Oreochromis aureus (blue tilapia): 116329345
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Entry
116329345 CDS
T07295
Symbol
si:ch211-114c17.1
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116329345 (si:ch211-114c17.1)
Spliceosome [BR:
oau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116329345 (si:ch211-114c17.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
HAT_Syf1_CNRKL1_N
TPR_19
HAT_Syf1_CNRKL1_C
TPR_16
TPR_2
TPR_11
TPR_12
HrpB1_HrpK
TPR_MalT
TPR_21
GAT
Motif
Other DBs
NCBI-GeneID:
116329345
NCBI-ProteinID:
XP_031607241
Ensembl:
ENSOABG00000013643
UniProt:
A0A668TS58
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All DBs
Position
LG2:complement(15205482..15215912)
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AA seq
724 aa
AA seq
DB search
MAAAEGCEEMSGNGELVESSAMEAPEVPAPPLPEITEENGSAAVVPEAPVGPDPASFSMQ
PAAVDEEGELPADFERLWKAAHDNPQDFTSWTDLLQYCEQEGHLTASRRALEAFLVRYPL
CYGYWKKFADLERRVGLNDKAEEVCIQGLQAIPLSVDLWIHYINLLLGTLDMNLPESPKR
IRSVFEDAVAAAGLDFHSDRLWDLYVEWEKEQGNMKNATAVLDRVLRVPTQLYNTHYDKF
KEHLNSHEPKEVLSPEEYEELRELCRQSQKAERAEQAQEEEKERPPGEEEPATPEGTDTE
ELMQKIREQVLLRRDKVYQDNEGEVRKRWHFEDAIKRPYFHVKPLDRLQLRTWHSYLDWE
ITEVNKDTKDPSQDPNQATEESEVTAPPQEPSEGAIVAQDDHRVRILFERCLIACALYEE
FWSRYIQYLEPQSVDEARAVYKRACEIHLAYKPNIHMHWATFEERHGDLTEARRVLEALE
KKLPGLAVVRIRRAALERRAGQLDQSEALLREAVAESKEKPTLHAFYSIKLARLLLKLGR
DPSSARRVLQEALEISPDNDKLHMNLLELEVSGDPWASAEAVQECVTRALAAPLEPHTKI
LFSQRGLQFAEDYSNSIQSVLSVYEEHQKLLKELGGTKREAENGDEDPEKLSKTDDGSAV
AVSAQVPPTMPHVPITTPPPPVMGTDMSAQAGYGGYSSWYQQPQYGSYGYQNTWNYNQGY
YPPS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggagggctgtgaggagatgagcggcaacggggagctggtagagtcttca
gccatggaagctcctgaggttccggcgccacctctacctgaaataacggaagagaacggc
agtgccgccgtggttcctgaggctcctgttggccccgaccctgcttccttctccatgcaa
ccagccgcagtggatgaagaaggggagctacctgcagactttgagcgtctgtggaaggcc
gctcatgacaatcctcaagacttcacctcctggactgacctgctgcagtactgtgagcaa
gagggtcacctcacagcttcacgtagagcactagaagccttccttgttcgctatcctctc
tgctatggttactggaagaaatttgctgatctggagcgccgcgttgggcttaacgacaaa
gcagaggaggtgtgcattcagggtctgcaggcaatccctctcagtgtagatctgtggatc
cactacatcaatctgctgctaggaacactggacatgaacctacctgagtcacccaaacgg
attcgcagtgtgtttgaggatgctgtcgcagcagccggtttagacttccactcggaccgg
ctttgggatctgtatgttgagtgggagaaggagcaggggaacatgaagaacgcaacagcc
gtcctggacagagtcctcagagtccccacacaactctacaacacccactacgacaagttt
aaagagcatctgaacagccatgaacctaaagaggtgctttctccagaggagtacgaggag
ctgagggagctgtgccgtcagagccagaaagcggaacgagccgaacaagcgcaggaggag
gagaaggagaggccgccgggtgaggaagagcctgccacacccgagggcacagacacagag
gaattgatgcagaagattagggagcaggtgttactacgcagggacaaagtgtaccaggac
aacgagggagaagtccggaagagatggcactttgaagatgccatcaagcgaccgtacttc
catgttaagccacttgatcgcctccagctccgcacttggcactcatacctcgactgggag
atcacagaggtgaacaaggacacgaaagaccccagtcaagatccaaaccaggccacagag
gagtcggaggtcacggcccctccacaggaaccatcggagggtgctatagtcgctcaagat
gaccacagagttcgcatcctctttgaacgttgcctgatcgcctgcgcactctatgaggaa
ttctggtccaggtacatccagtacctggagccgcagagcgtggatgaggcccgggcggtt
tataaacgagcctgtgaaatccacctggcatacaaacccaacatccacatgcactgggcg
accttcgaggagaggcacggtgacttaactgaagctcggcgggtgttggaggccctggag
aagaaactgccaggtttggcggtcgtccgtatccgcagggctgctttggagagacgagcc
ggccagctggatcagtcggaagccttgctgagggaggcggtggctgaatccaaagagaag
cccacgttacacgctttctattcaatcaagctggctcgactgctgctgaaactgggcagg
gaccccagcagtgcccgcagagttttacaggaagcgctggaaattagtccggataatgat
aaactgcacatgaatctgttggagctggaggtttcaggtgacccgtgggcctcagccgag
gcggtgcaggagtgtgtgacacgagctctggcagctcctctcgaacctcacaccaagatc
ctcttctcacagaggggcttacagtttgcagaggactacagcaactctatccagagtgtg
ctgtctgtctacgaggagcaccagaagctgctgaaggagctcggtggaacaaagagagaa
gcagagaacggggatgaagatccagagaagctgagcaaaactgatgacggctctgctgtg
gctgtgtctgcacaagtcccacctaccatgccgcacgtccccatcaccacaccgcctcct
cctgtgatgggcaccgatatgagcgcacaggctggatacggaggatacagcagctggtac
cagcaaccgcaatacggcagctacggctaccagaacacctggaactacaaccagggctac
tatccaccgagctag
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