Oreochromis aureus (blue tilapia): 116328716
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Entry
116328716 CDS
T07295
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116328716 (pdzrn4)
Enzymes [BR:
oau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116328716 (pdzrn4)
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
116328716 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
GRASP55_65
Motif
Other DBs
NCBI-GeneID:
116328716
NCBI-ProteinID:
XP_031606432
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Position
LG17
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AA seq
816 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGLAKVEHDEAVVEAIRRDPIVVQVLRRTPTRAAAA
VVHNSSTSSPQDVCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHTM
EHEFYECPEYLSNTTADVERIVEYEYEEVELCRQNSQEKLGLTLCYRTDEEEDTGIYVSQ
VEPNSIAAKDGRIKEGDRILQINGCEVQDREKAVALLSSEEARSITLLVTRPEIQLDEEA
GWLDDEQQELMEEILEERRKQKEHGFDKGDEHQAEEGMTTDTATCSSNNQDSGFGRSTDS
PEHQPLLAKLQRRSPAHCLRERWRAEHPHTRRGAVVPRENQSTRTLSTGQGHEGVGSVRN
SGGGILGLENRFQQLLELKCQIRNGGECGVYSIRHSIECSLTEQGGEDGDCVDDIGGGGG
VEQELRMLNEELRSIELECQSIMQAHQLRQSYQQEHSQPSPCSPGRSTKDGHKRHGRLAD
IHEHPERLEADKMREKDSSSAYNTAESARSTPLGMERSPDHSLQRHISITNQKNLRLASS
TPSSPIPIPKPQGTSSRSRQADPGPVISSSPDQSNPSRSESDPALPADDERCEKKGRTRD
SRRRLPYASSYHTTPYHGQGGSKQLQSYMQLLQQHSSVEYSQSQLSLLSVCRDPVHRNGR
PGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKMGRY
WSKEERKQHLARAREQRKRREFMQKSRLECLKEGPVSGAEGRKEINILELSHKKMMKKRN
KKILDNWMTIQELMSHGARVPEGSKVHNAFLSVTTV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctctacgag
atcgcacaggtgaatggtttggccaaggttgaacatgatgaggcagtggtggaggccatc
aggcgagaccctatcgttgtccaggttctccgacgtacccccaccagagccgcagcggct
gtcgtacataacagcagcaccagctcgccgcaggatgtgtgtgtggttgatgtgtgcacg
caaacagacatcacctttgaacatattatggcactggccaagcttcggcctgctacccca
ccagttcctgacatttgtcccttcctgctgtctgacagctgtcactcaatccacaccatg
gaacatgagttttatgaatgtccagagtacctgtctaacaccacagcagatgtggagagg
atcgtagagtatgagtatgaggaagtggagctatgcaggcagaacagccaagaaaagctg
ggcctgacactgtgctacaggactgatgaggaggaggacactgggatctatgtgagccag
gttgagccgaacagcatagcagcgaaagatgggcgcataaaggaaggagatcgtattctg
cagataaatggctgtgaagtacaagacagagagaaggctgttgccctgttgtcaagtgaa
gaagcaaggagcatcacactactggtgacaaggccagaaatccagttggatgaggaggct
ggatggctggatgatgagcaacaggagctcatggaggagatcctcgaggagaggaggaag
cagaaggaacatggctttgacaagggagatgagcatcaagctgaagaaggcatgacaaca
gatacagctacatgttcttccaacaatcaagacagtgggtttggacgcagtacggacagt
ccggagcaccaaccactgctggctaaactccaaagaaggagcccagctcattgcctaagg
gagcggtggcgggcagagcatccccacaccaggcgaggagctgttgtcccacgggaaaac
cagagcacgagaacactgtccacaggccaaggccacgaaggggtagggagtgttcgcaat
agtggaggtgggatcttgggtttggagaatcgtttccagcaactcttggagctcaagtgt
cagatccgaaacgggggtgagtgtggggtgtactcaattcgacacagtatagagtgtagc
cttaccgaacaagggggggaggatggcgattgcgtagatgacatagggggcgggggaggg
gtggagcaggagttgaggatgctaaacgaggaactgcgcagcattgagctcgaatgccag
agcattatgcaggcccatcagctccgccagtcctatcagcaggagcactcacagccgtcg
ccctgttccccaggaaggagcaccaaagatggacacaagcggcacggcaggctggctgac
attcacgaacacccagagaggttggaagccgataagatgcgcgagaaagatagctccagt
gcctacaacacggcagaaagtgcacgctcaacaccactgggtatggagagatctcctgac
cactctctgcagagacacatcagcattaccaaccagaaaaacctcagactggcttcttcc
acaccctcaagccctattcctatccccaagccccagggcacatctagtcgtagcagacaa
gcagatccaggtcctgtaatctcaagcagccctgatcagagcaacccttccaggtctgag
tcggaccctgctctgcctgcagatgatgagaggtgtgagaagaaagggaggaccagagac
tcaaggagaaggcttccttacgcttcttcatatcacacgaccccttatcatggccaggga
ggatctaagcaactccagagctacatgcagctgctacagcagcattcatccgtggagtat
tctcagagccagctgagtctcctcagtgtctgccgagatcccgtgcaccgtaacggacgc
cctggggaaccacgactagagtggaaggtcaaagttcgagctgacgggacgcgatacgtt
gcccggaggcctgctcgtgatcgcatactgagggagagggcgctaaggatcagagaggag
aggagcggaggcatgaccacagatgatgacgccatgagtgagatgaagatgggccgctac
tggagcaaagaggagaggaagcagcacctggcacgagccagggagcaaagaaagaggagg
gagtttatgcaaaagagccgcctggagtgtttaaaggagggaccagtgagtggagctgaa
ggcaggaaggagatcaatatcttggagctcagtcacaaaaagatgatgaagaaacgaaat
aaaaagatcctggataactggatgactatccaggagctgatgagccatggggccagagtc
ccagagggctccaaagtccataatgcctttctttctgtcacaactgtttaa
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