Oreochromis aureus (blue tilapia): 116329608
Help
Entry
116329608 CDS
T07295
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116329608 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116329608 (smarcd2)
03036 Chromosome and associated proteins [BR:
oau03036
]
116329608 (smarcd2)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116329608 (smarcd2)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116329608 (smarcd2)
PBAF complex
116329608 (smarcd2)
GBAF(ncBAF) complex
116329608 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
116329608
NCBI-ProteinID:
XP_031607515
Ensembl:
ENSOABG00000014123
LinkDB
All DBs
Position
LG8:complement(16403661..16414556)
Genome browser
AA seq
501 aa
AA seq
DB search
MASRGSFTGPPMNPSMSPMNVGHAAGMRMQGMPQPPGGYPRSMSSIPQYPQRPGMPSSRV
GGPMGSMGGQLPGPSYGSSSIPMRAGMGPPSMDASRKRFLHQQQQQQEVLGGLRRGAKRR
KMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYI
SNTYTPSKPEGEEAEKVSSWELRVEGKLLEEAGKQKRKFSSFFKSLVIELDKELYGPDNH
LVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAS
IMQALWLYIKNNKLQDSHEKEYINCNRYFRQIFGCPRMRFSEIPMKLAGLLQHPDPIIIN
HVISVDPTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALEMKIHETIEYINQL
KTERDFMLSFSNNPQEFIKDWLKSQSRDLKLMTDVTGNPEEERRTEFYHEPWVPEAVGRY
VYSKVQQRRQELEQVLGIRLT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaggggaagcttcacaggtcctccgatgaatccgagtatgagccccatgaat
gttgggcatgccgcgggcatgaggatgcaaggaatgccccagcctccggggggatatccc
agaagcatgagcagcatcccccaatacccccagcgccccgggatgccatccagcagagtg
gggggccccatggggtcaatggggggtcagctgcctggtccctcttatggtagcagtagc
attcccatgcgggcaggcatgggacccccgagcatggacgcctctaggaaacggtttctt
catcagcaacagcaacaacaagaggtgctgggaggcctcagacgaggagcaaaaaggcgc
aagatggctgacaaggttctgccacagaggatccgagatctggtcccggagtcccaggcc
tacatggacctcctggcctttgagaggaagctggaccagaccatcgctcgaaagcgtatg
gagattcaggaagccatcaaaaagcccattatgcaaaagcgcaagctcaggatctacatt
tccaacacgtacactcccagcaaacccgagggtgaggaggcggagaaggtgtcctcctgg
gagctgagagttgagggcaaactcctggaggaagctggcaagcagaagaggaagttttca
tctttcttcaaaagcttggtgattgagcttgataaggagctctacgggcctgacaaccac
ttagtagagtggcacagaatgcccaccactcaggagacggatggtttccaggtcaaaagg
ccaggagacgtgaatgttaaatgcacccttctgctcatgctcgaccaccagccccctcag
tacaaactggatccacggttggctcgccttctgggtgtacacacacagacacgagccagc
atcatgcaagctctctggctttacatcaagaacaacaagctgcaggacagtcatgagaag
gagtacatcaactgcaaccgctatttcagacagatctttggctgtccacgcatgaggttc
tctgagattcccatgaaactggcgggcctgctgcagcaccctgaccccattattatcaat
cacgtcattagcgtggatcccaccgatcagaagaagactgcatgctacgacatcgacgtg
gaagtggacgacccacttaagggccaaatgaacagcttcctgtcttctacaaccaaccag
caagaaattgctgccctcgagatgaagattcatgaaaccattgagtacattaaccagctg
aagaccgaaagagatttcatgctgagcttcagcaataatccacaggagttcatcaaggac
tggctgaagtctcagtccagggatctgaagttgatgacagatgtgactggaaacccagaa
gaggagaggaggaccgagttctaccatgagccctgggtgccagaggcagtgggcagatat
gtttactccaaagtgcagcagagaagacaagagctggagcaggtgttgggtatccgactc
acctaa
DBGET
integrated database retrieval system
