Oreochromis aureus (blue tilapia): 116331549
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Entry
116331549 CDS
T07295
Name
(RefSeq) protocadherin-1-like isoform X1
KO
K16498
protocadherin delta 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116331549
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oau01009
]
116331549
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oau04515
]
116331549
Protein phosphatases and associated proteins [BR:
oau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116331549
Cell adhesion molecules [BR:
oau04515
]
Cadherins
Protocadherins
116331549
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Protocadherin
RhaB_D2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
116331549
NCBI-ProteinID:
XP_039475052
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All DBs
Position
LG11:35804077..35810778
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AA seq
652 aa
AA seq
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MTVLRCEVVLFLATILVSCSSSLTHLNIRVDRGKLLRSSRSVTVSHQQDNAPEFDRSHYE
AELLENSLLGQSVLQVRASHADIAIGEMNYSLHQVSETIQRLLRIDSVTGIIYVKGLVDR
EEESILKLFVVARDRGPSSRIKSSKVLVTINVTDQNDNAPSINIQGIGLVKYQDGVSKIS
EDLPVGTPVALVQVSDRDEGENAVVTCAVDGDVPFQLQPASDQKGKYFLQTTTLLDYESV
KNYSIEIVAMDSGSPALSSTLSLIVQVTDVNDNAPNFSPATIEVDFPENNYRGQKLLDLV
ATDPDSGINGQLVYSIIDRFAKRLFEVDANIGEVRVRTVLDREERERYVFCVAAADMGVP
RKTGTATMIVNVQDQNDNDPVFIPNGYSFTAAENMPPPSRVGAVAVLDADKDENSHLRLF
VEPDNGNFFIQNGTGIILSRISFDREKERFYTFRLKAVDGGDPPRSSYVSVIINVLDEND
NAPYVTKPDNSSYTYLSYFTPAGTYVEVVKAEDTDTGLNAELDYFIVGGNPHGLFQISPY
NGEITLAQEVTGKHSGLHRLVVRVCDKGRPPLCTTALVHVFINGTESNISLIEALVTESL
STPLEKDVAGDLLGSSALVQHSNILYGSLAGIAHVIQTFSSIVSNTAKEDSN
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgcttaggtgtgaagttgtgctgtttctagccaccatcctggtgtcttgcagc
tcttcactcactcacctgaacatcagagtggatcgtgggaagctgctgaggtcgagcagg
tcagtcactgtgagtcaccagcaggacaatgctccagagtttgacagaagtcactacgag
gccgaactcttagaaaacagcctgctgggacagtctgtgctgcaggtcagagccagtcat
gcagacattgccattggagagatgaactacagccttcatcaagtatcagagactatccaa
aggcttctgcgcattgacagtgtgacaggcatcatctatgtgaaaggccttgtggatcga
gaggaagaaagcatcctcaagttgtttgtggtggcccgagatcgtggccccagttccagg
atcaagagttccaaggttctggtgaccataaatgtcacagatcaaaatgacaatgcaccg
agcattaacatccaaggtataggcttagtaaaataccaggatggtgtgtctaagatttct
gaggacctgcctgttggtacaccagtggcactggtccaggtgtcagaccgggatgaaggg
gaaaatgctgtggtaacgtgcgcagttgatggcgatgttccatttcagctccagcctgca
agtgatcagaagggcaaatacttcctgcagacaacgaccctgctggattatgagagcgtt
aaaaattacagtattgaaattgttgcgatggattctggaagcccagctctgtccagcact
ctctccctcattgtccaagttacagatgttaatgataatgcaccgaacttttcccctgca
acgattgaggtggactttccagaaaacaactacagaggacaaaaactactggatcttgtg
gcaacagatccagattctggcataaatggacagcttgtctatagcatcattgatcgtttt
gccaaaaggctctttgaagttgatgccaacattggggaggttcgtgtgagaaccgtgctg
gatcgggaagagagggagcgttatgtgttctgtgtggcagcagcagacatgggtgttcct
aggaaaaccggcactgccacaatgattgtaaatgttcaagatcaaaatgacaatgaccct
gtgtttatacccaacggctacagctttactgctgcagagaacatgcctccacccagtcgt
gttggtgcggttgctgtcttagatgctgataaggatgaaaattcccacctaagactgttt
gtggaaccggacaatggcaattttttcatccaaaatggcacaggaatcatcttgtctaga
atctcctttgaccgtgagaaggaacgtttctacactttccgcctaaaggccgtggatgga
ggtgacccacctcgatcctcctatgtgagcgtgatcatcaatgtcttagatgagaatgat
aacgctccatatgtcaccaaaccagacaactcctcctacacatacctatcatatttcacc
ccagcaggcacgtatgtggaggtagtgaaggctgaggacactgacactgggctcaatgct
gagctggactattttattgtaggtggaaatccacatggtctgtttcaaatatctccctac
aatggggagatcacactggcacaggaagtgaccggcaagcacagtgggctacatcggctg
gtagtgagagtctgtgataaaggcagacctcctctctgcaccactgcactggtccacgtt
tttatcaacggtactgagtccaacatctccctcattgaggcgctggtcacagagagcctc
tccacccctttggaaaaggacgttgccggagatcttttagggagctctgctcttgttcag
catagcaatatcctgtacggcagcctcgcaggtattgctcatgtgattcagacattcagc
tctatagtttctaatacggccaaagaggattccaactag
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