Oreochromis aureus (blue tilapia): 116329787
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Entry
116329787 CDS
T07295
Symbol
supt5h
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116329787 (supt5h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116329787 (supt5h)
03019 Messenger RNA biogenesis [BR:
oau03019
]
116329787 (supt5h)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116329787 (supt5h)
RNA polymerase I system
116329787 (supt5h)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
116329787 (supt5h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
DUF150_C
Ribonuc_P_40
DUF6406
Motif
Other DBs
NCBI-GeneID:
116329787
NCBI-ProteinID:
XP_039478243
Ensembl:
ENSOABG00000007770
LinkDB
All DBs
Position
LG14:complement(1998886..2017919)
Genome browser
AA seq
1082 aa
AA seq
DB search
MSDSEDSDFSDNQSERSSDGEAEEVEENEEETGSPVGSDKVADEEGEDLEDEEEYDEEEE
EDDDDDRPRKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEAEVSNIDHVVLDED
HSGSRRLQNLWRDSREEALGEYYMRKYAKSSGGEHYSGGSEELSDDITQQQLLPGVKDPN
LWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPDHVKGYIYVESYKQTHVKAA
IEGIGNLRMGFWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEP
SQNTISLKMIPRIDLDRIKAKMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGEVSHDGDF
MIFEGNRYSRKGFLFKSFAMSAVITDGVKPTLSELEKFEDQPEGIDLEVVTESGKEREHN
LQAGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHEVRKYFRMGDHVK
VIAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGEL
VQLDPQTVGVIVRLERETFQVLNMHGKVLTVRHQAVNRRKDNRFAVALDSEQNSIHVKDI
VKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTV
GGFAPMSPRISSPMHHGGGGAQQRGGGGGGMGRGRGRRDNELIGQTVRISQGPYKGYIGV
VKDATESTARVELHSTCQTISVDRQRLTAINHRPRPSGLTSAHVRTPIYGSQTPMYGVGS
RTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSRNEEDYDFGYDD
EPSPSPQAYGTTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAAPSPQGSY
QPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGG
YNPHTPGSNIEQGGSDWVTTDILVRVKDSFMDLMGQTGVIRSVTGGMCSVFMQETEKVVS
VSSDHLEPVTPTKNNKVKVILGEDREATGILLSIDGDDGIVRMELDDQLKILNLRFLGRL
EH
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacagcgaggacagcgacttctccgacaaccagagcgagcgcagcagcgatggc
gaggccgaggaagtggaggagaatgaggaggagacgggcagcccagtgggcagtgacaag
gtagcggatgaggagggggaggacctggaggatgaggaggagtacgacgaagaagaggag
gaggatgacgacgacgatcgtccgaggaagaagccgagacacggagggttcatcctggat
gaagctgatgtggacgatgagtacgaggatgaggatcagtgggaggacggagcggaggat
attttggagaaagaggaggctgaagtgtcaaacatcgaccacgtggttctggatgaggat
cactctggatccaggcggctgcagaacctctggagagactccagggaggaggcgctgggc
gaatactacatgaggaagtacgccaagtcgtctggaggggagcattactctggagggtcc
gaggagctttctgatgacatcacccagcagcagcttcttcctggagtcaaggaccccaac
ctgtggacggtcaagtgcaagatcggagaggagagggcgaccgccatcgcactgatgagg
aagttcatcgcctaccagttcactgacacgcctctgcagatcaagtccgtggtggccccg
gatcatgtgaagggttacatctacgtggagtcgtacaagcagacgcacgtcaaggctgcc
atcgagggcatcggcaacctgaggatgggcttctggaaccagcagatggtccccatcaag
gaaatgacggacgtgctgaaggtcgtcaaggaggtcaccaacctgaagcccaagtcgtgg
gtcaggctgaagcggggcctgtacaaggacgacatcgctcaggtggactacgtggagccg
agccagaacacaatctccctgaagatgatccctcggatagacctggaccgcatcaaggcc
aagatgagcctgaaagactggtttgccaagaggaagaagttcaagaggcctccacagagg
ctgtttgatgctgagaagatcaggtctctgggaggagaggtcagccatgacggagacttc
atgatctttgaggggaaccgttacagccgcaaaggattcctcttcaagagctttgccatg
tctgctgtgatcacagacggagtgaagcccacgctgtcagagctcgagaagtttgaagac
cagcctgaaggaatcgacctggaggtggtcacagagtcgggtaaggagcgtgaacacaac
ctgcaggccggcgacaatgtggaggtgtgtgagggcgagctgatcaacctgcagggaaaa
atcctcagtgtggacggcaacaagatcaccatcatgcccaagcacgaggacctgaaggac
cctctggagtttccggctcacgaggtgagaaaatatttccggatgggcgaccacgtgaag
gtgatcgccgggcgatacgagggcgacactggcctcatcgtcagagtggaggagaacttt
gtcatcctgttctccgacctcaccatgcacgagttgaaagtgctgcccagagacctgcag
ctctgctctgagaccgcgtccggcgttgacgtaggggggcagcacgaatggggcgagctg
gtgcagctggacccgcagacggtcggcgttattgttcggctggagagggagacgttccag
gtgctgaacatgcacgggaaggtgctgactgtgcgccaccaggcggtgaaccgcaggaag
gacaaccgcttcgccgtggcgctggactcagagcagaacagcattcacgtgaaggacatc
gtcaaagtcattgacgggccgcactctggccgtgaaggcgagatccgtcacctgttccga
ggcttcgctttcctccactgtaagaagctggttgagaacggaggaatgttcgtctgcaag
accagacacctggtgctggcgggcggatctaagcccagagacgtgaccaacttcacagtg
ggaggattcgcaccgatgagccctcgcatcagcagccccatgcaccacggtggaggaggt
gctcagcagagaggaggaggcggaggaggaatggggcggggccgaggacgaagagacaac
gagctgattggtcagacggtccgtatctcccagggtccttacaaaggatacattggtgtg
gtgaaggatgcaaccgagtccacggccagggtggagctgcactccacctgtcagaccatc
tctgtggaccgacagcgattaacagcgattaaccaccgtcctaggcccagtgggttaacc
tccgcccatgtacgtactccaatttacggctcccagactcccatgtatggcgtcggctcc
aggacaccaatgtatggatctcagactccgctgcacgacggaagccgtacgccccactat
ggatctcaaaccccattgcatgatggaagcagaactccaggtcagagcggagcttgggat
cccagcaaccccaacacaccgtccagaaatgaggaagactacgacttcggctacgacgac
gaaccctctccgtcccctcaggcctacgggacgacccccaaccctcagaccccgggttac
cccgaggtcccctcaccacaggtcaaccctcagtacaacccgcagacacctggcacgccc
gctatgtataacacagagcagtattctccatatgcggccccgtcccctcagggctcctac
cagcccagccccagccctcagagttaccaccaggtggcgccctcacctgtcggctaccag
aatacgcactcaccagccagctaccaccccacaccatcccccatggcttaccaggcgagt
cccagtccgagtcccgtgggctacagtcccatgacgcctggagcgccctctcctggaggc
tacaaccctcacaccccgggctccaacatcgagcagggcggcagcgactgggtgaccacc
gacatcctggtccgagtgaaggactcgttcatggacctgatggggcagaccggggtcatc
cggagtgtgacgggagggatgtgctcggtgtttatgcaggagactgagaaggtggtgagc
gtcagcagcgatcacctggagccggtcacgcccaccaaaaacaacaaggtgaaggtgatt
ctcggagaggaccgcgaggccacggggatccttctgagcatcgacggagacgatggcatc
gtgcgcatggagctggacgaccagctcaaaatcctgaacctgcggttcctgggccgcctc
gagcactga
DBGET
integrated database retrieval system
