Oreochromis aureus (blue tilapia): 116329083
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Entry
116329083 CDS
T07295
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oau00536
]
116329083 (slit2)
Glycosaminoglycan binding proteins [BR:
oau00536
]
Heparan sulfate / Heparin
Axon guidance molecules
116329083 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
Laminin_G_1
LRRNT
LRR_9
LRRCT
EGF_TEN
LRR_1
hEGF
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
Laminin_G_3
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
116329083
NCBI-ProteinID:
XP_031606877
Ensembl:
ENSOABG00000016631
LinkDB
All DBs
Position
LG6:22200465..22303903
Genome browser
AA seq
1557 aa
AA seq
DB search
MVGARCPVGPHRSPVTVLGLLVTVLVLSSGADGQPCPAQCSCTGTTVDCHGQGLRSVPRN
IPRNTERLDLNANNLTKITKTDFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRLNR
NNLAVFPELLFLGTTKLYRLDLSENQIQGIPRKAFRGAVEIKNLQLDYNHISCIEDGAFR
ALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRLGL
YTQCMAPPHLRGHNVAEVQKKEFVCTGHQSSSSSSCSVLQCPESCTCSNNIVDCRGKGLT
EIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRSLNS
LVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQTIA
KGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQIK
SKKFRCSGNEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTTELRL
NNNEFSVLEATGIFKKLPQLRKINLSNNRITDIEEGTFEGASGVNELILTSNRLENIHHR
ILKGLSGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSMNPGAFDTLHSLSTLN
LLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQSPYFLKEIPIQDVAVQDFACEDGNDENS
CSPVLRCPAECSCLDTVVRCSNKGLTTLPRGLPKETTELYLDGNHFTQVPVELSNYKHLT
LIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPERAFDGLKSLRLLSLHGNDISLI
PEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCAGPGDMTDKLLLTT
PSKKFTCTGPVDINIQAKCDPCLSNPCKNDGTCANDPVHYYRCTCPYGFKGQNCDEPIHA
CISNPCQNGGTCHLKEGEGSNFWCVCPEGFEGDACEINIDDCEDNDCENNSTCVDGINNY
TCMCSPEYTGELCEEKLDFCAPELNPCQHDSKCILIPQGYKCECIPGFIGEHCELDYDDC
EENKCQNGGQCIDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNHECLNGAQCVIVG
SDPRCQCLHGYEGERCETLASVNFVNRESYLQLPSSLLSPQTNISLQIATDEDSGVLLYK
GDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGNFHAVELVASDQTLSLSIDGGP
PKSINSLNKQSTLNIDSPLYVGGMPERASASGGLSALQHSSGGRNGTSFHGCLRNLYING
KLQDLGAGLEAGLPGSGTTQSTTRKWLGNGVEPGCQPCQRGACVQGDCHPTGHRGFTCTC
HAGWTGTLCDQQVSNPCDGNKCIHGTCIPINSYSYSCRCQPGFAGVLCDEQDQDAANPCS
LSRCKHGKCRVSGLGKAYCECNSGYTGEACDREVACRGERVRDVYQRQQGYAACQTQEKV
SRLECRGSCPGGAEGQGTCCTPLRSKRRKYTFQCTDGSSFVQEVEKVVKCGCTKCSL
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctcggtgccccgttggccctcaccgctccccggtgactgtgctggggctg
ctggtgactgttctggtcctgtccagcggagcggacggtcagccatgcccggcccagtgc
tcctgcaccggtacgacagtggactgtcacggacaaggactgcgcagcgtgcccagaaac
atacctcgaaacacggagagactggacctgaatgcaaacaacctcactaaaatcacgaag
acggatttcgcagggctgaggcatctgcgagtgctgcagttaatggagaacaaaatcacc
acaatcgagagaggagccttccaggacctgaaggagctggagagactgcgcctgaatcgg
aataatctggctgtctttcccgagctgcttttcctgggaacaacgaagctttacagactt
gatctcagtgaaaaccagattcagggaattccaaggaaagccttcaggggagctgtggaa
atcaagaacctccagttggactacaaccacatcagctgtattgaagatggagctttcaga
gcgctacgtgacctggaagtactcaccctgaacaataacaacatcagccgactgtctgtg
gccagtttcaaccacatgccaaagctcaggaccttccgcctgcactccaacaacctgcag
tgtgactgccacgtagcctggctgtcagagtggctgcgacagcgcccccggctgggtctt
tacacgcaatgcatggcccctccgcacttgagggggcacaacgtggccgaggtgcagaag
aaggagtttgtgtgcacaggtcaccagtcgtcatcatcttcctcctgcagtgtgttacag
tgtccggagtcgtgcacctgcagtaacaacattgtggactgtagagggaagggtctcaca
gaaatacccaccaacctgcccgaaaccatcaccgagatacgactggagcagaacgccatc
aaggtgataccagctggggccttttctccttataagaagctgcgcaggatagacttgagt
aacaaccagatatcagagctggcctcggatgccttccaaggtctgcgctctctcaactcg
ctggtactatatgggaacaaaatcaccgagatctccaaaggactctttgaggggctgttc
tctctgcagctactgttactgaatgctaataagatagcatgcctgcgtgtggacgcattt
caggaccttcacaacctcaatctgctatcactgtatgacaacaagctccagaccatcgcc
aaggggactttctcatctctaagagccatacaaacacttcacttggcacaaaaccccttt
atctgtgactgccatctgaagtggctggcagactacctgcaggacaatcccatcgagacg
agcggcgcccgctgcaccagccctcgacggctcgccaacaaacgaatcgggcaaatcaag
agcaagaagttccgctgctcaggtaacgaggattaccgtagtaagctaggaggcgactgc
ttcgcagacctggcctgtcccgaaaagtgtcgctgcgagggcaccaccgtcgactgctcc
aaccagaagctcaccaaaatacctgatcacattcctcaatacaccaccgagctgcgtctg
aacaacaatgaattcagtgtgctcgaggcgacggggatcttcaaaaagctgcctcagctg
aggaagattaacctgagtaataaccgtatcactgacatagaggagggaacgtttgaagga
gcttcaggggtcaatgagctgattctgacctccaacagactggagaacatacaccaccgc
atactgaagggactcagtggcctccgcacactcatgctgaggagcaaccgcatcagctgt
gtgagcaacagcagcttcgtggggttgagttcagtgcgtctgctgtcactctatgacaac
cagattacctccatgaaccccggagccttcgacacgctgcactccctgtccacactaaac
cttctggctaatccttttaactgcaactgtcacctggcttggcttggtgattggttgaga
aggaaacgcatcgtcaccggtaacccccgctgccagagtccttacttcctgaaggagatc
cccatccaggatgtagctgtccaggactttgcctgtgaagatggtaatgatgagaacagc
tgctctccggtgctgaggtgtccagctgagtgttcctgtctggacaccgtggtccgctgc
agcaacaaggggctcaccacgctgcccagaggcctgcccaaagagaccaccgaactgtat
ttggatggaaatcacttcactcaagttcccgtggagctctccaattacaaacacttaacg
ctcattgatttgagtaacaaccagatcagcacgttgtccaaccacagcctcagtaacatg
tccgagctgcttaccctaattctgagctacaaccggctgcgatgcataccagagagggcg
ttcgacggacttaaatctctccgtttgttgtctcttcacggtaatgacatatcactgata
ccagaaggagccttcaaagacctgtcatcgctttcccacctggctctgggcgccaaccct
ctgtactgtgactgtcacatgcagtggctgtcagactgggtgaagagcgggtataaggag
cctggcattgctcgctgtgcagggcccggcgacatgacggacaaacttctactgactaca
ccctccaagaagttcacttgtacaggcccagtggatataaatatccaggctaagtgtgat
ccctgcctgtccaacccctgcaagaacgacggcacatgtgccaatgaccctgtgcactac
taccgctgcacctgcccttatggatttaagggccaaaactgtgatgaacccattcacgcc
tgtatcagtaacccgtgccagaacggtggaacctgccatctgaaggaaggagaaggcagc
aacttttggtgtgtgtgtccggagggcttcgaaggtgacgcgtgtgagatcaacattgac
gactgcgaagataacgactgtgagaataactccacctgcgttgatgggattaacaactac
acatgcatgtgttcaccagaatacacaggggagctgtgtgaagagaaactggacttctgt
gccccagagctgaacccatgtcagcacgactcaaagtgcattttgattccgcagggatac
aagtgtgagtgcattccaggcttcataggcgagcactgtgagctggattatgatgactgt
gaagagaataagtgtcagaatggcggtcagtgcatcgatgccgtcaatggatacacctgc
atctgtccagaagggtacagtgggttattctgcgagttctctcctccgatggtccttcct
cgcaccagcccctgtgacaaccacgaatgcctcaacggggcacagtgcgtcattgtagga
tcagacccccgctgccagtgtctccacggctacgagggcgagcgctgtgagactctcgcc
agtgtcaacttcgtcaaccgcgagtcatacctgcagctgccctccagtctcctctcacca
cagaccaacatcagcctgcagattgctaccgatgaggacagtggtgtgttgttgtataaa
ggggataatgatcacattgccatggagctgtacaggggacgcctcagggtcagctacgac
actggatcctatcctccttctgctatatacagtgtggagacagtgaatgatggtaatttc
catgccgtggagttagtagcatcagatcagactctgtctctgtccatcgatggcgggccg
cccaaatccatcaactccctcaacaagcagtccacactcaatatagattctccactttat
gtgggagggatgccagagcgagcctcggcttctggcggtctgtcggccctacagcacagc
tcgggtggccgtaacggcacaagcttccatggctgcctccgtaacctctacatcaacggg
aagctccaggatctaggagctgggcttgaagcggggctcccaggatctggaaccacccag
agtaccaccagaaagtggttgggcaatggggtggagccgggctgtcagccgtgccagaga
ggggcctgcgtccaaggtgactgccacccaactggacaccgcggtttcacttgtacatgc
cacgcaggctggacgggaactttatgtgaccagcaagttagcaacccctgtgatggcaac
aagtgtatccatggtacctgcatcccaatcaactcctattcctactcctgccgctgccag
cctggctttgctggtgtcctctgtgatgagcaggaccaggatgcagctaacccctgcagc
ctgtctcgctgcaaacatggcaaatgtagagtgtcaggcctgggcaaggcgtactgcgag
tgtaacagcggatatacaggagaggcgtgtgacagagaggtggcctgccgaggggaacgg
gtccgagatgtctaccagagacagcaaggctacgcggcgtgccaaacccaggagaaggtc
tcccgtttagagtgtcgaggcagctgcccggggggagcagaaggacagggcacctgctgc
accccccttcgcagcaaacgcaggaaatacaccttccagtgcactgacgggtcttctttt
gtccaggaagtggagaaagttgtcaagtgcggctgtacaaagtgttctttataa
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integrated database retrieval system
