Oreochromis aureus (blue tilapia): 116331096
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Entry
116331096 CDS
T07295
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04010
MAPK signaling pathway
oau04020
Calcium signaling pathway
oau04144
Endocytosis
oau04510
Focal adhesion
oau04540
Gap junction
oau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116331096 (pdgfra)
04020 Calcium signaling pathway
116331096 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116331096 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116331096 (pdgfra)
04540 Gap junction
116331096 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116331096 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oau01001
]
116331096 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oau04090
]
116331096 (pdgfra)
Enzymes [BR:
oau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116331096 (pdgfra)
Protein kinases [BR:
oau01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116331096 (pdgfra)
CD molecules [BR:
oau04090
]
Proteins
116331096 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
C1-set
C2-set_2
Receptor_2B4
Ig_ADGRF3
Motif
Other DBs
NCBI-GeneID:
116331096
NCBI-ProteinID:
XP_031609510
Ensembl:
ENSOABG00000018454
LinkDB
All DBs
Position
LG23:37992290..38009300
Genome browser
AA seq
1467 aa
AA seq
DB search
MDWLKTFVLFGGSLVVLVSVTSGLHPPTILSDQEEFVLQPNSLFNISCTAKTHVVWEEPL
QKNALVYPGYYTSTLFIYNATVENTGYYTCKYEDPDEQLEADEAEIYIFVPDPHAPFVPE
LPTDLVVSADNYGVNIPCRVSHWDSYVILRKVPSGEALHALYNSKEGFFSNNLTPGQYQC
ETTLNGQIVRSSIYTVISNDPMEGKDFEDSDMEVIASEETLRAGQPFNITCIVPSGLDFQ
QQWLHPKKQAKDAVLMKETFPERVAYILSIPRAASQDSGTYECSVTDKSGEVRVKKVAVT
VFEENSFVAMDHSGILSTEFVHSFEETEFTIIIDAYPAPKVTWMKDGKDLQVNYYLFTTT
SHQGGNRYLSTLKFRHPLEKDNGNYTIIAQSGSHTAQFSFNLHMKAPTAGMIPSSSVPLL
LPKLDEMVVTLHTPFTLTCHGQENLGWETPIDVSEQTQEDPNGLFISTITVDSATASHTG
YYTCFYSRTFVEDTAEFSRIYIYVPDPDVPFLESLIPFGYHVLSGYDEMEIQCRVSDPNA
NVTLINSDTQQPVPSIYDSKRGALGIFTAGTYVCKAVINGHEFYSEEYIVHGSTDELDVE
LTAKKTALLVGDTITVTCVARGSEILEDHWKYPGKLANRGTKTVRENKRTQEIFYTLTIP
QASTKDSGIYSCSITDILSNSGQTKQLAIQVYASEFLSVKPEFREYESAALDEVREFKAV
VNSFPSVHVSWFKDGYPLSDVTAEISTSLQQTSEISYMSVLTLIRAKEEDSGNYTMRVEN
GNQSRDISLILEVKVPAVIVDLMDVHHGSAQGQSVVCITRGQPTPMVEWFVCKNIKHCAN
DSSSWVPIPANSTEITLDSHIDEDNNLESQVMFGHLESTMAVRCLARNEMAVVSREVKLV
SNGPHPELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESVSPDGHEYIYVDP
MQLPYDSRWEFPRDRLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSE
KQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRENFLSLN
PEKNKKELDIFGINPADESSRSYVILSFESKGDYMDMKQADSTQYVPMLEMSNASKYSDI
QRSNYDHPPSQKGSSEGEMEIMLSDDVNEGLTTTDLLSFTYQVAKGMEFLASKNCVHRDL
AARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVW
SYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMSKPEHAPHDVYEMMMKCWNSEPEK
RPSFLGLSETVASLLPSSYKRQYERVNHEFLKSDHPAVTRVCMENEDYIGIAYKNQGKLK
DRESGFDEQRLSSDSGYIIPLPDLDPISDEEYGKRNRHSSQTSEESAIETGSSSSTFAKR
EGETLEDITLLDEMCLDCSDLVEDSFL
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggattggctgaagacgtttgtcctctttgggggcagtttggtggttttggtttcagtt
acctctggactgcatccaccaaccatcttgtctgaccaggaggagtttgtcctacagcct
aattccctcttcaatataagctgcaccgctaaaacacacgtggtttgggaggaaccgctg
cagaaaaacgccctggtttatccggggtattacacttcaacactcttcatatacaacgca
acggtagaaaacacaggttattacacgtgcaaatatgaagacccggatgaacaactggaa
gctgatgaagcagaaatttatatttttgtcccagatccacatgctccatttgtccccgag
ttacccacagacctggttgtctccgcggacaattatggagtcaacatcccatgtcgtgtg
tctcactgggactcctacgtcatcctgagaaaagtccccagtggagaggctttgcatgcc
ttatacaacagcaaagaagggttcttctcaaacaacctaactcccgggcagtaccagtgt
gaaaccactctgaatggccagatagtccgaagttctatttacactgtaatatctaatgac
cctatggaggggaaggattttgaggattctgacatggaggtaatagccagtgaagagacg
ttgcgagcagggcagcctttcaacatcacatgcatcgttccttctggcctggactttcaa
cagcagtggctccatcctaaaaaacaggctaaggatgcagttttgatgaaggaaactttt
cctgagcgggtcgcctacatcctcagtatcccacgagccgcctcacaggacagtggcacc
tatgagtgctctgttacagacaaaagcggtgaggtcagagtcaaaaaggtggctgtgacc
gtctttgaggagaattcctttgtggccatggaccacagtgggattttatccacagaattt
gtccacagttttgaggagacagagtttactatcattattgatgcatacccagcccccaaa
gtgacatggatgaaagatggcaaagacttacaagtgaactactacctctttactactact
agccaccagggaggaaatcggtatctgagcactttgaaattcaggcatcctctggaaaaa
gacaatggaaattataccataattgctcaaagtggctctcacactgctcagttctccttt
aacctgcacatgaaagctcccactgcagggatgatcccatcatcttcagtccctctgctg
ctgccaaagctggacgagatggtagttactctccacacccctttcaccttgacctgtcat
ggacaggaaaacctgggctgggagacgccaatcgatgtatctgagcaaacgcaggaggac
cccaacggcttgtttatcagcaccatcacagtggatagtgccacagcaagccacactggc
tactacacgtgcttttatagtagaactttcgttgaggatacagcagaatttagtagaatc
tacatttatgttccagaccccgatgtcccctttctggaatcactgataccttttggctac
cacgtcctgtctggatacgacgagatggagatccagtgtcgagtgtctgatccaaatgct
aacgtgactctgattaacagtgacacccagcagcctgtgcctagtatttatgacagcaag
aggggcgctttggggatattcactgctggaacctatgtctgcaaggctgtcataaatgga
cacgaattctacagcgaggaatacatcgtccatggctcgacagatgagctggatgttgag
ttgacagcgaaaaagactgctctgctggtgggcgacacaataactgtcacctgtgtggct
cggggatctgagattctggaagatcactggaagtatcctggcaaactggcaaatcgtggt
acaaaaacagtgcgagaaaataagagaactcaggagatcttttataccctgaccatccca
caagcttcaaccaaagacagcggcatctactcttgctccatcactgacatactgagtaac
agtggccagacgaaacaactagctattcaagtttatgcaagtgagttcttgtccgtcaag
ccagagttcagagaatacgaatctgcagcgctggatgaagtccgggagttcaaggctgtt
gtcaactccttcccaagtgttcatgtcagctggtttaaagatggctacccactcagcgat
gtgactgcagagatctccaccagcctccagcagaccagtgaaatcagctacatgagtgtt
ctcaccctgatccgagccaaggaggaggacagcgggaactacaccatgcgggtggagaac
ggaaaccaaagtcgtgatatcagtttaatccttgaagtcaaagtgcctgcagtcattgtt
gatctgatggacgtccaccatggctcagctcaaggccagtctgtggtttgcattaccaga
gggcagccgacacccatggtggagtggtttgtctgcaagaatatcaaacattgcgctaat
gattcgtcttcgtgggtgcccatccctgccaactccactgagatcacattggactcacac
attgatgaagacaataacctggagagtcaggtcatgtttggtcatctggaaagcacaatg
gcagtgcgctgcctggccaggaacgaaatggctgttgtcagcagggaggtcaaactggtg
tccaatggccctcaccctgagctgactgtagctgctgctgtgctggtgctcctggtcatt
gtcatcatctcactcattgtcttggttgttatctggaaacagaaaccacgatatgaaatc
cgctggagggtcatagaatctgtgagcccagacggtcatgagtacatctatgtggatccc
atgcagcttccctatgactcgagatgggagtttccccgtgacagacttgtgcttggtcgt
atcttgggctctggagcctttgggaaggtggtagagggcaccgcctatggactcagccgc
tcgcaacctgtcatgaaggtggcagtgaaaatgctgaaacccacagcacgctccagtgag
aaacaggccctgatgtctgaactcaagatcatgactcatcttggaccccatctcaacatt
gttaacctcctgggagcatgcaccaagtcaggccctatctacattatcactgagtactgc
ttctatggggacctggttaactatctgcacaagaacagggagaacttcctcagtctgaac
cccgagaagaacaagaaggagctggacatctttggaatcaaccctgcagatgaaagcagc
aggagttatgtgatcctgtcatttgaaagcaaaggggactacatggatatgaagcaggct
gacagcactcagtatgtgcccatgctggagatgagcaatgcctccaagtactcagatatc
cagcggtctaactatgaccatccaccctcacagaaaggctcgagtgaaggtgaaatggaa
atcatgctgtcagacgacgtaaatgaaggcctcaccaccactgacctgctcagctttacc
taccaggtggccaaaggcatggagtttcttgcctccaaaaattgtgtacatcgagacctt
gcagccaggaatgtccttctctctcagggcaagatagtgaagatctgtgactttggactg
gctagagacatcatgcatgacaacaactatgtgtccaaagggagcacttttctcccggtg
aagtggatggcaccagagagtatttttgataacttgtacaccactctgagcgacgtctgg
tcttacggcatcctcctctgggagatattctccctgggtggcaccccgtacccagggatg
gtggtggactcgagtttctacaacaagatcaagagtggatacaggatgtcaaaaccagag
cacgcacctcatgatgtgtatgagatgatgatgaagtgctggaacagtgagccagagaag
aggccatctttcctgggtctgagtgaaacagtagcttcgttgttaccctccagctataag
aggcaatacgaaagagtaaaccacgagttcctgaagagcgaccaccctgctgttactcgg
gtatgcatggaaaatgaggactacattgggatcgcctacaaaaaccaggggaagctgaag
gacagagaaagtggcttcgatgaacagcggttaagctctgacagtggctacatcattccc
cttcctgacctggaccctatatctgacgaagaatatggaaagaggaacagacacagctct
caaacatctgaagagagcgccattgagacaggctccagcagctccacctttgctaagcgc
gagggtgagactctggaggacatcacgctgctggatgagatgtgtctagactgtagtgac
ctggtggaagacagctttctgtga
DBGET
integrated database retrieval system
