Oreochromis aureus (blue tilapia): 116330166
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Entry
116330166 CDS
T07295
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor isoform X2
KO
K20286
TATA element modulatory factor
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116330166 (tmf1)
Membrane trafficking [BR:
oau04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116330166 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
SlyX
Motif
Other DBs
NCBI-GeneID:
116330166
NCBI-ProteinID:
XP_031608261
Ensembl:
ENSOABG00000023610
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All DBs
Position
LG5
Genome browser
AA seq
1150 aa
AA seq
DB search
MSWFNASHLSSFAKQALTSAQKSIDRVLDIKEEDQWGGTTVMPHDDVTLPGKLSLSGGWG
LTQWEAPSEEKAITPPPSSEAITTPVTRTVVDESENFFSAFLSPGDSQAVTKTQVVSVPP
TKSQRRPQEKEKKSKEAVVQKDVESQMSIVVEGPQSGPADKIHESQKAAEIQVVEAKPSP
ADTVLLQPVSPVSSSSDLPCDSDSKASSVKTDADSVVSVDSKAEQSHTSVEQQPEKDTTD
SPQPKSAAPSDPSPPVSTKEVLLEHKDSKTEDRQNDTPSPPVSAFSSGTSTTSDIEVLDH
ESVLSESSASSRQETGEGKTGLHLMQGSFQLLTASTCGDFPRLEDYPKLTESCGSSSDAF
ERIDSFSVQSLDSRSVSEVNSDDEIPGSRTLASVTAGPAPLTVQQAECQKQEGGEAAKVD
EKEEDDEEGFTETMREQSLDEMEESGRSATPVNSEQPEDLTEQEANLTLSDATAAAEEPI
TPPITAEMKSASTVQILELQKVIDELSGRLEKRESQLLAVSKDKARLEEECDNLKDEVIG
LKEESSTVQSLKEEFTQRIAEAERKAQLACKERDIAKKEIKGLREELSTRLNASDTMEII
KEKEEQIRGLLEEGEKLSKQQLQHSNIIKKLRVKEKESDTKITKQQKKIKDQEEELRQLQ
QVLDGKEEVEKQHRENIKKLNGVVERQEKELSRLQSDTEELQEKNRSLEAALDNSYKELA
ELHKVNASRASEAEEVALSRETQAREQLSLALEKAQEEAKIQQEALANQVADLRLALQRA
EQQQARKEDYLREEISELQQRLQDAETRNQELSQSVTSATRPLLRQIENLQASLGGQTAS
WEKLEKNISDRLADAQAQLAIAVEKERSATEELLSIKSQLASLESQNSLLRQEKARLLAQ
LDGEKNKREKLEDESSRDHVELENLRGEHSRMLEETKKEKLLLTNQLEMEKMKVEQEKKK
CYLAQEALKEKERKATAPLVGEAPASSTPSLSRSSSMSGADNGLHTSVLSQDDSLDHSLG
TMSVSMSGTNLYEAARLSGGSSIIENLQSQLKLREGEIAQLQLEITNLERRRSVMAQELV
RLTNQNDEMEEKVKEIPKLKVQLKDLEQRHNTILQMYGEKAEEAEELRLDLEDVKNMYKT
QIDELLKNQK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcatctcacctgtccagcttcgctaaacaagctttaacatcagct
cagaagtcaatcgaccgagttctggacatcaaagaggaggaccaatggggtggtacaact
gtaatgccccacgacgatgtcacattacctggaaagctttcattaagtggaggatggggg
ctgacacagtgggaagcaccctccgaggaaaaggccatcacaccacccccttcatcggaa
gccatcactactcccgtcactcgtactgttgtggatgaatccgaaaattttttcagtgcc
tttttgtcacccggagattcacaggctgtcaccaaaactcaggttgtgtctgtaccccct
actaagtctcaaaggcggcctcaagagaaagaaaagaaaagcaaagaggctgttgtccaa
aaagatgtggagagtcaaatgtcaattgtggttgagggtcctcaatctggacctgctgat
aagatccatgagagtcagaaagctgctgagatccaggtggtggaggccaagccctcacca
gcagacactgtcctcctgcagccagtttctcctgtttcctcttccagtgatcttccttgt
gactctgacagtaaagcaagcagtgtgaaaacagatgctgactcagtagtttctgttgac
tcaaaagcagagcagtcacatacttcagtagaacagcaaccagagaaggataccacagat
tcccctcaacctaagagtgctgccccttctgatccgtcacctcctgtatccactaaggaa
gtactcctagagcataaagactcaaagacagaggatcgtcagaatgatacaccctctcct
ccagttagtgctttctcctcaggaacctcaaccaccagtgacattgaagtgcttgaccat
gagagtgtgttgagcgagagctcagccagctctagacaagaaaccggtgaaggaaagact
ggccttcacctaatgcagggctccttccagcttctcactgcctccacatgtggagatttt
cctcgactagaagactacccaaaactcacggagagctgcggttcctcctcagatgcattt
gagcgtattgattcctttagcgtgcagtcactggatagccggagcgtcagtgaggtcaac
tcagatgacgaaatccctggcagtcggactctagcatccgtcactgcgggtcctgcccct
ttaacagtgcaacaagctgaatgtcagaagcaggaaggtggagaggcagcaaaggtagat
gagaaggaagaagatgacgaggagggattcactgaaacaatgagggagcagtcgctggat
gagatggaggaaagcggacgaagtgcgacacctgtgaatagtgagcagcccgaagacttg
acagagcaggaggctaatctcacactgtctgatgccacagctgcagctgaagaaccgatc
actccaccaatcactgcagaaatgaaaagtgcctcaactgtccagatactggagcttcaa
aaggttattgatgagctatcggggcgccttgagaagagagagtctcagctgctggcagtt
agcaaagacaaggccagactggaggaggagtgtgacaatctgaaagatgaagtgataggt
ctgaaggaggagagctccactgttcagtccctgaaggaagagttcacccagcgtatagca
gaggcagaaaggaaagctcagctggcctgcaaagagagagacatagctaagaaggagata
aagggcttgcgagaggagctttccacaagactaaacgccagtgatacaatggagatcatc
aaggagaaggaagagcagatcagaggtctgctggaagagggtgaaaagctgtccaaacag
cagctacagcacagcaacatcatcaagaaactgcgtgtaaaggagaaggagagtgacaca
aagatcaccaaacaacaaaagaaaatcaaggatcaagaggaagagctgagacagctccag
caggttctagatggaaaggaggaggtggagaaacagcacagggagaacatcaagaagctg
aatggtgtggtggaacgccaggagaaggagctgagcaggctgcagtcagacactgaggag
ctgcaggagaaaaacaggagcctcgaggctgctctggacaactcttataaggagctagca
gaactacacaaggtaaatgccagcagagccagtgaggctgaagaggtggctctgagcagg
gagacgcaggccagagaacagctgagtcttgctctggagaaggctcaggaggaggccaag
atacaacaggaagccctagcaaaccaggtggctgacctgaggctggcactgcagagagca
gagcaacagcaggccaggaaagaagattatttgagagaggagatcagtgaacttcaacag
agacttcaggatgcagaaactaggaaccaggagctcagccagagcgttacctctgccacg
cgacctttactgcgacaaattgagaacctacaggcctcactgggcggtcaaacggcctcg
tgggaaaaacttgagaagaatatctctgacaggcttgcggatgcccaggcgcagctagcc
attgctgtggagaaagagcgatcagcaacagaagaactgttgtccattaaatcccagtta
gcctctctggaatcccagaattccttgctccgccaggagaaagccaggcttctggcacag
ctggatggcgagaaaaacaagcgggagaaattggaagatgagagcagcagggatcatgtt
gaattggaaaacctgcgaggagaacacagtcgaatgttagaggaaaccaagaaagaaaag
ttactgctgactaatcagttagagatggagaagatgaaggtggagcaagaaaagaagaaa
tgctatttggcacaggaagcactcaaggaaaaggagcgaaaggccacagcaccattggtt
ggagaggccccagcatcatctacaccctccctgtctcgctccagctcgatgagtggggcg
gacaatgggctgcacacctctgttctttcacaggatgactctttagaccattcgctgggc
actatgtccgtatcgatgagtgggaccaacctgtatgaggcagccagactttctggaggc
tccagcattatagaaaacctccagtctcaactcaaactgagagaaggagagatagcacag
ctgcagcttgagatcactaatctggagaggagacgatctgtgatggcacaggagctggtt
cgactcacaaatcaaaacgatgagatggaggagaaggtgaaggagatccccaagttgaaa
gttcaactgaaggatctggagcagaggcataacaccattctgcagatgtatggagaaaag
gctgaagaagcagaggaactgagactggaccttgaagatgtaaagaatatgtacaaaacc
caaatcgacgaattgctgaagaaccagaaataa
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