Oreochromis aureus (blue tilapia): 116331436
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Entry
116331436 CDS
T07295
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116331436 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116331436 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oau04147
]
116331436 (vps36)
Membrane trafficking [BR:
oau04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
116331436 (vps36)
Exosome [BR:
oau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116331436 (vps36)
Exosomal proteins of colorectal cancer cells
116331436 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
TssO
MA3
Motif
Other DBs
NCBI-GeneID:
116331436
NCBI-ProteinID:
XP_039474691
Ensembl:
ENSOABG00000007663
LinkDB
All DBs
Position
LG10
Genome browser
AA seq
382 aa
AA seq
DB search
MDRFSWSNGLLEINETLVIQQRGVRLYDGDDKAKMDLGVALLSTHRLIWRDIKNHECCIA
MPLSQIIYFEEQAAGIGKSAKIVIHLHQVPANKEPGPYQYSKYFLTDMALFCCFSLQFYR
RLTEEMTKKRWENTPVSQPIPTGTGSQAGKTRAVGIVGIERKIEEKRKETDKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKAYLLSMGIANPVTRETHGSGTH
YHMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSEKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttttcgtggtcaaatgggcttctagaaataaacgaaactttggtgatccag
cagcgaggtgtcagactgtatgacggtgatgataaggctaagatggatctcggagttgcc
ttgctgagcacccatcgtttaatttggagggatatcaaaaatcatgaatgctgcatcgcc
atgcccctgtcacagatcatctactttgaggagcaggctgcaggaataggaaagagtgca
aaaatagttatccacctgcatcaagtacctgccaacaaggagccaggtccataccaatac
agcaagtactttttaactgacatggctttgttttgttgtttttccttgcagttttacagg
aggctcactgaagagatgaccaagaaaaggtgggagaatacaccagtttcacagcccatc
cccacaggaactggatctcaggcaggaaagacacgtgcagtggggattgttggcattgag
aggaagatcgaggagaagaggaaagaaacagacaaaaacatttctgaggcctttgaggac
ctcagtaagctgatggtgaaggccaaagagatggtggagctctccagatctatagccaac
aagatcaaagacaagcagggagacataacagaagatgagacaatacggtttaaggcatac
ctcttgagcatgggtattgctaaccctgttaccagagaaacgcatggatccggtacacat
tatcacatgcaattggctaagcaactgggagatatgctgcaggcccctctggaggaacgt
ggaggtatgatggctctcacagaggtgtactgtctcgtcaaccgtgctagagggatggag
ctgttatccccagaagatttggtgaatgcgtgcaaaatgtttgagtcattgaagctcccg
ttgaggttgcgtgtgtttgatagcggagtgatggtggtccagctgcagtctcacagtgaa
gaggaaatgatagcctcagcactggacaatgtgtcagagaaaggttccttgactgcagag
gagtttgcaaagctcttgggtctctctgttcttctgtcaaaagagcggttgttgctggct
gagaagatgggacacctttgtagagatgactctgttgagggtttgagattctacccaaac
ctattttga
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