccatg
aatcccttctctatcaaacctcagttgccaaagcaggactcgccctcagcagctgggtta
aaggcaaaagtgattcgaacgccaccatcacagtctgcccccaggtcatcagtccgccct
ccctcctccacatctgcttctcctatggcaaagcagaaggtaaaagtggaaaaactgaat
gaagaagacaagaacgaagaagaagtgaatgatgccatggcatttgatgagatggacttt
gatgaaccgatggaggttggcctcgaggaggaggcacctgtagtgaaagacgacacggag
tctaaacctgaagtagcagcagtgactgcagtcaaagttgaggccaaagctgaacctcag
gacccagtcctcatgtccagcagaattggaagctcttggggacaagaggaggagggcgga
gctaacgacgctccggccgaggtgcaggtcgattccagccaacttcctctggtggagggg
ccagacggggagcaggttttccgcttttactggttggatgccttcgaagacccatacaac
caaccaggtgtggtatacctgtttggaaaagtgtggattgagtctgcaaagtctcatgtc
agctgcagtgttagcgtcaagaacattgagcggaccatgtacctcctacctcgcgaatat
aagacaaaccccaggaccggggaggtgtccaacactccagtagggatgatggatgtgtac
caagagttcaacgagctctctgagaagtttaagatcatgaagttcaagtcgaagaaagtg
gagaagaactatgcgtttgaaattcctgatgtgcccactcagtgcgagtacctggaagtc
agatattctgctgagttcccctcgctgccttctgaccttaagggggcgaccttttcccac
atttttggaaccaatacatccagtctggagcactttctcctcagcaggaagattaaaggc
ccttgctggttggatatcaagtcaccacagctaatgaaccagccggtcagctggtgtaag
gtggaggcgctctctctgaggagtgatttaatctccgtggtcaaagatctcccacctcca
ccactcactgtcatgtccatcagtctcaagactgtccagaaccctaaaactcaccaaaat
gagattgtgtctctagctgcgcttatacactatcgcttccacatggataaagctcctcct
cagcctccgtaccagactcatttctgcgttatcagtagaccagctgactgcatctttcct
tatgacttcaaagaggctgtgagaaagaagaatgggaaggtggagattgcttctacagag
aggaccctgctcggcttcttcctggccaagatgcacaagattgaccctgatgtgctggtg
ggtcatgacatctttggatttgacttggaagttcttctccagcgcatcaatgtgtgtaag
gttccccattggtcaaaaattggacgcctcaggaggtccaatatgcccaaattagggggt
cgtagtgcctttgcagagaagaacgccacctgtggccgcctggtgtgtgacgtggagatc
tcagccaaagagctgattcgctgtaaaagttatcatctgactgaactcactgctcaggtg
ctgaagactgagagaatcacagtcccacaggaagacattaaaaacctctacagtgactct
cctcacctcctgtacctgctggagttgacatggacagacgccaagttgatcctccagatc
atgtgtgagctcaacgtgctgccgctcgccctgcagatcaccaatattgctggaaatgtc
atgtctcgtactctgatgggaggccgctctgagaggaacgagttcctgctgcttcatgcc
ttccacgagaaagactacatcgtccctgacaaaccttctttcaaaaaagcacagctcgag
acggctgaaggcgaagatgatgtggatgcaggcaaaggcaagaggaagaagaaggcagcc
tatgctggaggtttggtgctggatcctaaagttggtttctatgataagtttgtgctgctg
cttgacttcaacagtctgtatccttcaatcatccaagagttcaacatctgcttcaccacc
gtgcagagggaggctcagaactcccggaagaagaaagaggaggatgaaccagaggaaatt
cccgagattccagatcctaacctagaaatgggaatcctgcccaaggaaatcaggaagctg
gttgaacggcgtaagcaggtcaaaggcctcatgaaacagcaagacatcaacccagatctc
tacctgcagtacgacatccgtcagaaggctctgaagctgactgctaacagtatgtacggt
tgcctgggattcagctacagccgcttttacgccaagccacttgctgccctggttacacac
aagggtagggagattctgatgcacaccaaagacatggttcagaagatgaatctggaagtc
atctatggagatactgactctatcatgatcaacacaaacagcaagtgtctggatgaagtt
tttaaacttggcaataaggtgaaggcagaagtaaacaagctgtacaaactattggagatc
gacattgatggtgtgttcaagtctcttttgctgctgaagaagaagaagtatgccgccctt
gtggtggagccaaatggagaaggacgttttggcgtgaagcaagagctcaaagggttggac
atcgtccggagggattggtgtgatctggctaaggaatgcggcaactacgtgattggccag
atcctgtctgatcagagtcgtgatgtcattgtggagaacatccagaaacacctggtggag
ttgggagagaaggtggctagtggagacataccactgaaccagtatgagatccacaaggcg
ctgacaaaggatcctcaggactaccctgataagaaaagtctccctcatgtccacgttgct
ctgtggattaactctcagggtggtcgtcgggtcaaagctggagataccatctcctacctc
atctgtaaagatggctccaacctgccagccagtcagagagcgtacgctctagagcagctc
cagaaacaggagaatctcactctggacacacagtactacctggcccagcagatccaccct
gtggtgtctcgcatctgcgaccctattgagggtattgacggtgtactcatagcctcgtgg
ttgggtctggacccgagtcagttcagagctcagcagcagttccagagggaggaggaagcc
gatggcttgctgggtgttcccgtccagctgactgatgaggagcgctataaagactgtgag
aggtttactttcacctgtcctcagtgtggcactgacaacgtctacgacagcgtctttgaa
ggagctggtgcaaaggttgagcctagtttgatgcgctgctgtcacatcccttgtggaggt
tctccagctgactacgttgtcaacatcagcaacaaacttgtgcttgacatccgtcgccac
atcaaaagatactacgctggctggttgatgtgcgaggaccaggcctgtcagaacaggacc
agacgtttgcccatcgccttctcccggcatggacccatctgccccgcctgcagcagggcg
acactcagacccgagtactcggagaaggccctatacaaccagctgtgcttctacaggttc
atctttgactgggaatacgcagtcacaaaagtactaaatccagaagaaagaaaacttgtt
atcaagatgaatcaagaaaaagaggtctatcggaagctaaaggaagtaccagacaaagcc
ttggcgtccagcgggtactcggagattaacctggccaaactcttccaggctttctcctcc
ctcaagtaa
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integrated database retrieval system
