Oreochromis aureus (blue tilapia): 116331176
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Entry
116331176 CDS
T07295
Symbol
lama3
Name
(RefSeq) laminin subunit alpha-3 isoform X1
KO
K06240
laminin, alpha 3/5
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04382
Cornified envelope formation
oau04510
Focal adhesion
oau04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116331176 (lama3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116331176 (lama3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116331176 (lama3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_II
EGF_LMN_ATRN
EGF_laminin
Laminin_G_3
Laminin_I
TS_C
DASH_Dad2
Motif
Other DBs
NCBI-GeneID:
116331176
NCBI-ProteinID:
XP_039462667
Ensembl:
ENSOABG00000023008
LinkDB
All DBs
Position
LG23:complement(38504156..38528543)
Genome browser
AA seq
1693 aa
AA seq
DB search
MQWAASWLCIAAPLFLLCFAPSCPSAQKYPKCWHDRRTQIRQKQHSRKTFCDPSFSNQTA
GAVTQKCSSGFYREWAGPNRGQCVPCSCNGLSDECDERTGNCVKCQFDTTGDHCERCKEG
YFGDPVNRTCRACLCPFTENNFALACLDVGSGVVECLCKRGYSGVRCERCAFGYYGNPMV
QGGMCKPCNCKKNGLNPCDSLTGECITSGNSNCGDHCHAECDSCTYTLLVDSEKMDDDLF
WLKQQLQNISHSPVSRSTLNNLEVNISEAKVQMGSHSTAVRLLDPKVEQLEADVAADRYD
LSQLSDENLDIASYLKKTLESANETKLKADDLFKTGALLTTIQDLIKQLTEAKPEDSVSL
SEKDKGRMMEEAQRIMEEMRKRGCTAQRDKAGSEQEKAHKLLELISNDMIAAAEMKQLIL
IQSGDSVMASDSAVRQLGELLLDAEDRVDRARGLNLKSRTALQHLQHLKAQLDKEQSTLH
PVTEMTKDLLKNISDILSILKEVKKEFEKQAVQLDGAKLEHFQQLNNSFIIAEVEAIAQA
EEHAKELKRMATELQQVLHTASNSTSLVSFLGIGAYDSIIKAVEMAEKAAKESKKAADQT
LKDVKKKGLISRSEQLKDNSTHLWRETRDTQSHLKMVSRTVNAHRNRVNKQKKKRRSLRI
ATSSISDKLKKIKRDDTVALIGSVKTAASDANATVSNVKERLRNISEEVGRILTNISVNI
NDMLTDADQAVKSFDKAFPVMSDKLAEVKALGRKMSPHPNMTESIQRIKDIIEETRNFVN
RLPLGTTFNGKSHIELHPPRNLEDIKAFTAVDLLLNRHHKTPSKSDVRRKRHQDEHRDDN
LFVFYLGSKNASGDYIGMAIRNTVLVCVYKLGGVVHEVETSQITLGSVNSSDFNRVIFHR
VYQDAEVNVTQNFTSKEPVSLPPKRNLPNTMTGVFDLDPGSVVFYVGGYPDYFTPPVELR
YPKYRGAIKLSYLNDNPVCLFNFKHAVNMDAKQHTVKIPQDPLCDYYEGRGYRMAFIKDP
DWKKRRLFRFHTNSRETNALLFYIGNNESFFCVFVERGFLVLQGQQADREIRLQSPERVS
LFDTQFAIAIADKFIVLYGPKTVSTDHIQTDYMSYYIGGLPAELRERHNITVAPLRGCVD
HPKADAEIVVFNRTIGVSSGCPLSLLGVRAATLNSALSVDSLFAWDEQPVRFSLGFRSTG
KRGVVLKSGSQGSEPVHNLQLSLDDGFVVFHSFNYTLRSNERYNDGVWHYVSAVGKPSGL
LLSIDNVNVSPAHSDQISMPRGKFKGCIANLYTSRPSILPADLSSLSQTGDIIFGQCSQP
PPPHSTMKRPQTHNLIKTPAGSQCRPQRAYQLYEKDSWVSYNLPQENLNYRPHFSLDINT
KSSKGLILHVAGEGTVPLLALYVANGKIKMSLGQNRIIQHKEKSNDGNWHRVEFSVENST
FHLLVDGIRVTDGRLPNNEGSSLDLRNPVYLGADTKSKNTKGHNIPTDSVISCIREFKMN
DVFVGAADVSHKALPCFDELAEEGAYFGGGHIVLDNYFTVGSHFLLSFKLRPQHLTGLLF
HVQSDKTSLNVFLMENKVGVKVNDGYGAVSVSVTPRKSLCDGKFHEVTVSKNKNAIQLVV
DSVSKEKAGPKSTSYSTALESLHIGGTTNQNGAPVPSPFVGCLRNVKLNGKPVAFEKASR
VVGPVSINRCPAN
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggctgcttcttggctttgcattgcagcaccgttgtttttgctctgctttgct
ccaagttgtccctctgctcagaaatatccaaagtgttggcatgacagacgcactcagatc
cgtcagaagcagcacagcaggaaaacgttctgtgatccttccttcagcaaccagacagca
ggtgctgtcactcagaagtgcagctctggcttctacagagagtgggccggaccgaacagg
ggccagtgtgtgccatgcagctgcaacgggctctccgatgagtgtgatgagcgtacaggg
aactgtgtgaaatgtcagttcgacactacaggagatcactgtgagcgttgcaaggagggt
tattttggagatccagtgaacagaacctgccgtgcctgtctatgtccctttacagagaac
aattttgcattggcctgcctcgatgttggctcaggagtggtggaatgtttgtgtaaacgt
ggttacagtggagtcagatgtgagagatgtgcatttggttattatggcaatcccatggtg
caggggggcatgtgcaagccctgcaactgcaagaagaatggtttgaacccgtgtgattct
ctgaccggagagtgcatcacatctggtaatagtaactgcggggatcactgtcatgcagag
tgtgacagctgtacttacactttgctggtggactcagagaagatggatgatgatctgttt
tggctgaaacagcagctgcagaacatcagtcatagtcctgtatcacgatctactctgaac
aacctggaggttaacatatctgaagcaaaggtacagatggggagtcacagtactgctgtg
agactcctggatccaaaggttgaacagctggaagcagatgtggctgctgacagatatgac
ttgtctcaactgagtgatgagaaccttgacattgcatcatatttgaagaagaccttggag
tctgcaaatgaaacgaagttaaaggcagatgatctatttaaaacaggagctcttctcaca
acaatacaagatctgataaagcagctaactgaggcaaaacctgaagattcagtttctctc
tctgaaaaggacaaaggcaggatgatggaagaagctcagcgcatcatggaggaaatgaga
aagagaggctgcactgctcagagggacaaagcaggcagcgagcaggagaaggcacataaa
ttgttagaactcatcagcaacgacatgatagctgctgcagaaatgaaacaactcatcctg
attcagagtggagactctgtcatggcctcagattctgctgtgagacagttgggcgagctg
ctgttggatgcagaggacagagtcgacagagcaaggggtcttaacctcaagagtcgtact
gccctacagcatctgcagcatcttaaagctcagctggataaagaacaaagcactctccat
cctgtgactgaaatgactaaagatctgctaaagaacatttctgacatcttgtcaatactt
aaggaagttaaaaaagaatttgagaagcaagcagttcagttggatggtgccaagctggaa
cactttcagcagttaaacaacagtttcataatagcagaggtggaagctatagcccaggca
gaggagcatgcaaaggagctcaaaagaatggcgacagaattacaacaagtgcttcataca
gcttctaacagcacttcactggtcagcttcctgggtataggggcctatgacagcatcatt
aaggcagtagaaatggctgagaaggcagcaaaggagtccaaaaaggctgctgatcaaacc
ttaaaggatgtgaagaagaaaggtctgatcagcaggtctgaacagctgaaagataattca
actcatctatggagggaaaccagagacactcaaagtcaccttaaaatggtgtcacgtaca
gtaaacgctcacaggaatcgtgtaaataaacaaaagaaaaaaagaagatcactgagaatc
gccacctcatccatcagtgacaaactcaaaaagatcaaaagagatgacacagtggcactg
atagggtctgtgaaaactgctgcttctgatgctaacgctacagtcagcaatgtgaaagag
agactgagaaatatcagcgaggaagtgggaagaattttaaccaatatcagtgtgaatata
aatgacatgttgacagatgcagaccaggctgtaaaaagcttcgacaaagcattccctgtg
atgagtgacaagctcgcagaagtcaaggctcttggtaggaagatgtcacctcacccaaac
atgacagaaagcatccagagaatcaaggacataatagaggagacaagaaactttgttaat
aggctccctcttggcaccactttcaatggaaagagccacattgagcttcaccctccaaga
aaccttgaggacattaaagcgtttacagctgtcgatcttctcctcaatcgccatcacaaa
accccgtctaagtctgatgtgagacgaaaacgacaccaggatgaacacagagatgacaac
ctgttcgttttctacctgggtagcaagaatgcttctggagactacattggaatggctatc
agaaacactgtgttggtttgtgtctataagttgggtggtgtggttcatgaggtagaaacc
agccaaataacactcggaagcgtgaactcctcagactttaacagagttatcttccacagg
gtttaccaggacgctgaagtgaacgtcacacagaacttcacatcaaaggagcccgtcagt
ctccctcctaaacgtaacctcccaaacacaatgacaggcgtcttcgacttggatccaggc
agtgtcgttttctacgtggggggctatcccgattacttcactcctccagtggagctgcgt
taccccaagtacagaggagccataaaactctcctacctgaatgataatcctgtctgcctt
tttaacttcaaacatgctgtcaatatggatgcaaaacagcacactgtgaagattcctcag
gatccgttgtgtgattattatgaaggaagaggttaccgcatggcgttcataaaggatcct
gactggaaaaagaggcgactgttcagatttcacacaaacagccgagaaacaaatgccttg
ttattctacattggaaacaatgagtcctttttctgtgtgtttgtggagagaggcttcctt
gtgctacaaggtcaacaagctgacagagagattagacttcagagtcctgaaagagtgtct
ctgtttgacacacagtttgcaattgctattgcagacaaattcattgtcctgtatggacca
aaaacggtctccacagatcacattcaaacagactacatgagttattacattgggggtctt
ccagcagagctcagagagagacacaacatcacagttgcaccgctcaggggatgcgtggat
cacccgaaagcagatgctgagattgtcgtgttcaacaggacaataggtgtcagcagtgga
tgtccactctccttactgggtgttcgtgcagctacattgaattcggctctttctgtcgat
tctctgtttgcctgggacgaacagccagtgagattctcgttaggcttcaggagcacaggc
aagcgaggcgttgttctgaagagcggctctcagggctccgaacctgtccacaatctccag
ttgtccctggatgatggctttgtggtttttcatagttttaattataccctgaggtcaaat
gaaaggtataatgatggagtctggcattatgtttctgcagtggggaagccatcagggctg
ctgcttagcattgacaatgtaaatgtgagtccggcacattcagaccaaatcagcatgcca
agaggaaaattcaaaggctgcattgctaatctttatacaagcaggccgagtattttacct
gctgatctaagctcattatcgcaaactggagacattatctttggtcagtgcagtcagcct
cccccaccgcactccacaatgaaaagaccccagacacacaaccttattaagactccagct
ggcagtcaatgtagaccccagagagcataccaactctatgagaaagacagctgggtcagt
tacaaccttccacaagaaaaccttaattataggcctcacttctctcttgacatcaatacc
aaatcgtccaaagggctcatcctccatgtcgcaggagaaggcaccgtccccctcctggct
ctgtacgtggccaacggcaagatcaagatgtcacttggtcaaaacagaatcatccagcac
aaggagaagagcaatgatggcaactggcatagagttgagttcagtgtggagaacagcact
tttcatcttctggttgatgggatccgtgtgactgatggccgcttaccaaacaatgaggga
tcatctttagacctgcgcaaccctgtgtatctgggtgctgatacaaaaagcaaaaacact
aaaggacacaacattcccacagacagtgttatcagctgtataagggaattcaaaatgaat
gatgtatttgttggtgcagctgatgtgagccacaaagccttaccgtgctttgatgagctt
gcagaggaaggggcatactttggtggcggtcacatcgtcttagataactacttcaccgtt
ggctcgcactttttgttgtccttcaagctgcgccctcaacacctcacaggccttctcttc
catgttcaaagtgataagaccagccttaatgtgttcttaatggaaaacaaggtgggcgtc
aaagtaaatgatggttatggagctgttagtgtctcagtaacacctcgtaaaagcctctgt
gatggaaaatttcacgaggttacagtctccaaaaataagaacgcaatccaactagtggtt
gactccgtgtccaaggagaaagcaggccccaaatccacgtcatattcaacggccctggaa
tcacttcacattggggggacaacaaatcaaaatggagcccctgtgccttcaccttttgtg
ggctgcttgcgaaatgtgaagcttaatggaaagccggttgcatttgagaaagcctccagg
gtggtcggtcctgtgagcatcaacagatgccctgcaaactaa
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integrated database retrieval system
