Oreochromis aureus (blue tilapia): 116330688
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Entry
116330688 CDS
T07295
Name
(RefSeq) LIM domain-binding protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116330688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oau04990
]
116330688
Domain-containing proteins not elsewhere classified [BR:
oau04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
116330688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116330688
NCBI-ProteinID:
XP_031608961
Ensembl:
ENSOABG00000020541
LinkDB
All DBs
Position
LG13:complement(34266603..34315809)
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AA seq
648 aa
AA seq
DB search
MSTYTVSLPGPGPWGFRLQGGKDFNMPLTISRISPGSKAAQGNLMQGDVIVAIDGVSTEG
MTHLEAQNKIKMANYNLALTMSKSKRPIPMAAPRMDATIPIFPHQQVFPPAAPPAGFNPS
VLKQTALSTSKPIEVKGPGGKATIIHAQYNTPISMYSQDSIMDAIAGQTQTKGHDAGSVP
VMDRLVDSASPVYQAVRSTEKDPALSEWSSRSTNVQSKSFRVLAHMTGTESSLTEEEAAA
VKRSSLKRQPPAGFGLQHRAAVTSQYGAPPTMQQAPQVPPPQQYQPMPQQYQHAPMQQAP
QALPPQQYQPMPQQYQQPPTQQAPSTQQSSIQIPVGSAPPKVISTACIYPSQPAPPMAPA
AVPPQPRPPAAAPAPLLAAPASSNRPPWVTDSNFADKFDPGKTTSSTIKVQPLPQAAPPP
PAYIPNPSPAGHAAPSPAPITPSPGPAPFPPVARGVAQRAERFAASSRTPLCGACNSVIR
GPFLVALGRSWHPEEFNCHYCHMSLADVSFVEEQNNVYCENCYEEFFAPTCARCNTKIMG
EVMHALRQTWHTTCFVCAACGKAFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAG
DKFIEALGHTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctacactgtgtcgctgcccggccccgggccctggggcttcaggctgcagggg
ggcaaggacttcaacatgccgctaaccatctccaggatctctccgggcagcaaggcggca
cagggtaacctgatgcagggtgatgtcattgtcgccatagatggtgtcagcaccgagggg
atgactcacctcgaggcccagaacaaaatcaagatggcaaactacaacctggctctcacc
atgtccaagtcgaagcgtccgattccaatggcggcaccgagaatggatgctacaattccc
atcttccctcaccagcaggttttcccccccgctgctccacccgccggcttcaaccccagc
gtgctgaagcagaccgccctctccaccagcaagcccattgaagtaaaaggccccggtggt
aaggccaccatcatccatgcccagtacaacacgcccatcagtatgtattcacaggactcc
atcatggacgccatcgcgggacaaacacagaccaagggccacgacgctggttctgtccca
gtcatggaccgcctcgtggacagcgcctcgccagtctatcaggccgtccggagcacagag
aaggacccagcgctgagtgaatggagcagccgcagcaccaacgtgcagtccaagtccttt
cgggtcctggcccacatgactggcaccgagtcctcgctcactgaagaggaggcggcggct
gtgaagaggagcagcctgaagcgacagcctcccgctggtttcggcctccagcacagagct
gcagtcaccagccagtatggtgcacctcctaccatgcagcaggcgccacaagttccaccc
ccacaacagtaccaaccaatgccacagcaataccaacacgcacctatgcagcaagctcca
caagctctgcccccacaacagtatcaaccaatgccacagcagtaccaacaaccacccaca
cagcaggctccatccactcaacagagctcaattcagatccctgttggctccgccccccct
aaggtgatcagtactgcctgcatctacccttcacagccagcaccacctatggctccagct
gcagtcccaccgcagccccgacctccagccgccgccccggccccgcttctggctgctccc
gcatcctccaacagacccccgtgggtgaccgactcaaacttcgctgataagttcgacccc
ggcaagaccacctccagcaccatcaaggtgcagccactgccccaggccgcccctccccca
ccagcgtacatccctaacccctcccctgctgggcatgcagctcccagccccgcccccatc
acccccagccctggccccgccccctttccacctgtggccagaggcgtggcccaaagagcg
gagaggtttgcagccagcagtcgcacgcctctgtgcggggcctgcaacagcgtcatcagg
ggtcccttcctggtggcccttggccggtcctggcaccccgaggagtttaactgtcactac
tgccacatgtctctggccgacgtcagcttcgtggaggaacagaacaacgtgtactgtgag
aactgctacgaggagtttttcgccccaacctgcgctcgctgcaacaccaagatcatgggg
gaagtgatgcacgccttacggcagacatggcacaccacctgctttgtgtgcgcagcctgc
gggaaagccttcggaaacagcctcttccacatggaggatggagagccgtactgcgagaaa
gattacatcgcgctcttcagcactaagtgtcatggctgtgacttcccagtggaagctggc
gataagttcatcgaggctctgggtcacacctggcacgatacctgctttgtgtgtgcggtc
tgccacgtgaacctcgagggtcagcccttctactcaaagaaagataaacctctgtgcaag
aagcacgctcacgccatcaacgtgtaa
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