Oreochromis aureus (blue tilapia): 116331123
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Entry
116331123 CDS
T07295
Symbol
sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oau01009
]
116331123 (sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116331123 (sh3rf1)
Enzymes [BR:
oau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116331123 (sh3rf1)
Protein phosphatases and associated proteins [BR:
oau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116331123 (sh3rf1)
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116331123 (sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_11
Prok-RING_4
zf-rbx1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
116331123
NCBI-ProteinID:
XP_031609564
Ensembl:
ENSOABG00000015552
LinkDB
All DBs
Position
LG23:37403559..37454821
Genome browser
AA seq
872 aa
AA seq
DB search
MDESVLLDLLECPVCLERLDASAKVLPCQHTFCRRCLQGILGSRGELRCPECRTLVECAV
DELPSNILLVRLLDGIKQRPRRVGPGAAVCTNGTSGAMARAHGSGSRDQGTPGAQPQRAQ
AKSTLVRGVPQLPCAKALYNYDGKEQGDLKFSKGDIIILRRQVDENWYHGEMGGVHGFFP
TNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGD
KIGIFPISYVEFNSAARQLIELDKPSDSSGDSGEGASSGPQTNGAQRAGEKKNSKKRHSF
TSLTMSHKPMLAPPPQRHSMEISGPVLISSSNPTAAARIGEISGGLSCSAPSQVHICTTG
LIVTPPPSSPVTTATVFTFPSETSYTSIPVDALPPPPPPPPQSSVGGAAYSLAAGQRPSP
SISDQSGRQRPTVYVAMFPYTPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVF
PGNYMSPVSRTASGSSQPKVPMSLCTQAGRGVTIVSPSSAPLGAIVSGPDFNKPLTVCPA
AAPASSQPAAVVTTAQTATGQQPKVSLHVTSQMTVNQARNAVRTAACHSQDRPTAAVTPI
QSATPVTYLPHLAVCSQPGSSPAQGCTRVGVAMGCAAASLTPPNVSAASLDSDALRPVPV
LTVPVGPGSNSTLNPTSNNAAPACRLDKDIKQREKKSLLKLLSSNKKKSRPSPPSSPTLE
AEQAAAAGEVLHGAVGPDTSPPSGPASCLEPEPAAAAAAAAASASSSSSSSSSSVPESSH
RKSSPLDGCVPIAPPPRQPCSSLLSQQHDARPIICERYRVVVSYPPQSEAELELKEGDIV
FVHRKREDGWFKGTLQRNGRTGLFPGSFVDII
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtccgtgttgttggatttgctcgagtgccccgtttgtctcgagcggctagat
gcctcggcaaaggttcttccttgtcagcacaccttctgccggcgttgcctccaaggcatc
cttggctcacgcggggagttgcgctgcccagagtgccggacgttggttgagtgtgccgtg
gatgaacttcccagcaacatcctacttgtgcggctcttggatggaatcaagcagaggcca
cggagggttggccctggggcagcagtctgcacaaatggtacatctggagccatggccagg
gcacatggaagtggatcccgggaccagggcaccccgggagcacaaccccagcgagctcag
gctaagagcaccctcgtccggggcgtaccccagctcccgtgtgccaaggcactctacaac
tacgatggcaaggaacaaggagacctcaagttcagcaagggtgacattatcatcctgcgt
cgacaagtggatgagaactggtaccacggtgagatgggtggagtccacggctttttcccc
accaactttgtccaagttattaagccgctgccacagccgccacctcagtgcaaagctctc
tatgactttgagctcaaagataaagaggccgacaaggactgtctgcccttctcaaaggac
gatatcctgactgtgattcgcagagtagatgaaaactgggcagagggaatgctgggagat
aaaattggaattttccccatctcgtatgttgagttcaattcggcagctcgtcagcttata
gagttggacaagccgtccgactccagtggagactccggggaaggggcctcctcagggcct
cagacaaatggtgcccagcgggcaggggagaagaagaacagcaagaaacgccattctttc
acctctctcaccatgtcgcacaaacccatgctagcgcctcccccccagcgccactccatg
gagattagcgggccggtcctcatcagctccagcaaccccacggcagcagctcgaatcgga
gagatcagcgggggcctctcctgcagcgcaccttcacaggtacatatttgcacaactgga
ctaattgtgaccccgcctcctagcagtcctgttactacagcaaccgtcttcacatttccc
tcagagacgagctacacatccatccctgtggatgctctcccaccacccccaccgcctccc
ccccagtcctccgtcggtggagctgcatattcgctggctgctggacagagaccctccccc
agcataagcgaccaaagtgggagacaaagacccacagtctatgtggcaatgtttccctac
actcctcgaaaggaggatgaactggagctgagaaaaggagagatgtttctggtgctggaa
cgctgtcaggatggctggttcaagggcacgtccatgcacacgggcaagattggagtcttt
cctgggaactacatgagccccgtcagcaggacggcgtctgggagctctcagcccaaagtg
cccatgagtctgtgcactcaggcaggcagaggtgtcaccatcgtcagcccctcttcagct
ccccttggagccattgtttcagggcctgattttaacaaaccgctcactgtatgccccgcc
gctgcacctgccagctcccagcctgcagcggtggtcaccacagctcaaacagctacaggc
caacagccaaaagtctcgctgcacgtcacctcccagatgaccgtgaatcaggctcgcaac
gcggtcaggacagctgcatgtcacagtcaggacaggcccacagcagcagtgacaccaata
cagtctgcaacaccggtgacgtatctcccacacctcgcagtgtgctcgcagcccgggtca
agtcctgcacaaggctgcactcgagtaggggtggcaatgggctgcgcagctgcctccttg
accccacccaatgtcagcgctgcatctttggatagtgacgctttgagacctgtacctgtc
ctcactgtgcctgtcggccctgggagcaactccactctcaatcccacgtctaacaatgca
gctcctgcctgcagactggataaagacatcaagcagagagaaaagaaaagtcttctgaag
ctgttgtcctccaataagaagaagtctcgcccttcgcccccctcctctcctacccttgag
gcagagcaggccgctgctgctggagaggtgctacatggcgctgtgggccctgacacctcc
cctccctctggcccagcgagctgcctggagcctgaacctgctgctgctgctgccgctgct
gctgcttctgcctcgtcatcctcttcctcctcctcctcctcagtcccagagtcctcccat
cggaagagcagtccccttgatggatgtgttcctatcgctcctcctccccgccagccctgc
tcctctcttttatctcaacagcatgacgcacgtcccatcatatgtgagaggtacagggtg
gttgtatcatatcctccccagagcgaggcagagctggaacttaaggagggcgacattgtc
tttgttcacaggaagagggaagatggctggttcaaaggcacgctgcagaggaatggcagg
acgggactgttccctggcagctttgtagacatcatttaa
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