KEGG   Oreochromis aureus (blue tilapia): 116328661
Entry
116328661         CDS       T07295                                 
Name
(RefSeq) polyadenylate-binding protein 1A
  KO
K13126  polyadenylate-binding protein
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03015  mRNA surveillance pathway
oau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    116328661
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116328661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oau03019]
    116328661
   03041 Spliceosome [BR:oau03041]
    116328661
Messenger RNA biogenesis [BR:oau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     116328661
   mRNA cycle factors
    Stress granule specific factors
     116328661
Spliceosome [BR:oau03041]
 Complex C
  Other components
   Complex C specific factors
    116328661
SSDB
Motif
Pfam: RRM_1 MLLE RRM_10 RRM_5 RRM_3 RRM_occluded HTH_58 POP1_C PABC_AtC3H46
Other DBs
NCBI-GeneID: 116328661
NCBI-ProteinID: XP_031606356
Ensembl: ENSOABG00000007473
LinkDB
Position
LG11
AA seq 635 aa
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKN
LDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMATVRAVPNPVLNPYQPAPPSGYFMAAIPQAQNRA
AYYSANQLAQLRPGPRWATQGVRPQHFQNMPNAMRPTAPRPQPLNTIRAAATTNTQVPRM
MASQRIPTQAVNQRPANASAAAAPVRAMPQYKYAAGVRNTQQHMASQPQVTMQQPAVHVQ
GQEPLTASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKSSTPAGVPSV
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgaatcccagcgcgcctagctacccgatggcctccctgtatgtgggagacctgcaccca
gacgttaccgaagccatgctatacgagaaattcagcccggctggacccatcctctccatt
agagtatgcagagacatgatcacccgtcgctccctaggctatgcctatgtgaacttccaa
cagccagctgacgccgaaagagctttggacaccatgaactttgatgtaataaaaggcagg
cctctccgtatcatgtggtctcagcgtgacccctcgctgaggaagagtggggtgggaaac
atcttcatcaagaatctggacaaatctatcgataacaaggccctgtatgataccttctct
gcatttggaaatatcctgtcctgcaaggtggtttgtgatgaaaatggctcaaagggttac
ggctttgtgcactttgagacccatgaagctgctgaacgggccattgagaaaatgaacggc
atgttgctcaatgacagaaaagtatttgttggacgcttcaaatcgcgtaaagagagggaa
gctgagcttggagcacgagccagagagtttactaacgtttatatcaagaactttggcgag
gacatggatgatgagaagctgaaggagttgtttagcaaatatgggcctgccctcagtatc
cgggttatgactgatgaaagtggcaaatccaagggatttggctttgtcagcttcgagagg
catgaagatgcccagaaggctgtagatgaaatgaatggtaaagaactgaatggcaggcaa
gtctatgtgggccgtgcacagaagaaaggggagcggcagaatgagctcaaacgcaaattt
gagcagatgaaacaggatcgcatgaccagatatcagggtgtcaatctgtatgtgaagaac
ctggatgatggccttgatgacgagcgtctgcgcaaagaattctccccatttggcaccata
acaagtgctaaggtgatgatggagggtggacggagcaaaggctttggctttgtgtgcttc
tcttctccagaagaggccactaaagctgtaacagagatgaatgggcgtattgtggctaca
aagccactgtatgtggcccttgcccagcggaaagaggagcgtcaggctcatctaaccaac
cagtacatgcaaaggatggccactgtccgagctgtgcccaaccctgtccttaacccatac
cagcctgctccaccctcaggatatttcatggcggctatcccacaggctcagaaccgtgct
gcatactactctgccaaccagctggcccagctgcgccccggcccccgttgggccactcaa
ggagtgcgtcctcagcacttccagaacatgcccaatgctatgcgcccaacagcacccagg
cctcagcccttaaacaccatccgtgcagctgccaccaccaacacccaggtcccacgcatg
atggcttctcagcgtatccccacacaggcggtcaaccagcgccctgccaatgcttcagct
gccgcagccccagtgcgtgccatgccgcagtacaaatatgcagctggtgtgcgcaacact
cagcagcacatggcctcccagccacaggtcaccatgcagcagccggcagtccatgtccaa
ggacaggagcctctaactgcctccatgctggctgcagccccacctcaggaacagaagcag
atgctgggtgagcgtctgttccctctgatccagaacatgcaccccagcctggctggcaag
atcaccggtatgctgctggagattgacaactcagagctgcttcacatgcttgagtcacct
gagtcgttgcgctcaaaggtggatgaggctgttgctgtgctccaggcccaccaggccaag
gaggctgctcagaagtcctccacccctgctggtgttcccagcgtctaa

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