Oreochromis aureus (blue tilapia): 116331026
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Entry
116331026 CDS
T07295
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116331026 (ctcf)
03036 Chromosome and associated proteins [BR:
oau03036
]
116331026 (ctcf)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116331026 (ctcf)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116331026 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_7th_ZNF462
Zf-C2H2_ZNF451_C
Zf-C2H2_ZNF451
zf-met
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
116331026
NCBI-ProteinID:
XP_031609400
Ensembl:
ENSOABG00000010394
LinkDB
All DBs
Position
LG7:26314011..26330779
Genome browser
AA seq
856 aa
AA seq
DB search
MFKSLSLLFQFLPSMDGRPTDGVGVVDVPTKEFPSIQAVHSQDAMVADLLQQAAEAGGVV
EGQAGVVVEQGHGEGMAAATQSQQQLMEGVGVEGGTGVEMMVMDSLDPTLLQMKTEVIDA
AVGGSSAAVGVVGGVPGSAHQATVTTVDQTQIITLQVVNMEEQAALGLGELQLVQVPVSA
TTVEALQQGNFVDTTAMPKDGDPVICHTLPLPEGFQVVKVGANGEVETVEQEEEGAETQP
DEEEDEEVGNQLLEEGEEEPVQPPNDDPNWAKDPDYQPPSGVVKKIKKGKKSRLRYAEGD
KDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSFIETGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDMCDYCCRQERHMVMHRRTHT
GEKPYACSQCEKTFRQKQLLDMHFKRYHDPNFIPATFVCPKCNKTFTRRNTMARHAENCS
GEVEDAENGATIPKKGRRGRKRKMRSRRDDDDDSDEDHAEQDDDEEEGEGEEESSLLQEE
EDPESMELDQAPAAIPVPAPDEPPVKRKRGRPPKNAPKPPTPSKSVRVATKTTASAAAII
QVEDESTGAVENIIVKKEEGDASAATPLDQGVALTVEGVGLDEGVETVELPVNEETAAAS
ANGDLTPEMILSMMDR
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagtcattatccttgctattccagttcctacccagcatggacgggaggccaaca
gatggtgtaggggttgtggatgtccccaccaaagagtttccgtccatccaagctgttcac
agccaggatgccatggtggcggatctccttcagcaagcagccgaggctgggggtgtggtg
gagggacaagctggagttgtcgtagaacaaggtcacggggaaggaatggcagcagccact
caatcccagcaacagctaatggaaggagttggtgtggaaggtggcacaggagttgagatg
atggttatggactcattggatcccaccctgttgcagatgaagactgaggtaatagatgct
gcagtgggagggtcatcagctgcggtgggtgtggtcggaggggtaccaggtagtgctcac
caagctactgtgacaactgtggatcagacgcagataatcaccctacaggtggtgaacatg
gaggagcaagccgcgttgggcttgggggagctacagctggttcaggtgcctgtttcagcc
actactgtggaggcgcttcaacagggcaattttgtagacactactgcaatgcctaaagat
ggagacccagttatctgtcacacccttccactgcctgaaggctttcaggtagttaaggtt
ggtgctaatggtgaggtggagactgtggaacaggaggaggaaggagcagaaacgcaacct
gatgaggaggaagatgaagaggtgggtaaccagctgctggaagagggggaagaggagcct
gttcagcctccaaatgacgacccaaactgggctaaggacccagactatcagccaccatct
ggagttgttaagaagatcaaaaagggtaaaaagagtcgtctgcgttatgctgagggagac
aaggatatggatgtcagtgtctatgactttgaggaagaacagcaggagggccttctgtct
gaagtcaatgctgagaaagtggttggcaacatgaaaccacctaaacctaccaagataaag
aagaagggagtgaagaagacatttcagtgtgagctgtgtagctacacgtgccctcgacgc
tccaacttggacaggcacatgaagagccacacagatgagagacctcacaaatgtcatttg
tgtggaagagctttcaggacagtcactttgctaagaaaccatctcaacactcacaccgga
actcgtccacacaagtgcacagactgtgatatggctttcgtgactagtggagagctggtt
cgccatcgtcgctacaagcacacacacgagaaacccttcaaatgctccatgtgtgactat
gccagtgtggaggtgagcaaattaaagcgtcacattcgttcccacaccggcgagcgtccc
ttccagtgcagtctttgcagttacgctagcagagacacttacaagctgaagagacacatg
aggacacactcaggagagaaaccctatgagtgctacatctgccatgcccgattcacccag
agtggaaccatgaagatgcacattctacagaagcacactgaaaatgtggccaaattccac
tgtccacactgtgacactgtcattgcacgcaagagtgacttgggtgtccatcttcgtaag
caacactcattcattgagactggaaagaaatgtcgttactgtgacgcagtttttcatgag
cgctacgctctgatccagcaccagaagtcacataagaatgagaagaggttcaaatgtgac
atgtgtgactactgctgtcgccaggagcgtcacatggtcatgcatcgccgaacgcacacc
ggagagaaaccatatgcctgcagccagtgtgaaaagaccttcagacagaagcagctcctg
gacatgcacttcaaacgctaccatgaccccaactttatccctgccacctttgtttgtccc
aagtgtaacaagaccttcacccgaaggaacaccatggctcgccatgctgagaactgcagc
ggtgaggtggaggatgccgagaatggagctacaatcccaaagaaaggacgaagaggaaga
aagaggaagatgaggagcaggagggatgatgatgatgacagtgatgaggatcatgctgag
caggatgatgatgaggaagagggtgagggtgaggaagagtcatcacttctacaggaagag
gaggacccagaaagcatggaactggaccaggctccagccgccattcctgtaccagccccc
gatgagccaccagtcaagaggaaacgaggccggccccccaaaaatgcccccaagcctcca
acacccagcaagtccgttagagttgctaccaaaacaactgcttctgctgctgccatcatt
caggtggaggatgagagcactggggcagtggagaacatcatagtgaagaaggaggaaggc
gatgcctctgcagcgactcctctggatcagggagtggccctcactgtggagggggtgggg
cttgatgaaggggtagagactgttgagcttcctgtgaacgaagaaacagcggcagcttca
gccaacggagatttgacaccagagatgatccttagcatgatggaccggtga
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