Oreochromis aureus (blue tilapia): 116329662
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Entry
116329662 CDS
T07295
Symbol
col14a1a
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oau00535
]
116329662 (col14a1a)
Proteoglycans [BR:
oau00535
]
Extracellular matrix (ECM) proteoglycans
Others
116329662 (col14a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_3
Mid1
Motif
Other DBs
NCBI-GeneID:
116329662
NCBI-ProteinID:
XP_039475552
LinkDB
All DBs
Position
LG11:7389804..7540812
Genome browser
AA seq
1873 aa
AA seq
DB search
MLSMGQISWCLWAPLVLVALVSYYPSKAQGQVPAPRKLRFKVLSSSKLLVSWKEPKGDFD
SYLFFYKSTPGGQQREIIVSKSDTSVLITDYSPSKVYTFSVIAVSGNKQSRPLQGRFKGE
RNESDKTESQRFTDSAAPPRNANEISGVDQFVCHTEAIADIVILVDGSWSIGRLNFRLVR
MFLENLVNAFDVGIDKTRIGLAQYSGDPRIEWHLNAFSTKDAVVDAVRNLPYKGGNTLTG
LALTFILENCFKPESGARPGIPKIGILITDGKSQDDVIPPAEELRNAGVELFAIGVKNAD
ENELRSIASEPESNHVYNVADFNIMSSIVGGLTKTVCKQVEQQDKDIKQKHIPETTGMPL
DLVTSDVTAQSFRVSWSHAPGNVEKYRVVYYPTQGGDLGDPQEAVVVGSESSVVLQHLSS
LTEYQLAVFAVYANKASEALRGSETTLALPTVTGLQLFDVSHNTMKIRWNSVDGVSGYML
LYAPLTDDLDEKEIRVSDAVTELELDGLIPHTEYTVTVYAMFGEEASEPVTNQETTLPLS
PPSNLQFSDITHNSAHISWDPAPSGVNGYRIMWDKTDGLVTDEVEGGSVSSYDLGELTSL
TEYSVAIFALYKEGESEPLTDAFTTTPVPGPLNLRSSEVSTDSFKVSWDHSASDIILYRL
SWTPFDGGDTKKVVLSGSDNGYTLTGLSPSTEYEVMLTAIFKDNSESDTVFVTQTTLPTQ
TTTTSTKTTAARQAVRNLQLSDETTQSLEASWELEDPNVESYRVAYTSLSGDHKDSMSVS
GGQTRAVLEPLQSDTSYKVTVTPVYSDGQDGLGASAMSSTLPLLPPENLRVSEEWFNRLR
VSWDPPLSPVEGYKIVYQPLYVHGPVLETTVDEDENSMLIVNLQSGTEYSVRVKASYPAG
ESEPQLINAKTLFLGVSGLSAYQVRPNSMCVQWQPLLHATIYRISIQSTLNDQRQEVRLG
GGVSRHCFYDLTPSSQYQISVHAQIQETEGPSVSITDMTLPAPTQAPTEPPTTEPPPTIP
PAKEVCKEAKADLAFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGQDGTQVAVAQFSDD
ARTEFQLSSHSNKEALLEAIQRISYKGGNTKTGRAIKHVKESIFTSEAGARRGVPKVLVV
LTDGRSQDDVNKVSKEMQVEGYIIFAIGFADADYGELVNIASKPSDRHVFFVDDLDAVKK
IEEQLITFVCEAATATCPSVLMSGNTLAGFRMMEKFGLVEKEYSTIPGVSLEPGSFNSFP
CYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPETPQEPFALWEILNKDNDPLVGLI
LDNSGKTLTFFNHDYKGEFQTATFEEAAIKKIFHGSFHKLHVTISKMSVKVVLDCSVVGE
KYINAAGNITTDGMEVLGRTVRSRGRQDSSAPFQLQMFDIICSTSWASRDKCCELPALRV
EEQCPPMPHACTCSQDSKGPPGPSGPPGGPGIRGARGDRGEPGVTGPQGPVGEVGPSGPP
GQPGPQGPNGLSIQGPPGAPGEKGERGEAGPSGPMGVPGSPGSPGRDGPPGSRGLPGNTG
PQGQRGPPGPVGAPGAPGAPGPGGPTGSQGDQGVPGPAGTKGDKGERGDVQSQASVRAIA
RQVCEQLIQSHLSRYNSFLNQIPMQPAVSVRTVPGPPGEPGRRGPPGPQGEQGPPGRPGF
PGTNGQNGQPGERGLPGEKGERGTPGVGPQGPRGPSGPPGLPGEGRTGSQGPPGRPGNPG
TPGRPGNPGTTGPAGQPGYCDANSCLGYNVGVQALPHGAYQPYSPPYNQPHHPAAEAYDN
QGGGEEEEEEQDPYYRGYPPQYYPQQPSQLAHINYGYHLSPTYSEDVELRSPGVARRFSR
DVDVMEESEDGGL
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaatggggcagatcagttggtgtttgtgggctccactggtgttagtggccctt
gtttcctattaccccagtaaggcacagggacaagttccagctccgaggaagctgcgtttc
aaagtgctgagctcaagcaaactccttgtttcatggaaggagcccaaaggagactttgac
agctatctgtttttctacaaaagtaccccaggtggtcagcagagggagatcatagtgtct
aaatcagacaccagtgtgttgataacagactacagtccttctaaagtctacactttcagt
gttatcgcagtcagcggcaacaagcagagcagaccacttcagggcagatttaaaggtgaa
agaaatgagagtgacaagactgagtcccagaggttcaccgattcagctgctcctccgagg
aacgccaacgagatctctggagttgaccagtttgtgtgtcacactgaggctattgcggat
attgtgatcctggtggacggctcctggagtattggccgactaaacttcaggctggtccgc
atgttcttggaaaacctggtcaatgcctttgatgttggcattgataaaacaaggataggt
ctcgcacagtacagtggcgatcccaggattgagtggcatttaaatgctttctcaactaaa
gatgcagtcgttgatgctgtcaggaatctgccctacaaaggaggaaacaccctcacaggt
cttgcattgacttttatcttggagaactgtttcaagcctgaatctggtgcaaggcctgga
atacccaagattgggatcctgatcaccgatggaaagtcccaagatgatgttataccacca
gcagaggaactgagaaatgctggtgttgaactgtttgctatcggtgtaaagaatgccgac
gagaatgagctgcgctccatcgcctcagaaccagagagtaatcatgtctacaatgtggct
gactttaacatcatgagctctattgtaggggggctaacaaaaacagtgtgcaaacaggtg
gagcagcaggacaaagacatcaagcagaaacatataccagagacaacgggaatgccgctt
gacctagtgacatcagacgtcacggcccaaagctttcgggtttcatggagccatgccccc
ggaaatgtagagaaatacagagtcgtttattatcccactcagggaggagacctaggagac
ccacaggaggctgtagtggtcgggagtgagtcttcagtggtgttacagcatcttagctcc
ctcactgagtaccaactggctgtgtttgctgtgtatgcaaacaaggcgagcgaagctctg
agaggatcagaaacaacactggctcttcccacagtcaccggcctccagctgtttgatgtg
agtcacaacaccatgaaaataagatggaacagtgtggatggagtctctggctacatgctg
ctttatgcacctctgacagatgacttggatgagaaagagataagggtgtcggatgcagtg
acggagctggagctggatgggttgatccctcacaccgaatataccgtcactgtttatgcc
atgtttggcgaggaggccagtgaacctgttacaaaccaggaaaccacattaccactgagt
cctcccagcaacctccagttttctgacattacccacaactcggcccacatcagctgggac
cccgcgcctagcggagttaatggttaccgcatcatgtgggacaagacagacggactagtc
acagacgaggtggagggtggttcagtgagttcttatgacctcggtgagctgacatctctg
acggaatactcagtggcaatttttgccctgtacaaggagggcgaatcagaaccgctcacc
gatgcgttcaccaccactccagttcctggtcctctgaatctacgctccagtgaggtcagc
acagacagctttaaggtcagctgggatcactcagccagtgacattatcctctacagactc
tcctggacaccattcgatggtggtgacacaaaaaaggtggtcttgagtggaagtgataac
ggatacacactgaccggcctcagtccctccactgagtatgaagttatgctgacagccata
ttcaaagacaattctgagagcgacacagtctttgtcactcaaaccacattgcccacacag
acaacaacaacttctaccaaaaccacagcagcacgtcaggctgtgagaaaccttcagctg
agtgacgagaccacccagagcttagaggcttcgtgggagctggaagaccccaacgtggag
agctacagggtcgcctacacaagcctcagcggagatcacaaggactctatgtcagtttct
ggaggtcagacgagagcagtgctcgagcctttacaatcagacaccagctacaaagtgaca
gtcacaccggtgtacagcgatggacaagatggcctcggtgcatctgccatgagttccaca
ttgccgctcttgcctcctgaaaatctgcgtgtgtcagaggagtggttcaaccgcctcagg
gtctcgtgggatccacctctgtctcctgttgagggttacaagatcgtctaccagcccctc
tatgttcacggtccagtattggagacaacagtggatgaagatgagaactccatgcttatt
gtcaatctacaaagtgggacagagtacagtgtccgagtaaaggcttcctatcctgcagga
gaaagtgagccacagctaataaatgccaagacattattccttggtgtgtctggcttgtca
gcctaccaggtgcgacccaacagcatgtgtgttcagtggcagcctcttctacatgctaca
atatacagaatctctatacagtccacactcaatgaccagagacaggaagtgaggctggga
ggtggagtttcccgacactgcttttacgacctcactcctagtagccaataccagatcagc
gttcacgcgcaaatacaagaaacggagggaccctctgtctccatcactgacatgacactt
ccagcacccactcaggcgccgactgaaccgcccactacggagcccccacccacaatccca
ccagccaaagaggtatgtaaggaggccaaggctgacctggcgttcctggtcgacggctcc
tggtccatcggagatgacaacttcatgaagattacacgtttcctctacagcaccatggga
tcgctggatctgattggacaagatggcacccaggtggccgttgctcagttcagcgacgat
gctcggaccgaattccagctgagttctcatagcaacaaagaagcactgctggaggctatt
cagagaatcagctataaaggaggaaacaccaagacaggtagagccatcaaacatgtgaag
gagtctattttcacctcagaagcgggagccagaaggggcgttcccaaagtcctggtcgtt
ctgaccgatggacgttcacaagacgatgtcaacaaagtgtccaaggagatgcaggtggag
ggctacatcatcttcgcaattggctttgcggacgcagactacggtgagctggtgaatatc
gccagcaaacccagtgacagacacgtcttttttgtggacgatttggacgctgtgaagaaa
atagaagagcagctcattacctttgtctgtgaggctgccactgccacttgtccgtctgtt
ttgatgagcggtaacacgttggcaggtttccgtatgatggagaagtttggcctggtagag
aaggagtatagcaccatacctggagtttctctggagccgggttcattcaacagcttccct
tgctacaggttacaccgtgatgccctggtgtctcagcccaccaagtatcttcaccctgag
ggtttaccatctgactatactatttctatgatgctccgcctacttcccgagaccccacag
gaaccttttgcgttgtgggaaatcctcaacaaggacaacgacccattagttggactgatt
cttgacaactctggaaagacactgacgttctttaaccatgactacaaaggagagttccag
actgctacctttgaagaggcagcaatcaaaaaaattttccatggcagcttccacaagctc
catgtgaccatcagcaagatgtctgtgaaggtggtactggattgctcagtggttggggag
aaatacattaatgcagctggtaacatcaccaccgatggaatggaggtcctcggaaggacg
gttcgatccagaggtagacaagacagctctgctccgttccagctccagatgtttgacatt
atctgcagtacttcctgggccagcagagataagtgttgtgagctgccagcactgagagtt
gaagagcagtgccctcccatgcctcatgcctgtacctgctctcaggacagtaaaggacct
ccaggaccatctggaccacctggtggtccaggcatacgaggagccagaggagacagaggc
gagccaggagtgacgggacctcaagggcccgtaggagaggttggcccttctggaccccca
gggcaacctggtcctcaaggacccaacggactctccattcaggggcctccgggagctcct
ggggagaaaggagagagaggagaggccggcccttccggaccaatgggagttcccggaagt
cctggctcacctggtagagatggtcccccaggatcaaggggtctgccaggtaatactgga
ccacagggacaacgaggaccaccaggaccagttggagcaccaggagcaccaggggctcca
ggaccaggtgggccaacagggtcacaaggggatcaaggagttcctggtcctgctggtacc
aaaggcgataaaggagaaagaggtgatgtgcagtcccaggcgtctgtgcgagctattgca
cgtcaagtgtgtgaacagctcatccagagccacttgtcgcgttacaactccttcctgaac
cagatccccatgcagccagcggtgtcagtccgaacagtgcctggaccaccaggagagccg
ggtaggagaggccccccgggtcctcagggagagcaaggtccacccgggaggccaggcttt
cccggtactaacggccagaacgggcaaccaggcgagaggggtctgccaggagaaaaggga
gaaagggggactccaggggttgggcctcaggggcctcgaggaccatccggacctcctggt
ttgccaggtgaaggacggacaggtagccagggcccacctggtcgacctggtaacccaggg
acaccggggaggcccgggaatccaggtaccacaggaccagctggccagcctggatactgt
gatgcaaactcctgtttgggatacaatgtgggagttcaagctttgcctcatggcgcctac
cagccctacagtcctccctacaatcagccacaccaccctgctgcagaggcttacgacaac
cagggagggggtgaggaggaggaggaggagcaggacccctattatcgtggttatccccct
cagtactaccctcaacagccttctcagctggctcacatcaactacggttaccacttaagc
cccacctactccgaagacgtggagctgaggtcaccgggcgtcgccaggaggttttcgcgg
gatgtcgacgtaatggaggagagcgaggacggaggactttag
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