Oreochromis aureus (blue tilapia): 116329693
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Entry
116329693 CDS
T07295
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116329693
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oau01009
]
116329693
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oau04515
]
116329693
Protein phosphatases and associated proteins [BR:
oau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116329693
Cell adhesion molecules [BR:
oau04515
]
Cadherins
Protocadherins
116329693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TM_ErbB1
Cadherin_pro
Motif
Other DBs
NCBI-GeneID:
116329693
NCBI-ProteinID:
XP_031607621
UniProt:
A0A668VEA6
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All DBs
Position
LG2:complement(28776761..28798741)
Genome browser
AA seq
1021 aa
AA seq
DB search
MAAPRCEALFFLAAVLLVSCSAAPTDILYRVLEERPPNTLIGSLATDQGLPNAGHLYKLE
VGAPYLRVDGSTGDIYTTEIPIDRETLRDCRNLFEGDKCYLEFEVSITDMVKGIGTGPRL
IEGRIEVLDINDNTPQFSSPILTLSIPENTHIGALFSIPMATDRDSGSNGVADYSLSSST
GSDADQLFSLQVAVDAEEKLPQLVVMGNLDREIKDSYDLNIRVQDGGNPSRGSSALLRVT
VTDQNDCTPKFEKSHYEADLPENSPPGHSVLQVKANDADTGLNGEIDYSLHQASESVQRL
LRIDRATGIVYVKGLVDREEENFLKFFVVARDRGPNSKSSKVLVTVHVKDQNDNAPAIEI
RGIGLVTHHDGVANISEDMPIGTPVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESA
NDRKRKYFLQTTTLLDYERIKDYRIEIVAVDSGNPALSSTNALKVQVTDINDNAPNFSPS
TVEVDFAEGNQPGDKVLDIVATDADSGTNAELFYSITEPTARRLFKINSSTGEVRVNHSL
DREEKERYEFRVIAADKGVPSKTGTATVVVNVLDCNDNDPKFTLNGYSFSVIENMPPLNP
VGVVTVNDADKDENSQVRLFVEQDNGMFLIQNGTGTILSSISFDREKKSTYTFQLKAVDG
GNPPRSSYVGVTINVLDENDNAPYVTRPSNSSFVHLPVGTRPNTHVEVVKAEDIDAGLNA
ELEYTIIGGNPYDLFQISTNDGEITAAQELTPKYNGLHRLVVKVVDKGKPPRNTIALVHV
FVNETKSNVSLIEALVGHSLYTPLDRDIAGDPNYAYSQQSNILYGSLAGFAVVILVIVAV
VLIRRWVQKDTKSGYQAGKKESKDLYAPKQGPKNGKGKKSKKGKAPKPAKTGEDDEDASL
QKGLKFNLINENVNDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQA
VQDLPATNTFVGTGDNNSTGSDQYSDYSYKANPPKYSNKQVGDYANTAVYPRDIHWTNRV
W
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgaggtgtgaagctttgttctttttagctgccgtcctgctggtgtcttgc
agcgccgcgcccactgacatcctctatcgggttcttgaggagcgaccgcccaacacgctg
attggcagcctggcgacagaccagggcctgcccaatgccggtcatctctacaagctggag
gtgggtgcgccgtacctgagggtcgacggctcgaccggtgacatctacaccaccgagatc
cccattgaccgtgagacgctgagagactgccgcaacctgttcgagggcgacaaatgctac
ctggagttcgaggtgtcgatcactgacatggtgaagggtatcggcacggggccgcggctc
attgaaggtcgcatcgaggtcctggacataaatgacaacacgccgcagttctcctcgcct
atcctgactctgtccattcccgagaacacgcacatcggcgccctcttctccatccccatg
gccactgacagagactcggggagcaacggcgtggcagattactctcttagcagtagcacc
ggatcagacgctgaccagctcttcagcctgcaggtcgccgtggacgcagaggagaagctg
ccacagctggtcgtgatgggcaacttagatcgtgagataaaggactcgtatgacctgaac
atcagggtacaggatggcgggaatccttcgaggggcagcagcgctctgctgagagttacg
gtgaccgaccagaatgactgcactccgaagtttgagaaaagtcactacgaagctgaccta
ccagaaaacagtccaccgggacactctgtactgcaggtcaaagccaacgacgcagacact
ggactcaatggagagatagactacagcctccatcaagcatcagaatctgtccaaaggctt
ctgcgcattgaccgcgcaacaggcatcgtctacgtcaaaggtcttgtggacagagaagaa
gaaaactttctcaagttctttgtggtggcaagagatcgtggaccgaattccaagagttcc
aaggtccttgtgaccgtacacgtcaaggaccaaaatgacaatgcaccagccattgagatc
cgtggtattggcttggtaacacatcacgatggtgtggccaacatttctgaggatatgccc
attggtacaccagtggcactggtccaggtgtcagaccgtgatgagggggaaaatgctgtg
gtgacatgtgttgttgctggtgatgttccatttcagcttcgtcccgcaagtgagtcagcc
aacgatcggaagagaaaatacttcctgcagacaacaaccctgctggattatgagcgtatt
aaggattacaggattgaaatagtcgctgtggattctggaaacccagctctgtccagcact
aacgctctcaaagtccaggttacagacattaatgataatgcaccaaacttttccccttca
actgttgaggtggactttgcagaaggcaaccagccaggagacaaagttctagacattgtg
gcgacagatgcagacagcggcacaaacgcagagttgttctatagcatcactgagccaacc
gccagaaggctctttaaaattaattccagcactggagaagttcgtgtgaatcactcattg
gatcgggaagaaaaagagcgttatgaattccgtgtaattgcagcagacaagggtgtgcct
agtaaaaccggcactgccacggtggtggtgaatgttctagattgcaatgacaatgacccg
aagtttacactgaatggctatagcttctctgtcatagagaacatgcctccactcaatcct
gttggtgtagtgacagtcaatgatgcagataaggatgagaattcccaagtcaggctgttt
gtggaacaggacaatggcatgtttctcatccagaatggcacaggaaccatcctgtcaagc
atctccttcgaccgtgaaaagaagagcacctacacgtttcaactaaaggctgtggatggt
ggtaacccacctcgatcctcctatgtgggtgtgaccatcaatgtcttggatgaaaatgat
aatgccccatatgttaccaggccgtctaactcgtcctttgtacacctaccggttgggacc
cgaccaaacacacatgtggaggtggtaaaagctgaggacattgatgctggactcaatgct
gagctagagtataccatcataggtggaaatccatatgatctgttccaaatatctaccaat
gatggggaaatcacagcagcgcaagaattaacccccaagtataatgggctacatcggctg
gtagtgaaggttgttgataagggcaaacctcctcgtaacaccattgcactagttcatgtt
tttgtaaatgaaacgaaatcaaatgtctccctcattgaagcgctggttggacacagcctc
tacacccctttggacagggacattgccggagatcccaactatgcctattctcagcaaagc
aatattctgtatggcagtcttgccggttttgctgttgtcattttagttatagttgccgtg
gtcctcatcagacgctgggtacagaaggataccaagagtggttaccaggccggcaagaag
gagagtaaggacctgtatgccccaaagcagggccctaaaaatggcaaagggaaaaagagc
aaaaaggggaaggctccaaaaccagctaagacaggagaagacgatgaggacgccagtcta
caaaaaggcctcaaattcaacttaatcaatgagaatgtcaatgacagtcccagaatccac
ctgccccttaactatccaccagggagccctgatctggggcgccactatcgctccaactcc
ccgttaccatccatccagctgcagccacagtcaccgtctgcctccaagaagcaccaggct
gttcaggacctccctgccaccaataccttcgtggggacgggcgacaacaactctactggc
tccgaccaatattcggattacagctacaaggccaacccacccaaatacagcaacaaacag
gtaggagactacgcaaacacagcagtgtaccccagggatatccattggaccaaccgggtg
tggtag
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