Oreochromis aureus (blue tilapia): 116330286
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Entry
116330286 CDS
T07295
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03013
Nucleocytoplasmic transport
oau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116330286
03015 mRNA surveillance pathway
116330286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116330286
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116330286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_3
RRM_occluded
Nup35_RRM_2
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
116330286
NCBI-ProteinID:
XP_031608410
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All DBs
Position
LG8:complement(24994825..25001572)
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AA seq
276 aa
AA seq
DB search
MAPSPTKRKDDDKSKQRTKDKSGATKEGADKSRGRDKNRTRRSASSRSSRSSSSSSSSSS
GSSSGSSSGSSSSASSHSGSSSSRSSSSSSSSSSPSPSRQRHNNRRRSRSKSKSPKKEGR
DRRRRSPTPKPTKVFLGRLTRNVIKEHIQEIFSTYGKIKMIEMPMNRMHPHLSKGYAYVE
YETSEEAEKALKHMDGGQIDGQEITVTAVLTPTVRPPPRRLSPPRRMPPPPPMWRRTPPR
MRRRSRSPRRRSPVRRRSRSPGRRRHRSRSSSNSSR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttctccaacaaaaaggaaggatgacgacaagagcaaacagcgcaccaaggac
aagtcaggagccactaaagagggagctgacaaaagccggggccgagacaagaaccgcacc
cgacgcagcgcttctagcaggagcagcaggtcgagctccagctccagcagcagcagctca
ggttccagctctggctcctccagcggctcaagctcctccgcctccagccactctggctcc
tccagctcccgctcttcttcctcctcgtcttcatcatcctcaccaagccccagccgccaa
cggcacaacaacagacgacgctcgcgctcaaagtcaaaatcaccaaagaaggaaggcagg
gatcgacgacgcaggagtcccacacccaaaccgaccaaggtcttcctgggtcggctgacc
agaaacgtcatcaaggagcacatccaggagattttctccacatatggcaagatcaagatg
attgaaatgcccatgaaccgcatgcaccctcatctgtccaaggggtacgcctatgtggag
tacgagacctccgaagaggcagagaaggctctgaagcacatggatggaggtcagattgac
ggtcaggaaatcactgtcacagctgtgctgactcccacagtgcgcccccctcctcgcagg
ctttcccctccccggaggatgcctcctccgcccccaatgtggcgccgcactccacctcgt
atgaggagaaggtctcggtctccacgccgacggtctccagtgaggcgcaggtctcgatcg
cctggccgccgccgccaccggtcgcgatcaagttccaactcctcgcgctag
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