Oreochromis aureus (blue tilapia): 116329715
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Entry
116329715 CDS
T07295
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oau03016
]
116329715 (cdkal1)
Enzymes [BR:
oau01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
116329715 (cdkal1)
Transfer RNA biogenesis [BR:
oau03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
116329715 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
116329715
NCBI-ProteinID:
XP_031607648
Ensembl:
ENSOABG00000013579
LinkDB
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Position
LG11:8207215..8452181
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AA seq
564 aa
AA seq
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MPSSCDSLMEDIEDMVSSSDPTPHERQSARKSIIPRSRKKKELLSDEELQADSLIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPTEADVWLLNSCTVKNPAEDHFRNSIKK
AQDQEKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFKRVVDFLKERVPGVTIATDIICG
FPGETEEDFQETIDLVKAYRFPSLFINQFYPRPGTPAARMEQVPAHVKKQRTKELSQVFH
SYNPYDHKVGERQHVLVTEESFDSQYYVAHNKYYEQVLVPKRVEFKGKMIVVDIYEAGKH
FMKGKPVEDSKPFTPSIAMPLQKGEVSGLLQEQKVNGVHVSAPTPSSCTVSIGSNSLDRE
MLKKIGIGLALAAVILAYIAQKVY
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcttcttgtgactctctgatggaagacatcgaggacatggtgtcttctagtgac
cccactcctcatgaaagacagtctgctagaaaaagtatcataccaaggtcaaggaagaag
aaagagctcctgagcgatgaggagcttcaagctgacagtttgatccctggtacccaaaag
atctggatgaaaacatggggctgcagtcataacaactcagatggggagtacatggctggg
cagctggctgccagcggatacaagatgactgatgacccgacagaagcagacgtgtggttg
ctcaacagctgcactgtgaaaaaccctgcagaggatcacttcagaaactcaatcaaaaaa
gcccaggaccaggagaaaaaggtggtagtagcaggatgcgttccccaggcccagccaagg
atggattacctcaaaggtctcagcatcattggggtccagcagattgatcgagtggtggaa
gtagtggacgaggctgttaaaggccactcagttcgtctgttgggtcagaagaaagatgga
ggccgacgacttggaggagctcgactggacctccccaagatcaggaagaaccctctcatt
gaaatcatctcaattaacactgggtgtctgaatgcgtgtacctactgcaagacgaagcat
gcaagaggagacttggccagttatcccatagaggagctagtggagagagctaggcagtct
tttcaggagggagtgtgtgagatctggttgaccagtgaggacaccggtgcttacggtaga
gacatagggacagacctgcccacgctgctgtggagactggtggaggagattcccgaaggt
gccatgctaaggctggggatgacaaatccaccatatatcctggaacacctagaggagatg
gccaagattttgaatcatccacgcgtctatgccttcctccacgttcccgtgcagtcagcc
tctgatagcgtactgatggatatgaagagagaatattgcattgacgacttcaaacgagtg
gtagacttccttaaagaaagagtccctggtgtaactattgctacagatataatctgtggt
tttcccggagagaccgaggaagactttcaagaaaccatagacttagtgaaagcctatcga
tttcccagtcttttcatcaaccagttttacccccgacccggtacacctgccgccaggatg
gagcaagtaccagcacatgtgaagaagcaaagaactaaagagctgtcgcaggtcttccac
tcttacaacccttatgaccataaggtaggggagagacagcatgtgttggtgacagaggag
tcatttgattcccaatactatgtggctcacaacaagtactacgaacaggtgctggtacct
aaaagggtggagtttaaaggaaagatgattgtggtggacatctatgaggcaggaaaacac
ttcatgaaaggcaaaccagttgaagacagtaagccgttcactccttccattgccatgccg
cttcagaaaggagaggtgtctggtctgctgcaggaacaaaaggtcaatggcgtccatgtt
tctgctcccacgccttcttcgtgcaccgtctccattggatctaatagtctggacagagaa
atgctgaagaagattgggatcgggctcgcgctggcagcagtcatcttggcttacattgca
cagaaagtgtactga
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