Oreochromis aureus (blue tilapia): 116330215
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Entry
116330215 CDS
T07295
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oau04040
]
116330215
Ion channels [BR:
oau04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116330215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
116330215
NCBI-ProteinID:
XP_039473991
Ensembl:
ENSOABG00000011045
LinkDB
All DBs
Position
LG10:12277865..12285844
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AA seq
1028 aa
AA seq
DB search
MENLTPEQWREIMSKKMRFSPELISAIQEGKTALLCGLLKTGDGITRQLDESEDRQWREA
LNLSIRLGNEDAMDALLQGVKFDFRQIHEALLVAVDTNQPIVVKRLLDRLDQEKGNKMDV
RSFSQAIFDRSVDNSQFAPGVTPLTLACQKDLYDIVTMLTQKGHVIPWPHKISCACLECS
NGRQYDLLKFSLSRINTYRGIASRAYLSITSDDAMLSAFSLSKELRKLSQKEPEFKPQYL
SLEQICQEFAVELLGMCRNQSEVSTILNSCGNETQDSLDEQAFEEGIPSLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGKLEGWRGSRTAWKLFVSVGIFLTMPLLCLVYWIAPKSKLG
KLVRIPVIKFLLHSASYLWFLITLLGESITMELYRDTFASRQQNLLHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFALRVLILLKGFFLCHDHDGTEECVYF
TQTSRDNWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNIYVPYVISPNLGRFNETFRFLFWTMFGVVNQDYVDMPEFVFAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAIFYILRGIFRRICCCCCTCSSEQKYPPIASISNDKGSEDGQLSYRQQVIR
ALVQRYIESARREFEETKRKDIGNRMTELSKVVARMHNDLKVAQQYAMDDGQDTSDALTK
NGSSVLGKYIIGAKNNFRGFNTRQDDKYTALKVTVHSNEEKLDKEKFEAQMESDIQQNEV
DECRDEGQFPDSVVVKMEEGRAQAEQEEKKEIKSDEKEEAAKSEISVNKVKEEKKGGNGF
NTEETVSDEATNEEAETLSEGGMNKEGRVTDEHMTSAHAESIEVSETKQIISKFNHIELQ
EKKAAQPSWMKGRKPEHNVAEKPHNEKSNEKPEMKKMIPSPTGSSSSQDTGFGSQEGEES
IDGTPVRP
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctaacgccagagcaatggcgagagattatgagcaagaagatgcggttctct
ccagagctcatcagtgccattcaggaggggaaaacagcgctgctgtgcggactgttgaag
acaggtgacggcatcacccgccagctggatgagtctgaggatcgccagtggagggaggcc
ctcaacctctccatccgcttgggcaacgaggatgccatggacgccctcctgcaaggagtc
aagtttgacttccggcagattcatgaggctctgctagtcgccgtggacaccaaccagcca
atagtagtgaagcgtctcctggaccgcttggatcaggagaaggggaacaagatggacgta
cgatccttctctcaggccatatttgatcgttctgttgacaactctcagtttgcccctggt
gtgacccctctgactttagcctgccagaaagacctgtacgacattgttaccatgctcacc
cagaaaggccacgtcatcccgtggccacataagatctcctgtgcctgtttggagtgttct
aacggccggcagtatgacctgctgaagttctccctgtctcgcatcaatacttatcgtggc
attgccagccgtgcctacctgtccatcacctctgatgatgccatgctcagtgccttcagt
cttagcaaagaactccgtaagctgtcgcagaaagagccagagttcaagcctcagtacctg
agcctggagcagatctgtcaggagtttgcagtggagttgctgggcatgtgtcgcaaccag
agtgaggtatccactattctgaacagctgtggaaatgaaactcaggattccttggatgag
caagcctttgaggaaggaatccccagcttgtctcgcctgcggcttgcagtcaactacaac
cagaagcagtttgtggcgcacccaatctgccagcaggttctgtcctctatctggtgtggg
aaactggaaggctggagaggtagcagaacggcctggaagctgtttgtctctgtgggaatc
tttcttaccatgccccttctttgccttgtctactggattgcaccgaagtcaaagctggga
aagctagtaagaattcctgtgatcaagtttcttcttcactctgcatcctacctgtggttt
ctcattacattacttggggaatcgataaccatggagctatatcgggacacgtttgcttcc
cggcagcagaaccttctgcacagctccttccacatggtgtgggtggtcggattcttctgg
tatgagtgtaaggaagtgtggatcgaggggcttcggagttacttcctagactggtggaac
tgcttggacgtgatggtgctcagcatgtacctggcatcttttgcgttacgtgtgcttatc
ttgctcaaaggtttcttcctctgccatgatcatgatggcacagaggagtgtgtctacttc
acccagacttcacgtgacaactggcaccaggaagatcctcagctgattgccgaggtgctc
tttgcagtgaccagcatgttaagcttcacacgactggcatatatcctgccagcccacgaa
tctctgggaacactacagatctccatcggaaagatgattgatgatatgatgagatttatg
ttcatactgatgatcattggcaccgccttcctttgtggtatcaacaacatctatgttcct
tatgtcatttctccaaatcttggcaggtttaatgagaccttccgcttcctattctggacc
atgtttggcgttgtaaaccaggactatgtggacatgccagagtttgtgtttgcagaattt
gtaggaaggatcctgtatggtatcttcactcttgtcattgtcattgtccttctcaacatg
cttattgccatgataacaaactcctttcaaaaaattgaggatgatgctgacgttgagtgg
aaatttgccaggtcaaagctgtacctcagctacttcagagagggcctcacgatgcctgtg
cctttcaacatcatcccctcccccaaagccattttttacatcctgaggggcatctttaga
cgaatctgctgctgctgctgcacttgttcgtctgagcaaaaatatccccccatagcctct
atatccaatgataaggggtctgaagatggccagttatcgtaccgtcagcaggtgatcagg
gcactggtgcagcgctacattgagtcagctcgcagggagtttgaggagaccaagaggaaa
gatattggaaatcgaatgactgagctaagtaaagtggtcgccaggatgcacaacgatctg
aaagtcgcccagcagtatgcaatggatgatggacaggatacaagcgatgcactgaccaag
aatggctcctctgtactggggaaatacatcattggtgccaagaacaatttcagaggtttt
aacaccagacaagatgacaaatacacagctcttaaggtgactgtgcacagcaatgaggaa
aagctggataaagaaaagtttgaagcacagatggaatcagacattcaacagaatgaggtg
gatgaatgtagagacgagggacagtttcctgactctgttgtggtgaaaatggaggaaggc
cgagctcaggctgaacaagaggaaaagaaggaaattaagtcagacgagaaggaggaagca
gccaaaagtgaaattagtgtaaataaagtgaaagaggagaaaaaaggaggaaacggtttt
aacacagaagaaacggtgagtgatgaggccacgaacgaagaggcagaaaccctaagtgaa
ggagggatgaacaaagagggaagagtgacggatgaacacatgacctctgcacatgccgag
agcatcgaagtgagtgaaaccaaacaaataatcagcaagttcaatcacattgagctgcaa
gaaaaaaaagcagcacaaccgagctggatgaagggaagaaagcctgagcataatgtagca
gagaagcctcacaatgagaagagcaatgaaaaacctgaaatgaagaaaatgattccttca
cctacaggaagcagcagctcccaggacacgggctttggttcccaagaaggggaagaatcg
attgatggcacaccagtgagaccttaa
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integrated database retrieval system
