Oreochromis aureus (blue tilapia): 116330077
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Entry
116330077 CDS
T07295
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116330077 (toporsa)
03036 Chromosome and associated proteins [BR:
oau03036
]
116330077 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oau03037
]
116330077 (toporsa)
Enzymes [BR:
oau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116330077 (toporsa)
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116330077 (toporsa)
UBL E3 ligases
116330077 (toporsa)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116330077 (toporsa)
Cilium and associated proteins [BR:
oau03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116330077 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-C3HC4_4
RING_XB3-XBAT31
zf-ANAPC11
zf-RING_5
PWI
Motif
Other DBs
NCBI-GeneID:
116330077
NCBI-ProteinID:
XP_031608131
Ensembl:
ENSOABG00000016995
UniProt:
A0A668UBD4
LinkDB
All DBs
Position
LG6:complement(19440963..19446017)
Genome browser
AA seq
802 aa
AA seq
DB search
MSAVKLALQLSQKNGRKRSSETKSAEVSPDSKCPICLDTFSNISRLDRCLHRFCFRCILE
WSKNKAECPLCKQQFNSIYHSIKSEQDFKTYDLQPVDNGSFGYFQGVRFRYRTTLTAAHR
QMRGRMSLAPDIGIISEGPTNSSQQRPDRYMRRMMMRLAAQRRAAREGGAVASVREQEMI
NFRRELYRQGVRVRNVQDGGRSRDTSAEFYRRNPACLHRLIPWLKRELNVLYGTHGSLGN
MVQHIIMSHITRYNMEDGAIQEELRHYLHSHTEHFMHEFISFAKSPFNMEAYDQHAVYDC
PAPSSNEDSSSNSSVIAISEDEDNSTGLNHPEDSTSALSLSLWDDETPGPSYSTTAEQSR
TERLSVLDSDSDSSLEEETQEFGIPPEQMSPHNQTDLTQGKRNNEECVSSDSDDCVIVGF
VKPTADRTPEVVQLSSDSEWSVDDDTHEVPLQPQHIRFTSCSPATLHSSDRSGAGLSENV
DTDDRHHSSSKERSSKTYKKSDRKGQGRRFDSKERSKERPKSKDRHYRRKRRSRSKEQRH
SSRSPVISHSSVSTYSTEKSYSYSNGRDYPRCDRYKRDSDYTYQSYSHYSQERNDSGLHY
TQRHSYYYSSRRYSVFRSRSSSRGKDLRRRDRRRSRSRTYSSSRSPSARRKSHHDKPGGK
RKYKRRHLEDPSSTTAFNSYADGDSSALRKHKKKSKEKHHKKSKEKSRKTSRSLSVELLN
EEKAHERGRHHHKKKKKHKKKSKRHKSSERTEKRSPTIITIDSDSDSFANDSITQATNAN
NDKPADDRTDDTVDTTPADALL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagtcaagctcgccctgcaactgagccaaaagaatggcagaaaaaggtcctcc
gaaacaaaatctgcagaggtgtcacccgactccaagtgccccatctgcttggacacgttc
agcaacatttcccgccttgaccgctgcctgcacaggttctgcttccgctgcattctcgag
tggtccaagaacaaagcagagtgtccgctgtgtaaacagcagtttaattcaatttaccac
agtataaaatcagagcaagacttcaagacgtatgacctgcagccagtggacaatggctct
tttggttattttcagggagtgcggtttagataccgcacaactctcaccgcagcccatcga
cagatgagaggaagaatgtctctggctcctgacattggtataatatctgaaggcccaaca
aattcttcccaacagcggccagaccgctacatgcggcgcatgatgatgaggctggcagcc
caaaggagagctgcaagggaaggcggggcggtggccagtgtccgagagcaagaaatgatc
aactttagacgggagctataccgacagggggtgagggttcgaaatgttcaggatggtggc
cgctcccgagacacctcagctgagttttaccgaagaaatccagcctgccttcacagactg
atcccctggttgaaaagagagctgaatgtgctatatggaacccatggctctttgggcaac
atggttcaacacattatcatgtcacacattacacgttataacatggaagatggagctatt
caggaagagctcaggcactacctccacagtcacacagagcattttatgcacgagttcatt
agcttcgcaaagtcccccttcaacatggaggcatatgatcagcacgctgtctacgactgt
ccggcgccttcctcaaatgaagacagcagctccaactcatcagtaatcgctatctcagag
gatgaagacaactctacagggttaaaccacccagaagactccacatccgctttgagcctc
tcgttgtgggatgatgagacacctgggccatcgtattctacaacagcagagcagagcagg
acagagcgtctgtcagtcttggactcagactctgacagtagtttggaagaagagacacaa
gagtttgggattcccccagagcaaatgagtcctcataaccaaacagacctgactcagggc
aaacgcaataatgaagagtgtgtatcttctgacagtgatgactgtgttatcgtgggtttt
gttaaaccaacagcagatcggactcctgaggtggttcagctttcctctgactctgagtgg
tctgtcgatgacgatactcatgaagtgcctcttcagcctcaacacattcgcttcaccagt
tgcagtcctgcaactttacatagcagtgatcgcagtggggctggactatcagaaaatgta
gacacagatgatcgtcaccactcaagttcaaaagaaaggtcaagcaagacgtataagaag
tcagacagaaaaggtcagggtagaagatttgacagcaaagagagatctaaggagaggccc
aaatcaaaggacagacactataggaggaagaggaggtcaagaagtaaagagcagaggcac
tctagcagaagcccggtgatctcccacagcagtgtcagcacttattccactgaaaaaagt
tattcttactccaatggcagagactaccccaggtgtgacagatataaaagggacagtgat
tacacctaccagtcatatagccattacagccaagagagaaatgatagcgggctccattac
acacagaggcactcgtactattacagcagccgcagatactcagttttccgctcccgctcc
agtagccgcggcaaggacttgcggagacgggacaggaggcgctctcgatccaggacttat
tccagcagccgttccccttctgccagaaggaaatctcatcatgacaagcctggtgggaag
aggaagtacaaaagaagacatttagaggacccctccagtaccacagcatttaactcctat
gcagatggtgactcctctgcattaagaaaacacaagaaaaaaagcaaagagaagcaccat
aaaaaatccaaagagaagtctagaaagaccagcaggagtctcagtgtggagctcctcaat
gaggaaaaggcacatgagcggggcaggcatcaccataagaagaaaaagaaacacaagaag
aaaagcaaaaggcacaagagtagcgaacgcacagagaagcgttcacccactatcattacc
attgatagtgacagcgattcttttgctaatgacagtatcactcaggccactaatgctaat
aatgataagcccgcagacgataggacagatgacacagtagacactacccctgcagatgca
ctgttgtaa
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