Oreochromis aureus (blue tilapia): 116330327
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Entry
116330327 CDS
T07295
Name
(RefSeq) clathrin heavy chain 1 isoform X2
KO
K04646
clathrin heavy chain
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04142
Lysosome
oau04144
Endocytosis
oau05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116330327
04142 Lysosome
116330327
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116330327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116330327
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oau04147
]
116330327
Membrane trafficking [BR:
oau04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116330327
Exosome [BR:
oau04147
]
Exosomal proteins
Proteins found in most exosomes
116330327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
116330327
NCBI-ProteinID:
XP_031608461
Ensembl:
ENSOABG00000023029
LinkDB
All DBs
Position
LG14:25827973..25852644
Genome browser
AA seq
1677 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASVL
LETNHYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPADAWKESQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFINEEDYAALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLKE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLTKVDKLEASESLR
KQEEQATESQPIVYGTPQLMLTAGPNVPVPPQQPYGYGYTAAPGYGQPPQTAFGYGM
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctatccgcttccaggagcacctgcagctccagaatttggggatc
aacccagccaacattggatttagcacgcttacaatggagtctgacaagttcatctgtgta
cgagagaaggttggtgaacaggctcaggttgtcatcattgatatggctgatcccaacaac
cccatccgccgccccatctctgccgacagcgccatcatgaaccctgccagcaaagttatt
gcccttaaagctgcaaagaccctgcagatctttaacattgagatgaagagcaagatgaag
gctcacacgatgacggatgacgtgaccttctggaagtggatctccctcaacactgtcgcc
ctggtcacagacaacgcggtctaccattggagcatggagggcgactctcagccaatcaaa
gtgttcgaccgccactccagcctggcaggctgccagatcatcaactaccgcactgacgcc
aaacagaagtggttgctgctcattggcatttctgcacagcaaaaccgtgtcgttggagcc
atgcagttgtactcggtggacagaaaggtttctcagcctattgaaggacatgctgctgga
tttgcacagttcaagatggagggcaacacagaggaatcgactctgttctgcttcgccgtg
cggggacaggcgggaggaaaactccatattattgaagtagggactccaccaactgggaac
cagccatttccaaagaaagccgtggatgttttctttcctccagaagcccagaatgacttc
cctgtggccatgcagatcagttccaagcaagatgtagtctttctcatcaccaaatatggc
tacatccacctgtatgacttggaaactggaacctgtatctacatgaacagaatcagcgga
gagaccatttttgtcactgccccccatgagcctactgctggaatcattggagtcaacagg
aaaggacaggtgttgtcggtatgcgtggaggaggaaaacatcattccatacatcaccaat
gtgctccagaacccagaccttgcgctccgaatggctgtacgcaacaacctcgctggtgct
gaggagctgtttgctcgcaagttcaacaccctctttgcagcaggaaattactcagaagct
gccaaggtggcagcgaatgcacccaagggtatcctgcgaaccccagacaccatccgtagg
ttccaaagtgttcccgcccaaccaggccagacgtctcccttgcttcagtactttggcatc
ttgctggatcaaggccaacttaataagtttgagtctctggagctctgcaggcctgtcctt
cagcagggccgaaagcagctactggagaaatggctaaaagaggataagctggaatgttct
gaggagctcggagacttggtgaagtctgtagatccaactctcgccctcagtgtctacctc
agagccaatgttcccaataaggtcattcagtgctttgcagagactggccaattccagaag
attgtcctctatgccaagaaggtgggctacactccagactggatctttttgctaaggaac
gtaatgcggatcagtccagagcaaggtcttcagttctctcagatgctggttcaggatgaa
gagccacttgctgacattacacagattgttgacgtattcatggagtacaacctgatccag
cagtgcacgtccttcctactagatgccctgaagaacaacagacccatggagggaccattg
cagacgcgcctgctagaaatgaatttggtccatgcaccacaggttgcagatgccattctg
ggtaaccagatgttcacccactatgatcgcgctcacgtggcacaactgtgtgagaaagca
ggcctcctgcagagggcgctggagcattacactgacttgtatgatattaaacgagcagtg
gtgcacacacaccttctcaacccagagtggttggtgaatttctttggctccctgtctgtg
gaggattccttggagtgtctgagggccatgttatctgccaacatccggcagaacctgcag
atctgtgtgcaggtcgcctccaaataccacgagcagctcactactcaatccctcactgaa
ctgtttgagtcattcaagagctttgagggtttgttctatttcttgggctccattgtgaac
ttcagccaggatcctgaagttcacttcaaatacattcaggccgcgtgcaaaacaggccaa
atcaaagaggtggagagaatctgcagagaaagcaattgctacgaccccgaacgtgtgaag
aacttcctcaaggaagccaagcttaccgaccagctgccgttaatcatcgtgtgtgaccgc
tttgatttcgtccacgatctggtcctgtacctgtaccgcaacagcctacagaaatacatt
gagatctatgtgcagaaggtgaacccgagccgtctgccagtagtcattggtggattattg
gatgtggactgtgccgaagatgtaattaagaacctgatcatggtggtgagaggacagttc
tccacagatgaactggtcgctgaagtggagaaaagaaatcgcctgaagttgttgctgcct
tggttggaggctcgtattcatgaaggttgtgaggagcctgcaacccacaacgccttggcc
aagatctacatcgacagcaacaacaatcccgagcgtttcttaagggagaacccttactat
gatagccgtgtggtgggcaagtactgtgaaaagagagacccccacctggcctgcgtggct
tatgaaagaggacagtgtgaccaggaactcattcacgtgtgcaatgagaactcactgttc
aagagtctgtcccgctaccttgtacgccgcaagaacccagagctgtgggcaagtgtgctg
ttggagaccaaccattacagaagaccactcattgaccaggtcgtccagacagccttatca
gagacccaggatccagaggaggtgtcagtcacagtcaaggccttcatgaccgccgacctt
cctaacgagctcatcgagcttctggaaaagattgtgctggataattctgtctttagcgag
cacagaaaccttcagaatctcctcattctgactgccattaaagctgatcggacacgcgtc
atggagtacattaaccgtctggacaactacgacgccccagacattgcaaacattgccatc
agcaatgagctgtttgaggaggcctttgctatatttagaaaatttgatgtcaacacttct
gctgtgcaggtcctgatcgaacacatcggcaacctggacagagcttatgaattcgctgaa
cgctgcaatgagcccccagtttggagtcagctggcaaaggcacagcttcagaagggcttg
gtgaaagaagccatcgactcctacattaaggctgatgatccctcggcctacatggaggtg
ggacaagctgcagcccaaagcggaaactgggaggacctggtgaagttcctgcagatggct
cgaaagaaagcccgcgaatcatatgttgagacagagttgatcttcgccctggccaagacc
aaccgcttggccgagctggaagagttcatcaacggacccaataatgctcacattcagcaa
gtcggtgatcgttgctatgacgacaagatgtacgaggcagccaaactgctttacaataat
gtgtcaaactttggccgtctggcctccactctggttcacctgggagaataccaggcagct
gtggacggtgcccgcaaggctaacagcacccgcacctggaaggaggtgtgttttgcttgt
gtagatgggaaggagttccgtcttgcccagatgtgtggcctgcatattgttgtccacgct
gatgaactggaggagctcatcaactactaccaggaccgtggttacttcgaggagctgatc
accatgctagaggctgcccttgggttggagcgtgctcacatgggcatgttcactgagctg
gctatcctctactccaaattcaaaccccagaagatgagggaacacctggagctcttctgg
tcccgtgttaacattccaaaggttctcagggcagccgagcaggcccacctctggggagaa
cttgtgttcctctatgacaagtatgaggaatatgacaatgccatcatcactatgatgaat
cacccagctgacgcctggaaggaaagccagttcaaagacattgtcactaaggtggctaac
gttgagctgtactacaaggccgtccagttttatctcgagtttaaaccactgctgctgaat
gaccttcttattgtcctctctccaagactggatcacacacgtgctgtcaacttcttcagc
aaggtgaaacagctgcctctggttaaaccttacctaaggtctgtccagaatcacaacaac
aagtcggtgaatgaagcacttaacaacctcttcatcaatgaggaagactatgcggcgctg
cgcacttccatcgatgcttacgacaacttcgacaacatctcgctcgcccagagcctggag
aagcacgagctgattgaattcaggaggatcgcagcctatctttttaaaggcaacaaccgc
tggaaacagagtgtcgagctctgcaagaaggacaagctctacaaggatgccatgcagtac
gcatcagagtccaaagacaccgagctggcagaagagctcctggcttggttcttgaaggaa
gacaagaaagagtgttttgctgcctgcctattcacctgctatgacctgctgcggcccgac
gtagtactggagactgcctggcgacacaacatcatggacttctccatgccgtacttcatc
caggtcatgagggagtatctcactaaggtggacaaactcgaagcctccgagtctctgagg
aaacaggaagagcaggctacagagtctcaacccattgtttacggcacaccccagcttatg
ctcacagcagggcccaacgtgcccgtgcctcctcagcagccctacggctacggctacaca
gcagcacccggctacggccagccgccacagaccgccttcggttacggcatgtga
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integrated database retrieval system
