Oreochromis aureus (blue tilapia): 116329791
Help
Entry
116329791 CDS
T07295
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oau04990
]
116329791
Domain-containing proteins not elsewhere classified [BR:
oau04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
116329791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
FXa_inhibition
hEGF
EGF_3
Plasmod_Pvs28
EGF_Teneurin
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
116329791
NCBI-ProteinID:
XP_031607739
LinkDB
All DBs
Position
LG14:complement(2217656..2249760)
Genome browser
AA seq
1676 aa
AA seq
DB search
MRRICCFLSLSCSFIFFFTSLLPADGQTAGGGARGGGGVETIQVMFTPTICKVRCSQDRC
VNYCERGNVTTLYSGGEGGGRRDGSHGPGFRVFLCPLLCKNGGVCLQKDRCLCPPNFTGK
FCQVPVTPTDSSAAFTNEIVKPVLLSSMASNQELVRSEFLLPLGRDAETMTAGAPSGPLV
KVRVQHPPEANVKVHQVKVSGFTPTLRTLSSSSSSGSAGAPAPAGSRVLAQTVRGDSVYT
QQSGFKYCFREVKDGQCSSPLPGLRSKEMCCRGIGKAWGIDDCVICPENTGQSDASCPVG
FERANGTQCVDVNECLQPGLCENGICVNTRGSYSCVCRLGFILDASHGICISQSVISEEK
GQCYRVLGSGLGPSSCSLPILKSITKQICCCSRVGKAWGPDCQRCPYFGSVAFKEICPAG
PGYQYSPSTLKFNQRVSELEGGGGAVLVNGSNKDNQGPVSGSRSPLKPPPSGGVSTSSAT
GAGTRPSPPQPQPQPHPGAGFPASSSSSSSSSRPVQPGSAGTSATQGRTRPSQSRPDSTQ
LRPQPPSAGSQAADRFSSVHRADPPPSRGDSLPAPGQPQSPERGSRPSEDLPLEARPPVS
PTPPRVQTVRGVCESRPGVCGRGRCVDQPGGKHTCVCDLGFQLSSQRTHCQDVNECLQSP
AVCSVGECVNSIGSYRCACPSGYRSNSQQTSCQDIDECQQNPCVNGRCDNTAGSYRCICR
LGYRLVGNTCTDVDECADPLQCPGQECVNTPGSFRCVSCPPGHGLLNNVCRDVNECRQNP
CSNGRCENTPGSYRCVCHHGYKLQNNTCTDVDECAEPSQCPGQMCVNSVGSYRCVSCRAG
FRLTDRQCTDINECEDGDSCPGQRCVNTEGSYRCVDCRQGYHSVDGVCTDIDECASGRAC
EAERVCVNTVGSFRCDCAPGYRTSGLGRQCRDINECLEGDFCFSRGECVNTPGSYTCVCS
QGFTLSENRTACLDVDECVKAGVCSDGRCVNTEGSFQCECQIGFTTNPEGTACLDVDECV
LSGGSICGSQRCENTIGSYSCLTNCEPGYKVNHAGICEDINECANTTVCGANAYCQNLFG
TYRCVCDQGFTSSADGKTCVDVDECVSLPGVCGSARCENVEGSFMCECDQAGQSYDTAAR
QCVHAAALETDSVRARQSSTTTTSSSSFLASVVELSPMLLPLPQAHPGELRECYYNLAER
GTCSLLATNTTQQECCCTLGQGWGLGCQYHPCPTAYTAEFLTLCPSGNGYVTEGPGAFSY
RDVDECKRFHPEVCKNGVCVNNIPGYSCYCSSGYVYNSTLLECVDHDECEEESCVGGICV
NTVGSYYCSCQPPLVLDDTQRNCVNSSDLNEDENLSLCWQHVTAGLMCQSALLGAQVTFT
DCCCLYGQGWGMSCALCPATDTAEYASMCSSFPPTPLFPATYPDSETEAGRRRGSASPNL
PPYGLDYFPEIPSRDYGHSDYDDYSPAEGSRSGFRGSLPDETYRRPEYSTGYYSEGDYGP
PDSSQSRPPPFRIPPDPRADIGFGVQPDSPPLSLAPLPGGRYEETEEEAEDRAWRPGPPF
PPFTDRSGGGGVPRRLYERRYESYASLSTAEDCGILHGCENGRCIRVAEGYTCDCYQGYE
LDMTTMTCIDVNECEDSVRLEFPCVNARCVNTDGSYRCVCRRGYVMSRRTNHCVAA
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaatctgctgtttcctgtcactgtcctgctccttcatcttcttcttcacctct
cttctgccagccgatggacagacagcaggaggaggagcaagaggagggggaggagtagag
acgatccaggtgatgttcacgccgaccatctgcaaggtgcgctgtagccaggaccgatgt
gtcaactactgcgagagaggcaacgtgacgacactgtacagcggcggcgaaggaggagga
aggagagacggctcccacggaccgggcttcagagtcttcctctgtcctctgctctgtaag
aacggcggagtctgtctgcagaaggaccgctgcctgtgcccgccaaacttcaccgggaag
ttctgccaggtccccgtcacacccacagactcctctgcagccttcaccaatgagatcgtc
aagcccgttctcctctcttccatggcatccaatcaggagctggttcggtccgagttcctg
ctgccgctaggacgggacgcagagacgatgactgctggagcccccagcgggcccttggtg
aaggtcagagttcagcacccccctgaggccaacgtgaaggtccaccaggtgaaggtgtct
ggattcactcccaccctgcggacgctctcttcctcctcctcctcagggtcagcgggtgct
ccggctcctgctggcagcagagtcctggcccagactgtgaggggggacagcgtctacacc
cagcagtccggctttaagtactgcttcagagaggttaaagacggacagtgcagctctcct
cttcctggccttcggagcaaggaaatgtgctgcagagggatcggaaaggcctggggcatc
gatgactgtgtcatctgtcctgagaatacaggtcagagcgatgccagctgtccagttggg
tttgagcgagccaatggaacgcagtgtgtcgacgtgaatgagtgcctgcagccggggctg
tgtgagaacggcatctgtgtgaacaccagggggagctatagctgtgtgtgcaggctgggg
ttcatcctcgacgcctcacatgggatctgcatctcccagagtgtcatatctgaggaaaag
ggtcagtgttaccgggtcctgggttcaggtctgggtccgtcctcctgctccctgcctatc
ctcaaaagcatcaccaagcagatctgctgctgcagccgggtcggcaaagcctggggaccc
gactgccagaggtgtccgtacttcggttcagtggcctttaaggagatctgtcccgctggt
cctggttaccaatactcgccttcaactcttaaattcaaccagagagtcagcgaactggag
gggggcggcggagctgtgctggtaaacggcagcaacaaggacaaccaaggtcctgtttct
gggtccaggtctccactgaaaccccctccctctggtggggtgagtacttcgagtgccaca
ggagctgggaccagacccagccctccccagcctcaacctcagccccacccaggcgcaggc
tttcctgcctcctcctcctcctcttcgtcctcatccaggcctgtgcagcctggcagtgct
ggcacctcggccacacagggcagaacccggccttcacagagccgacctgattcaacacaa
ctgagacctcagcctccgtctgccgggagccaagcagctgatcgtttctcttcggtgcat
cgggccgatccaccgccatccagaggggactccctccccgctccgggccagccgcagagc
cccgagcgtgggtcgagacccagcgaagacctccctctggaagccagaccgcctgtgagc
ccgacgccccccagagttcagacagtacgaggcgtgtgtgagagcaggccgggtgtgtgt
ggccgcggccgctgtgtggatcagccaggtgggaaacacacctgtgtgtgcgatctgggc
ttccagctcagctcgcagcgcacacactgccaagatgtgaacgagtgtctgcagtctcca
gctgtgtgttcggtgggagagtgtgtgaacagcattggaagctacagatgtgcgtgtcca
tctggatacagaagcaacagccagcagaccagttgccaagacatcgacgagtgccagcag
aatccctgcgttaacggtcgctgtgacaacacggcgggcagctacaggtgcatctgtcgg
cttggttacaggctcgttggcaacacctgcacagacgtggatgagtgtgccgaccctctg
cagtgtccgggtcaggagtgtgtgaacactccgggctcgttccgctgtgtttcctgcccg
ccgggacacggactgctcaacaacgtctgcagagacgtcaacgagtgtcgtcagaatccc
tgctccaacggccgctgtgaaaacacgccagggagctaccgctgtgtctgtcaccatggt
tacaagctccagaacaacacctgcacagatgtggatgagtgtgcagagccatctcagtgt
cccgggcagatgtgtgtgaactctgtgggctcgtacagatgtgtgtcctgcagagcagga
ttcagactgaccgacagacagtgcacagatataaacgagtgtgaggacggcgactcctgt
cccggtcagcggtgtgtgaacactgaaggctcctacaggtgtgtggactgtcggcaggga
taccacagcgtggatggagtgtgtacagacatagacgagtgtgcgagcggcagggcgtgt
gaggcagagcgggtctgtgtgaataccgtcggctcattcaggtgcgactgtgcccccggg
tatcgaacctccggcctgggaaggcagtgtagagacattaacgagtgtttggaaggagat
ttctgtttctccagaggagagtgtgtgaacacgcctggatcctacacgtgtgtgtgctcg
cagggattcacgctgagtgagaaccggacggcctgcctcgacgtggacgagtgtgtgaag
gcgggggtgtgttcggacggtcgctgtgtgaacaccgaaggctcgttccagtgcgaatgt
caaattggcttcaccaccaaccccgaggggactgcctgccttgatgttgatgaatgcgtc
ttgtccggtggttccatttgcgggtcacagcgatgtgagaacaccattggttcctacagc
tgcctcactaactgtgagccaggctacaaggtgaaccacgctgggatctgtgaagatatt
aatgaatgtgccaacacgacagtgtgcggcgccaacgcctactgtcagaatctgtttgga
acttaccgctgtgtttgtgaccaagggttcacctccagcgccgatggaaagacctgtgtg
gatgtggatgagtgtgtgtctctgccgggtgtgtgtggctcagctcgttgtgagaacgtc
gaggggtccttcatgtgtgaatgtgaccaggcaggtcaaagctacgacacggcggctaga
cagtgcgtccacgctgcagctctagaaacagactcagtccgtgcccgccaatcctctacc
accaccacctcctcctcctcttttctcgccagtgtggtggagctgtctccgatgctgctg
ccccttcctcaggctcaccctggcgagctgagggagtgttattacaacctggcagagcgg
ggaacctgcagcctgctggccaccaacaccacccagcaggagtgctgctgcacactgggg
caaggctgggggctgggctgccagtaccacccctgccctacagcatacacagctgagttt
ctaactctgtgtcccagtgggaatggatatgttacagaaggaccaggagccttcagctac
agagatgtggatgagtgtaagcgtttccatccagaggtgtgtaagaatggcgtgtgtgtc
aacaacatcccgggatacagctgctactgctccagcggatacgtttacaacagcacgctg
ctggagtgtgttgatcacgatgagtgtgaagaggagagctgtgtgggagggatttgtgtg
aacacagtaggttcgtattactgcagctgtcagcctcctctggtcctcgacgacacccaa
cgaaactgtgtcaactcctccgacctcaatgaggatgagaacctgtccctatgctggcag
cacgtgacggcaggcctgatgtgtcagagcgctctgctgggagctcaggtcaccttcaca
gactgctgctgtctgtacgggcagggctgggggatgagctgcgctctctgtcctgccacc
gacacagcggagtatgccagtatgtgcagttcgttccctcctacacctcttttcccggcg
acttatccggactcagaaacggaagcaggtcgaagacgagggagtgcttctccaaacctg
cctccttatggactcgactacttccctgagattcccagcagagactacggtcactctgac
tatgacgattactctccagcagagggcagcaggtcaggcttcagagggagcctgccagat
gaaacgtatcgtaggcctgagtacagcactggatactactccgagggagactacgggcct
cctgacagctcccagtccagaccgcctcccttccgcattcctccagacccacgagctgac
attgggtttggagtccagcccgacagtcctcctctcagcctggcaccgctgcctggaggt
cgctacgaggagacagaggaggaagcggaggacagggcgtggaggccggggccgcccttc
cctcctttcaccgacaggagcggaggaggaggagtaccgaggaggctgtatgagaggcgt
tacgagtcgtacgccagcctgagcacagctgaggattgtgggatactgcatggctgtgag
aacggcaggtgcattcgtgttgcagagggttacacctgcgactgttaccaaggatacgag
ctagacatgaccactatgacctgcatagatgtaaatgagtgtgaggacagcgtcaggctt
gagttcccgtgcgtgaacgctcgctgcgtgaacaccgacggctcgtaccgctgcgtctgc
aggagaggatacgtcatgtctcgcagaacgaaccactgcgtggctgcttag
DBGET
integrated database retrieval system
