Oreochromis aureus (blue tilapia): 116330117
Help
Entry
116330117 CDS
T07295
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116330117 (lrba)
Membrane trafficking [BR:
oau04131
]
Endosome - Lysosome transport
Others
Others
116330117 (lrba)
Endosome - Golgi transport
116330117 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
116330117 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
EIF3I
Tti2
SUKH_6
Motif
Other DBs
NCBI-GeneID:
116330117
NCBI-ProteinID:
XP_039468872
Ensembl:
ENSOABG00000003474
LinkDB
All DBs
Position
LG6:16338460..16511584
Genome browser
AA seq
2916 aa
AA seq
DB search
MASEETAGAAPPGEGKDGRPGAVGLNPGVPIRGIRMKFAVLTGLVEVGEVSNRDIVETVF
NLLVGGQFDLEMNFIIQEPESIVCMVELLDKCEPNCQAEIWSIFTAILKKSVRNLQACTE
VGLIQLVLQRISTIDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGEQGQWPRHAVKL
LSVLKYMAHRSGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWIRMDPLNNINVDKD
KPYLYCFRTSKGMGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTLVHIYNR
WKNSEIACFVNGELASFGDIAWFVNTSDTFDKCFLGSSETADINRVFCGQMGAVYLFGEA
LSAAQILAIYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLSSSIAFTYNPRATDAQL
CLESSPKDNVSIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYCQPSS
NELDTSVCCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRPVLDIVLA
FSRYLSNLQNGILLLKQLCDHILFNPAIWIHAPAKVQLTLYTYLATEFISTVTIYNAIRR
VGTVLQIMHTLKFYYWVVNPQDRSGIVPKGLEGPRPNQKEILSLRAFLLLFVKQLIMKDH
GVKEDELQSILSYLLTMHEDDNLMDVLQLLVALMSEHPGSMIQAFDQRNGIRVIYKLLAA
KNEGIRVQALKVLGYFLKHLSPKRKAEVMLSHGLFSLLTERLMLHSSHFTMTMYNVLFEI
LTEQICTQVIHKQHPDPDSTVKILNPQILKVIAALLKNSPPSQESMEVRRVFLSDMIKLF
NNSRENRRSLLQCSVWQEWMLSLCFINPQNNEEQKITEMVYAIFRILLYHAIKYEWGGWR
VWVDTLSITHSKVTFEQHKENLSRMFRQYQHQESTGTIRSISGVSQSSETMECVNGPPAE
ETAPSTVIELTVDKLSQKSPDSASSSTITSSPLEADDERGHASITVSNILAGAKDEEQEQ
QQLVEESTRDCSGVREETQKGATEQASEDVNKEKAQTSTGKTAQHETADTKAVDEGKVSA
PSGSDDAQTPVTDDEKSESEQNKGDSSNSMTEDSLNEAEAEPPAASERENSVLGGASVLN
EDLVDVSSVSDQVHPSDADDSQEESSYASAATGEEGGEVKKDEDEQKDGGEELELNKEEE
KVETQESEVKQAPCVESQTPPAEIPEKSVTEAPKEKAGDEQSSSIAGTTTTSQQPSDTTP
PSTVQEVTAASDSTADVQPSETSGATGEETPSSAADSSTTTTSTSSDTQKSAESVSKTKE
IKIARLDVSNVALDTERLELKETSATETSQGQSAAAASTATGSSSGQPTDSSTSAPRSTM
FRIPEFRWSHMHQRLLTDLLFSIETDVQMWRSHSTKTILDFVNSSENVVFVHNSIHLISQ
VVDNLVMACGGILPLLSAATSSSHELENIEPSQGLSVEASVTFLQRLINLVDVLIFASSL
NFTEIEAEKNMSSGGILRQCLRLVCAIAVRNCLECQQAQFKHGADSSARSHTAMPSTLLG
TAKSASAQSPVDAVTGGMSPVRDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYF
ISVLMVSKYRDILEPHNDKKHPQRSQSARSTGSTEGENGFSLRRYDSGIGDDHTSTAASD
ADLSSSGGTHGPDAISEALSTLSSEVRPAVSADSKGKNVKDILRSLVSAPTDDIVVDPSL
LPPAFLGSVSDAAREPSPQFRSFDRSVIVGPKKAGVMPSPGTSTPVLTTASVSGGTPIDS
VSVVSSSDASQSTSADSAASGGQVPASTSLPSVPPLSPVTQNTAPNMSISERLEHALEKA
APLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQ
KNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFILSRQRAEDIHKHAEFESSCAQYAAD
KRDEEKLCDHLIRAAKYRDHVTATQLIQKIVNILTDKHGAWGRSSISRPRDFWRLDYWED
DSRRRRRCVRNPFGSSHSEATLKAVAEHGQSHPPVADISASEDDILKGKQSIRSQALGNQ
NSESEASLDGDDDTLSSLEDKDLENVTGPVNMSTSAQLVAPAVVVKGTLSITASELYFEV
DEEEPSFKSIDPKILAYTEGLHGKWLFSEIRAVYARRYLLQNTALEVFMANRTEVMFNFP
DAATVKKVVHSLPRVGVGTNFGLPQTRRISLATPKQLFKASNMTQRWQRREISNFEYLMF
LNTISGRTYNDLNQYPVFPWVITNYDSEELDLTLPSNFRDLSKPIGALNPKRAAFFSERY
ETWEDDQVPKFHYGTHYSTSSFTLMWLLRIEPFTTFFLNFQGGKFDHADRTFSSVSRAWR
NCQRDTSDVKELIPEFYYLPEMFVNANNYNLGVMEDGTVVSDVDLPPWAKTPEEFVRINR
LALESEFVSCQLHQWIDLIFGYKQQGPEAARALNVFYYLTYEGAVNLSSINDPMLREAVE
SQIRSFGQTPCQLLIEPHPPRSSAMQVTPLMFTEQMQQDVIMVLKFPSNSPVTHVAANTQ
AGLTSSAIITVTANRLFAVNKWHGLTGHQGSTVQDQQYQLPVEIDPLIASNVGLHRRQIA
DLLDQSIQISSQCFVITADNRFILLCGFWDKSFRAYSTDTGKLTQIVFGHRDVVTCLARS
ESYIGGDCYVLSGSRDATLLLWYWNGKHSSIGESPGTGFITPRTILTGHDCEVTCASVCA
ELGLVISGCKEGPCLIHSMNGDLLRTLEGPGRCLRPRLIQSSTEGHCVIYYDKGQFCLFS
VNGKLLRHMEVEDGIKAMLLSRDGQYLLTGGDGGVVSVWQVHNLKQLFTYPGCDAGIRSM
AMSHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8751 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggagacagcgggcgctgcaccgccaggtgaagggaaggacgggcgacct
ggcgccgtggggctcaaccccggagtgcctatcagggggataagaatgaaattcgccgtg
ctcaccggcctggtggaagttggggaagtttccaaccgagacattgtggagacggtgttc
aacctgctggttggcggccagtttgacctggagatgaacttcatcatccaggaaccggag
agcattgtgtgcatggtcgagctgttggacaagtgtgagcccaactgtcaggctgagatc
tggagcatcttcaccgccatcctcaagaagagtgtccgcaacctgcaggcgtgcactgaa
gtggggctcattcagcttgtgctccagcgtatatccaccattgacagcatgatcgcagac
ctgctggtggacatgctgggtgtacttgccagctacagcatcacagtcaaagagctgaag
cttttcttcagcaagctgcaaggggagcaagggcagtggcctcgtcacgcagtgaagctt
ttgtcagtgctaaagtacatggctcacaggagcggccccgactccttcttcagcttccca
ggaaaaaatgcagctgcaatagctctgccccccatagcaaaatggccatatcagaatggg
tttacatttcacacgtggatccgcatggatccactcaacaacatcaatgtagacaaagac
aagccttacctgtactgtttccgtaccagcaaaggcatgggttactcggcacactttgtg
ggcggctgtttgatagtgacctcattaaaatcgaaggggaaaggattccagcactgtgta
aagtatgacttcaaaccgcagaagtggtacatggtgactctagttcatatctacaaccgc
tggaaaaacagtgaaattgcctgctttgtgaacggtgaactggcttccttcggagacatt
gcctggtttgtcaacaccagcgacacatttgacaagtgtttcctgggatcgtctgagacg
gcagatatcaaccgtgtgttctgcggacagatgggggcagtgtacctgtttggagaagct
ctcagcgctgctcagatccttgctatctatcagctgggtccgggctaccagggcacattc
aagtacaaggctgagagtgacttgttgttcgctgagcatcataagaccttactgtatgac
ggcaagctgtcttctagtattgccttcacttacaatccccgagccacagatgcccagctc
tgccttgagtcctccccgaaggacaatgtctccattttcgtccactcaccccatgcgctc
atgctgcaggatgtgaaagctgtggtgactcactcagtccagagcggcatacactctatc
ggtggtgtgcaggtcctcttcccactgtttgcacagctggattactgccagccttccagc
aacgagctggacacctctgtctgctgcactttgctatcctttgtgatggagctcttgaag
aactcagtggctatgcaagagcaggtcttggcctgcaaaggcttcctcgtcattggctat
actttggaaaagtcttccaaggtgcatgtgacgaggcccgtcctggacattgtactggcc
ttttccagataccttagcaacttgcagaatgggatcttgctgctcaagcagctgtgtgac
cacattctgttcaaccctgccatctggatccatgcccctgccaaggtgcagttgacactc
tacacctacctggcgacagagttcatcagcacagtgaccatttacaacgctattcgcagg
gtgggcactgtgcttcagatcatgcatacactaaaattctactactgggttgtcaaccct
caggaccgcagtggaatcgtacccaaaggcctagaaggtccaaggccaaatcagaaggag
atactctctttgcgagcctttctgctgctgtttgtcaagcagctcataatgaaggatcat
ggagtaaaggaagatgagctacagagtatcctcagctacctcctaaccatgcatgaggac
gacaatctcatggatgtgctgcagctgctggtcgctctcatgtctgagcatcctggatcc
atgattcaggcctttgaccagcggaatgggattcgtgtgatttacaagcttttggccgcc
aaaaatgagggaataagagtccaagcactcaaagttttgggctactttctgaaacacttg
tcaccaaagaggaaagcagaggtcatgctgagtcacggcctgttctccctgctcaccgaa
cgcctgatgctccactccagccacttcaccatgacaatgtacaatgtgctttttgagatt
cttacagagcagatctgcactcaagtgatccataaacagcatccggaccccgactccact
gtgaagattctcaacccacagattctgaaggtaatagctgctctgctgaagaactctccc
ccctctcaagagagcatggaggtgcgcagggtctttctgtcagacatgatcaaactgttc
aataacagccgagagaaccgcaggagcctgctgcagtgctctgtgtggcaggagtggatg
ctctctctgtgcttcatcaacccgcaaaacaacgaggagcagaaaatcacagagatggtg
tacgccatcttccgcatcctgctctaccacgccatcaagtatgagtggggcggctggcga
gtctgggtggacaccctgtccatcacgcactccaaggtcacgtttgagcaacacaaagag
aatctgtcccgtatgttccgtcagtaccagcatcaagagtccaccggcacgattcgctcc
atctctggtgtcagccaaagctctgagactatggaatgtgttaatgggccacctgcagag
gaaactgctccctccactgtcattgagctgactgtggacaagctgtcccagaaatcccct
gattcagcatccagttccaccattacttccagcccgctggaggctgatgatgaaagggga
cacgcatccatcactgtgtccaacatcctggctggggccaaagatgaagaacaagagcaa
cagcagctggtggaggagtctaccagagattgctcaggtgtcagagaggagacacaaaaa
ggtgctacagagcaggcgagtgaagacgtcaacaaagagaaagcacagacttctactgga
aaaactgcacaacatgaaacggctgacacgaaagcggtggacgagggtaaagtctctgca
ccatctggtagcgatgatgcacagacacctgtaacagatgatgaaaaatctgaaagtgaa
cagaacaaaggtgactcgtcaaactcaatgacagaagactctttaaatgaagcagaggct
gaaccgccagcagcttcagagcgggaaaacagcgtgctcggtggagcttccgtcctcaat
gaggacctggttgacgtgtcatctgttagtgaccaggtccatcctagcgatgctgatgac
agccaagaggagtcctcttatgcttctgctgccaccggagaggaaggtggggaagtgaag
aaggacgaagatgaacaaaaagatgggggcgaagaactggagctgaataaggaagaagaa
aaagttgagacacaggaaagtgaagtgaaacaggcaccttgtgtggaaagccagactcct
ccagctgaaatacctgagaaaagtgtcacagaagcacctaaagaaaaagctggagatgaa
cagtcttcctccatagctggaactactactacaagccagcagccctcagacaccacaccg
ccatctacagtccaggaggttacagcggcatcagactccactgcagatgtccagccatca
gagaccagcggcgccactggagaagaaaccccatctagtgccgctgacagtagcaccacc
accacctctaccagctccgacactcagaagagtgcagagtctgtcagcaaaaccaaagaa
atcaaaattgccagactggacgtgtccaatgtggccttagacaccgagagacttgaactg
aaggagacctctgcaacagaaacaagccaaggtcagtcagcagctgctgcatcaacagcc
acaggaagctcttcaggccagccaacagacagcagcacctctgcacctcgctccaccatg
tttcgcatcccagaattccgctggtcccacatgcaccagcgtctcctcactgacctgctc
ttctcgattgagacagatgtccagatgtggagaagtcactccacaaagacgattctggac
tttgtaaacagcagcgagaatgtggtgtttgtccacaacagcatacacctcatatcccag
gtggtggacaatctcgtcatggcttgcggaggcattttacctctcctctcagctgccaca
tcttcctcccatgagctagaaaacatcgagccctcccagggcttgtcagtggaggcttcg
gtcaccttcttgcagcgcctcatcaaccttgtggatgttcttatttttgccagctcgctt
aacttcacagagatagaagctgagaaaaacatgtcatcaggaggcatcctccgacagtgc
cttcgcctcgtgtgtgctattgcagtgagaaactgtctggagtgtcagcaagcccagttt
aagcacggcgcagacagctcagcccgcagccacacagccatgcccagcactttgcttgga
acagccaagtctgcatctgcgcagagtcctgttgatgctgtgacaggtggcatgtctcca
gtgagagatttggaccggctgcttcaggacatggacataaaccgcctcagggctgtcgtc
ttcagagacattgaggacagtaagcaggctcagtttctggctcttgccgtcgtctacttc
atctcagtcctcatggtgtccaagtaccgtgacatcctggagccccacaatgacaagaaa
caccctcaacgctcccagtctgcaaggagtacaggtagcacagaaggagagaacggcttc
tctctgcgccggtatgattccggcatcggagatgaccacacctcaactgccgccagcgac
gcagatctgtcatcctccggtggaactcacggtcccgatgccatttcagaggccttgtcc
acgctgtcatctgaggtcagacctgctgtgtctgctgactcaaagggtaaaaatgtgaag
gacattctgcgcagcctggtgagcgctccaactgatgatatcgtggtggatccaagcctg
ttgccgccagcgttcctgggaagtgtgagcgacgcggccagagaaccatcgccgcagttc
cgctcttttgatagaagcgtcatcgttggaccaaagaaagcgggtgtgatgccatctcca
ggcacttccacccccgtcctgacaaccgcctccgtgtctggtgggacacctatcgacagc
gtctctgtggtatcttctagcgacgcctcccagagcacctctgcagactctgcagcctca
ggcggccaggttccagccagcactagcctgccatctgtccccccactctcccctgtgacc
cagaacacagcccccaatatgagtatctcggagcgtttggagcatgcccttgaaaaggcg
gctcccctgctgagggagatctttgtggactttgccccttttctctctcgcactctgctg
ggcagccatggacaagagctccttattgagggcaccagtctggtgtgcatgaagtccagc
agctcagtggtggagcttgtcatgcttctgtgttcccaggaatggcagaactccatccag
aagaatgccggcttagcctttatcgagctggtaaacgaaggcaggcttttgagtcacacg
atgaaggaccacctggttcgtgtggctaacgaagctgaattcatcctcagccgacagagg
gccgaagacattcataaacatgcagaatttgagtctagctgtgctcagtacgcagcagac
aaacgtgatgaggagaaactgtgcgaccacttaatccgtgcggccaagtaccgcgaccat
gtgacagccacgcagctcatccagaagatagtcaacatcctgactgacaaacatggagcc
tggggcaggtcttccataagcaggccgagggacttctggcgcctagactactgggaggac
gattcaagacggcgacgtcgctgcgtcaggaacccctttggatccagtcactcagaagct
acgctcaaagctgtggctgaacatggtcagtctcatccaccagtggctgatataagtgca
tccgaggacgatattctcaaaggcaagcagtccatcaggagccaggctctgggaaatcaa
aactcggagagcgaggcatcccttgacggagatgatgacactctgtcgtcactagaggac
aaggacctggagaacgtcacaggcccagtaaacatgagcaccagcgctcagctcgtggct
ccggctgtggtggtaaaaggcaccctgtccatcaccgcctccgagctctacttcgaggtg
gatgaagaggagcccagcttcaagagcatcgatccaaagattctagcctacacagaaggt
cttcatggaaaatggctgttctcggagattcgtgccgtctatgccagacgctacctcctg
cagaatactgctttggaagtcttcatggccaacaggacggaagttatgttcaacttccca
gatgcagccacggtaaagaaggtggttcacagtcttcctcgtgttggcgtgggcacgaac
tttggccttccacagaccagacgcatctctctggccacacctaagcagctgttcaaggcg
tccaacatgactcagcgctggcagcgccgtgaaatatccaactttgagtacctgatgttt
ctcaacaccatctctggccgtacctataatgacctaaaccagtacccagtctttccatgg
gtcatcaccaactatgactcagaggaacttgacctcactctgcccagcaattttagagat
ctgtctaagcccatcggtgctcttaaccccaagagggcagcattcttttcagagcgatat
gagacctgggaggatgatcaggtgccgaagttccattacggcacccactactccacctcg
agcttcaccctgatgtggctgctacgtattgaacccttcaccacgttcttccttaacttc
caaggaggaaagtttgatcatgctgaccgtaccttctcctcagtatccagggcttggagg
aactgccagagagacacatctgatgttaaggagctgatcccagagttctactatcttcct
gagatgtttgttaacgccaacaattacaacctgggagtgatggaggatggcactgtagtc
tctgatgttgatctgccaccttgggccaaaaccccagaagaatttgtgcgcattaatcga
ctggcactggagagcgagtttgtgtcctgccagcttcaccagtggatcgatttgatcttc
ggctacaaacagcagggacccgaagccgccagagccctcaatgttttctattatctgacc
tatgaaggcgcagtcaacctcagctcgatcaacgaccccatgctcagagaggctgtggag
tctcagattaggagtttcggacaaaccccctgccagttgctaatcgagccacacccgcct
cgaagctcggccatgcaagtgacgcctctgatgtttacggagcagatgcagcaggatgtt
atcatggtactgaagttcccatccaactctcctgtgacacacgtagcggccaacacccag
gcaggtctgacgtcatctgccatcatcactgtcaccgccaaccgcctctttgcggtcaac
aagtggcacggcctgacaggtcatcagggatcaacggtgcaggaccagcagtaccaactt
cctgtggaaatcgaccctctaatagccagtaacgtgggtcttcaccgtcggcagatcgca
gacctgctggatcagagcattcagatcagctcgcagtgttttgttatcacggctgacaac
cgcttcatccttctgtgtggtttctgggacaagagcttccgggcctactccactgacaca
ggcaaactgacccagatagtgtttggacatcgggatgtggtgacgtgtctggcacgctca
gagtcgtacatcggaggcgactgctatgtcctgtcgggctcgcgagatgccaccctgctg
ctgtggtactggaacggaaagcacagcagcattggagagagcccaggcacaggctttatc
acaccgaggaccatccttacaggccacgactgtgaggtgacttgtgcaagtgtgtgtgct
gagttgggtctcgtcatcagcggctgtaaagagggtccttgtctgatccattccatgaat
ggggacctgctgcggaccctggagggaccagggcgctgcctccggcctcgcctcatccag
tcctccaccgagggacactgcgttatctattatgacaagggacagttttgcctcttcagt
gtcaacggcaaactgctgaggcacatggaagtggaagacggcatcaaggctatgctcctc
agccgtgatggccaatacctgctgacaggcggcgatggaggcgtagtatctgtttggcag
gtccacaacctcaaacagctgttcacctatccgggctgtgacgcaggaatccgctccatg
gccatgtcacatgaccaaaggtgcatcataaccggcatggcatccggaagcatcgtcctc
ttctacaacgacttcaacaggtggcatcacgagtaccagaccagatactga
DBGET
integrated database retrieval system
