Oreochromis aureus (blue tilapia): 116328661
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Entry
116328661 CDS
T07295
Name
(RefSeq) polyadenylate-binding protein 1A
KO
K13126
polyadenylate-binding protein
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03015
mRNA surveillance pathway
oau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116328661
09123 Folding, sorting and degradation
03018 RNA degradation
116328661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116328661
03041 Spliceosome [BR:
oau03041
]
116328661
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116328661
mRNA cycle factors
Stress granule specific factors
116328661
Spliceosome [BR:
oau03041
]
Complex C
Other components
Complex C specific factors
116328661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_3
RRM_occluded
HTH_58
POP1_C
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
116328661
NCBI-ProteinID:
XP_031606356
Ensembl:
ENSOABG00000007473
LinkDB
All DBs
Position
LG11
Genome browser
AA seq
635 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKN
LDDGLDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMATVRAVPNPVLNPYQPAPPSGYFMAAIPQAQNRA
AYYSANQLAQLRPGPRWATQGVRPQHFQNMPNAMRPTAPRPQPLNTIRAAATTNTQVPRM
MASQRIPTQAVNQRPANASAAAAPVRAMPQYKYAAGVRNTQQHMASQPQVTMQQPAVHVQ
GQEPLTASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKSSTPAGVPSV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagcgcgcctagctacccgatggcctccctgtatgtgggagacctgcaccca
gacgttaccgaagccatgctatacgagaaattcagcccggctggacccatcctctccatt
agagtatgcagagacatgatcacccgtcgctccctaggctatgcctatgtgaacttccaa
cagccagctgacgccgaaagagctttggacaccatgaactttgatgtaataaaaggcagg
cctctccgtatcatgtggtctcagcgtgacccctcgctgaggaagagtggggtgggaaac
atcttcatcaagaatctggacaaatctatcgataacaaggccctgtatgataccttctct
gcatttggaaatatcctgtcctgcaaggtggtttgtgatgaaaatggctcaaagggttac
ggctttgtgcactttgagacccatgaagctgctgaacgggccattgagaaaatgaacggc
atgttgctcaatgacagaaaagtatttgttggacgcttcaaatcgcgtaaagagagggaa
gctgagcttggagcacgagccagagagtttactaacgtttatatcaagaactttggcgag
gacatggatgatgagaagctgaaggagttgtttagcaaatatgggcctgccctcagtatc
cgggttatgactgatgaaagtggcaaatccaagggatttggctttgtcagcttcgagagg
catgaagatgcccagaaggctgtagatgaaatgaatggtaaagaactgaatggcaggcaa
gtctatgtgggccgtgcacagaagaaaggggagcggcagaatgagctcaaacgcaaattt
gagcagatgaaacaggatcgcatgaccagatatcagggtgtcaatctgtatgtgaagaac
ctggatgatggccttgatgacgagcgtctgcgcaaagaattctccccatttggcaccata
acaagtgctaaggtgatgatggagggtggacggagcaaaggctttggctttgtgtgcttc
tcttctccagaagaggccactaaagctgtaacagagatgaatgggcgtattgtggctaca
aagccactgtatgtggcccttgcccagcggaaagaggagcgtcaggctcatctaaccaac
cagtacatgcaaaggatggccactgtccgagctgtgcccaaccctgtccttaacccatac
cagcctgctccaccctcaggatatttcatggcggctatcccacaggctcagaaccgtgct
gcatactactctgccaaccagctggcccagctgcgccccggcccccgttgggccactcaa
ggagtgcgtcctcagcacttccagaacatgcccaatgctatgcgcccaacagcacccagg
cctcagcccttaaacaccatccgtgcagctgccaccaccaacacccaggtcccacgcatg
atggcttctcagcgtatccccacacaggcggtcaaccagcgccctgccaatgcttcagct
gccgcagccccagtgcgtgccatgccgcagtacaaatatgcagctggtgtgcgcaacact
cagcagcacatggcctcccagccacaggtcaccatgcagcagccggcagtccatgtccaa
ggacaggagcctctaactgcctccatgctggctgcagccccacctcaggaacagaagcag
atgctgggtgagcgtctgttccctctgatccagaacatgcaccccagcctggctggcaag
atcaccggtatgctgctggagattgacaactcagagctgcttcacatgcttgagtcacct
gagtcgttgcgctcaaaggtggatgaggctgttgctgtgctccaggcccaccaggccaag
gaggctgctcagaagtcctccacccctgctggtgttcccagcgtctaa
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integrated database retrieval system