Oreochromis aureus (blue tilapia): 116329636
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Entry
116329636 CDS
T07295
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116329636 (scrib)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
116329636
NCBI-ProteinID:
XP_039473251
Ensembl:
ENSOABG00000019549
LinkDB
All DBs
Position
LG9:22785586..22864206
Genome browser
AA seq
1793 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQTVPDEIFRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDISEIPESIKFCKALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPSELK
GLLALTDLLLTQNLLEVVPDSIGSLKQLSILKVDQNRLTHLTDSIGECENLTELVLTENL
LQSLPRSLGKLKKLTNLNVDRNRLGSVPKELGGCASLNVLSLRDNRLGKLPAELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SPSLENLLQNSVDGSWTDSNLNRVSVIQFQEETKAEVDEDDEAAAERRGLQRRATPHPSE
LKEMKKGIEERRNEAYTSRQDEDQSLDPQEKRLSDLSNQSHDSQVSNSTLSATSHEDRQN
VTEASHMENRVDGPSPQDEDDLDEMEVEYIEPTVHFAEEPIIRGGDEEHEEDGEDDERSD
EEDKRPMEKRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFSPDALNSSTQAAEDEEDEE
EEQSDGTPQHRHRVEEAEDSRHQVNSSQVKGVSFDQVNNLLIEPARIEEEEHTLTIVRQT
GGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGVKVGDKLLEVNGVDLHEAEHHT
AVEALRSSGATVSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSSGLAFNLENSPSGP
RQRFSTCLIRNDKGLGFSIAGGKGSTPYRTGDTGIYISRIAEGGAAHKDSTLRVGDRVIS
INGVDMTEARHDQAVALLTGTSPTIALLVERDLNAPGGSPGQSRARAHSPPPPEPSDSPD
QDEEGLGNHLSRMQDEYPIEEVTLVKSGGPLGLSIVGGSDHASHPFGINEPGVFISKVIP
HGLASQCGLRVGDRILEVNSIDLRHATHQEAVRALLANKQEIRMLVRRDPSPPGMQEIMI
QKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSTGAAARDGRLQVGMRILEVNNH
SLLGMTHTEAVRVLRAVGDSLVMLVCDGFDPRKVAAVEASPGIIANPFATGIVRKNSMES
ISSIDRDLSPEEMEIIQKESEMVRETSQWEREEMEKVERMRLEREEATRLLEEETENIGT
GPLKLDYKTLAALPTTSLQKVSRAPSSDFTRTESPIREAPYSPTIQPANIHYTSTPTVKD
NTSSSTRPGAIQPVGRVRPSNSPATPDGHSPNPFQHGPSPFNSQTSDLYGTRNNFQPKQP
SPEPDLNNEVFDDTDGREGAGEGLTGKVSPRQPLLSDRREYMSFAAVPRRSTPSMDLQSP
SFGGKHSPEQRSFRDRQKYFEIDVKQQTPEKPKPRVSLVGEDDLKKMREEEERKFEQRAR
EYLMDDDDEDEDEEDLAKQVAQMKATGKVLLDGVEYKVEPVSTPSQHCSTPPNYSSGPSS
VDGKGDSQRNSLEDSFRLEQRPNSMTGLIPAYPGESAAPIRTAKAERRHQERLRMQSPEL
AVAPDKDLSPAEKRALEAEKRAMWRAARMKSLEQDALKAQMVIAKSRDGKKRGTLDQLTE
SPSPAPTPSPTPMEELSPRGLTSPGRLSVSTKKFDYRQFAAIPSSKPVYDIQSPDTTDTE
LKFMDDGSSNPGTAASPDVTPLPATSALEEMALYSNKRKLRQGRRSLETAVPT
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgctgcaaccgccacgtcgagtcggtggacaagcgg
cattgcaacttgcagacggttcctgatgaaatatttcgatacagccgcagtttggaggag
cttctccttgatgccaaccaactcaaagagctaccaaagcctttcttcagactactgaac
ctccggaaactcggcctgagcgacaatgagatccagagactcccgcctgaggtggctaac
ttcatgcaactggtggaactggacatctccaggaacgatatttctgagatcccagagagc
attaagttttgcaaggccttggagattgcagacttcagtggaaaccccctctccagattg
ccggatggtttcactcaactccgagcgctcgctcacctggccctcaatgatgtgtcatta
cagacgttgcccaacgacattggaaatttggccaacctggtgacgttggagctcagggag
aacctgttgaagtctctgcccacgtcgctctctttcctggtgaaactggaacagctggac
ctgggcagcaacgaactggaagttttgccggataccctcggcgctctccccaacctaagg
gagctgtggctggaccgtaaccaattgtcctcattaccaccagagctgggaaaccttcga
aggttggtgtgtctggatgtgtcagagaatcgtctggaggagctcccctcagagctgaaa
ggcctcctggctctcacagacctgctgctcacacagaacctgctggaggtcgtcccggac
agcatagggtctctgaaacagctgtccatcctgaaggtggaccagaacagactgacccat
ctgactgattcaataggcgagtgtgaaaacctcacagaacttgtcctgacggagaacctg
ctacagtcgcttcctcgctcgctgggcaagctgaagaagctgaccaacctgaatgtagac
cgcaaccggctgggcagcgtgcccaaagagctgggcggctgtgccagcctcaacgtcctc
tcactgagagacaatcgcctgggcaaactgcctgctgagcttgcagatgccacggagctg
catgtgctggatgtggctggaaacagattacaaaacttgcctttcgccctgacaaacctc
aacctgaaggccatgtggctcgcagagaaccagtctcagccaatgctcaagttccagacg
gaggacgatgagcgaacaggagagaaagtgttgacctgctatttgctaccccagcagcct
tccccaagcctagagaacctgctgcagaacagtgtagatggtagctggacagacagcaac
ctgaacagagtgtcggtcatccagttccaggaggagaccaaggctgaggtggatgaggat
gatgaggctgctgcagagcgtagaggccttcagcgcagagccacaccacatcccagtgag
ctgaaggagatgaagaaagggattgaagagaggaggaatgaagcctacacatccagacag
gacgaggatcagtccctggacccacaggaaaaaaggctcagtgacctctccaatcagagc
catgactcgcaggtgtctaacagcacgctgtcggccacctcccacgaggacagacaaaat
gtgactgaggcctctcacatggagaaccgtgtggacggcccttcccctcaggatgaggat
gaccttgatgagatggaggtggagtacattgagcccactgtgcactttgcagaagaaccc
atcatccgaggtggggacgaggagcacgaagaggatggcgaggacgacgagaggagtgac
gaggaagacaagaggcccatggagaaacgtctgataagaaaggacacaccacactacaag
aagcacttcaaaatcaccaagctgcccaaacccgaggctgtggccgctctgctacagggc
ttcagtcccgacgccctcaactcttctactcaggctgccgaggacgaggaggatgaggag
gaagagcagagtgatggcactcctcagcaccgccacagagtggaggaggcagaggacagc
cggcatcaggtcaactccagccaagtaaagggggtgtcatttgatcaagtcaataatctg
ctgattgaacctgctcgaattgaggaggaagagcacaccctcaccatcgtgcgacaaaca
ggcggcctgggcatcagcattgctggtggaaaaggatcaacgccttacaaaggagatgac
gagggaatcttcatctccagagtgtctgaagacggtcctgcagccagagctggagttaaa
gtgggagacaaactgctggaggtaaatggagtggacctccacgaagctgagcatcacaca
gcagtggaagctctccgcagctccggtgctacagtctccatgacggtgctgcgggagcgc
atggtggaaccagagaacgccatcaccaccacgccgctgaggcccgaggacgactacttc
ccacgggagaggcggagcagcggccttgccttcaatttggagaacagtccaagtgggccg
aggcagcggttctccacctgcctcatccgtaatgacaaggggctgggattcagcattgca
ggggggaaaggctccacgccgtaccgcacaggggacacgggaatctacatctctcgaatc
gcagagggcggagcggcacacaaagacagcacgctgcgtgtgggcgacagggtgatctct
atcaatggtgtagacatgacagaggccaggcatgaccaggcagtagcgctccttaccggc
acctcccccaccatcgccctcctggtggagcgtgacttgaatgcaccagggggctctcca
ggtcagtcccgggcacgagcccactcccctccacccccagaaccatcagattctccagac
caggacgaggaaggcctcgggaaccatctgagccggatgcaggacgagtatcccatcgag
gaagttaccctggtgaagtctggaggccctctaggcctgagtattgtaggaggcagcgac
catgccagccacccttttggcatcaacgaacctggggtgttcatctcaaaggtgattcct
catgggttggcaagtcaatgtggcctccgtgttggcgaccggatattagaggtgaacagc
attgacctgcgacatgccacacaccaggaagctgtgcgggccttgctggccaacaagcag
gagatccgtatgttggtacggcgggacccttcaccgccaggaatgcaggaaatcatgatc
cagaagcagcctggagagaagcttggtatcagcattcgcggaggggccaagggtcatgct
ggaaatcctttcgaccccacagatgagggcatcttcatctcaaaggtgagttcgaccggc
gcagcagcaagggacggccggctgcaggttggcatgcgaattcttgaggtgaacaaccac
agcctgctggggatgacgcacacggaggcggtgcgagtgctccgtgctgtcggggactct
ctggtcatgctggtttgtgatggctttgaccctcgcaaagtggctgcagtggaggcatct
ccgggtatcattgccaacccatttgcaaccggtattgtacgaaagaacagtatggagagc
atttcttctatagaccgagatctaagcccagaggagatggaaataatacagaaggagtct
gagatggtgagagagacatcacagtgggagcgagaagagatggagaaagtggagcgaatg
cgcttggagcgtgaggaggcaactcgcctgctagaagaggagactgagaacattggcact
ggaccgctaaagctcgactacaaaacgctagctgcgctgcccaccacgagtctgcagaag
gtcagcagggcgccttcctctgatttcaccaggacggaaagcccaatcagggaagcccct
tactctcctactatccaaccggcaaatattcattacacctccactcccactgtcaaggac
aacacctcatcatcaacgcgaccaggtgccatccagccagtggggcgtgttcggcccagc
aactcacccgccacgccagacggccacagccccaacccctttcagcatggcccctccccc
ttcaactcccagacctctgacctttatggcacaaggaacaacttccaaccaaagcaacct
tctccagagcctgatttgaacaacgaggtgtttgatgacaccgatggtcgggagggagct
ggcgagggtctgaccggcaaggtctcccctcggcaacccctcttatcagaccgtcgtgag
tatatgagctttgcagcagtgccgcgccgctccacgccttccatggacctgcagagccca
tcatttggtggtaagcacagcccagagcagcgctctttcagggacagacagaagtacttt
gagatcgacgtgaagcagcagacgccagaaaaacccaagcctcgagtctccctcgtcggg
gaggatgacctcaagaaaatgagggaggaagaagagaggaagtttgagcagcgagcgcgg
gagtacttaatggatgatgacgacgaggatgaggatgaggaggacctggctaagcaggtg
gcacagatgaaggccaccggaaaggtgttgctggatggagtggagtacaaagtggagccg
gtgtccaccccatcgcagcactgctccacaccaccaaactacagctcagggccttcctca
gtagatggcaagggagactctcagaggaattcattggaggacagcttcaggctggagcag
aggcccaactcaatgactggtctcatcccagcttaccccggggagtcagcagctcccatc
cgaacagccaaagcagagcgcagacaccaagagagacttcgtatgcagagccccgagctg
gccgtggcacctgacaaggacctgtcccctgcagagaaacgagccctggaagccgagaag
agagcaatgtggagggcagcacgaatgaagtctctggagcaggatgcactgaaggctcag
atggtcatcgccaagtctcgggacgggaagaaacgtgggacactagatcaactgacagag
tcaccctcgcctgcaccaacgccctctcccactcctatggaggagctcagtcctcgagga
ttaacctcgccaggcaggctgtccgtgtcaacaaagaagtttgactaccgacagtttgct
gccattccttcttccaaacccgtatacgacatccagtccccggacacaactgacacagag
ttaaagttcatggatgacggctccagtaacccaggaaccgccgcgagccccgacgtcacc
ccgctgcctgccacctccgccctggaggagatggctctgtacagcaacaagcgcaaactg
aggcagggccgccgcagcctggaaaccgctgtgcccacataa
DBGET
integrated database retrieval system