Oreochromis aureus (blue tilapia): 116331642
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Entry
116331642 CDS
T07295
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116331642 (zfr)
Spliceosome [BR:
oau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116331642 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
116331642
NCBI-ProteinID:
XP_031610252
Ensembl:
ENSOABG00000021811
LinkDB
All DBs
Position
LG12:complement(35662024..35720359)
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AA seq
1072 aa
AA seq
DB search
MIPICPVVSFTYVPGRLGEDAKMATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPAAATVAVARPAPVAVAAAATAAAYGGYQPTHAATDYGYPQRQPE
VPPPPPPVTSQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAVAAAQPQPSVADTYYQT
APKPVYSQGVTSYTQSQQTRQVTVIKPAAPSPASSTFSIYPVTSTVQPVAAAASVVPSYS
QSPTYSTNAVTYSGTSYSGYEAAVYSAASSYYQQQQQQKQAVAAVAATAAWTGNTFTKKP
PFQSKQLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSSSNSG
SSGGALARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSMV
TQTSSTTTAAPSKTTLATFSSSSTTSSPCVATSSSPASSSSYLRPINLVSSGVAGVKSPQ
ASSLSAANAASVGKKVNTPKINFVGGNKLQTTVKTEDSRAEAKVEASKPVAASSGSQEPK
SDIPDLSTSSLAVLQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKG
RRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYE
EDMYWRRMEEEQHHWDERRRLPDGGYPQGPPGPPGLLGVRPGIPGLQPQGPVPPRRPDSS
DDRYVMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQDKTKEEDKEKKEPAKDR
ALKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKSLLTSIVEHLPKQLTLVTSEKYEVK
GSVQEAAIILTSCTEPKMQVTITLTSPVIREENGRDGDVTSGMVKDPADVLDRQKCLDAL
AVLRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSAFPGWAMELLVEKAISSASAPLS
PGDALRRVFECISSGILLPGGPGLVDPCEKKPVDTLATLGEQQREDITSSAQFALRLLAF
RQIHKVLGMDPLPQMNPRFSIRNSRKRRRDNSDGTDSFEGEGKKDKKDYDSF
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtagtatccttcacctatgtgcctggccggcttggtgaagat
gccaaaatggctaccggcaattactttggatttacccacggcgctgccgctcagtacagc
cagcagccagcagccggggtagcatacacccatccaaccacagtggccagttacacagtt
catcaagcaccagtggcagcacacactgtggcagcagcttacgcccctgctgcagccaca
gttgcagtagctaggcctgctcctgttgcggtggcagctgctgccactgctgcagcttat
ggaggataccagccgacccatgcggccaccgactatggctaccctcaacggcagcctgaa
gtccctccaccacccccaccagtcacctcacagaactaccaggattcctactcctacgtc
cggtcgacggctccagctgtagcttacgacagtaagcagtattaccaacaacccactgca
acagcggctgttgctgctgcacagccacaacccagtgttgcagatacctactaccagaca
gcccccaaaccagtctacagccagggggtgacatcatacacccagagccagcagactcga
caggtgactgtgataaagccagctgctcccagtccagcctcttcaacgttctccatctac
ccagtgacatctactgtccagcctgtggctgctgcagcctctgttgtcccgtcttactcc
caaagtccaacatacagcactaatgctgttacatactctggaacctcatactctggctat
gaagctgcagtttactcagcagcctccagttactaccagcagcaacagcagcagaagcag
gcagtggcagctgtagctgcaactgcagcatggacagggaacacctttaccaagaaaccc
ccctttcagagtaaacagctgaggcccaaacagccccccaaacctcctcagatacactat
tgtgatgtgtgtaagatcagctgtgctggcccacagacttacaaggagcacctggaaggc
cagaagcacaagaagaaggaagcagcgttgaaggtttctcagagcagcagtaacagtggt
agcagtggaggagcactggcccgcaatgctcagaaccagctccgatgtgaactttgtgat
gtttcgtgtactggtgctgacgcctatgctgcccatatccgtggagccaagcatcaaaag
gttgtaaagctccacaccaaactcggtaagcccattccatccactgagcccagtatggtt
actcagacatcgtccaccactacagctgctccaagcaagaccacactggctactttcagc
agttccagtaccaccagctctccatgtgtggctacctcctcctctcctgcctccagctcc
tcctacctgaggcctattaacctggttagcagtggtgtggcaggtgttaagagcccccaa
gccagcagcctttctgctgccaatgctgcttcagtggggaaaaaagtcaacacccccaag
atcaactttgtaggtgggaacaaattacagaccacagtgaagacggaagattccagggca
gaggccaaggtcgaggcctctaagcctgtcgcagcctcttcagggtcccaggaacccaag
agtgacattccagatctttccacatcatcccttgctgtactgcagagtgatgttcagcct
gttggccatgactatgttgaagaagtccgcaatgatgaaggcaaagtcattcgcttccat
tgcaagttgtgtgaatgtagtttcaatgatccaaatgcaaaggagatgcatctaaaaggt
cgccggcatcgcctgcagtacaagaaaaaggtaaacccagacctccaagtagaagtcaaa
cccagcattcgagccagaaagattcaggaagagaagatgagaaagcagatgcagaaagaa
gagtattggagaagaagagaagaggaggagcgctggagaatggagatgaggcgttatgaa
gaagacatgtactggagacgcatggaggaggaacagcaccattgggatgagcgtcgtcgt
ctgccagatggaggatatccacaagggcctccgggccctcccggtctactcggagtccgt
cctggcatccctggcctgcagcctcaggggcctgtgcctccacgccggcctgactcctca
gatgaccgctacgtaatgaccaagcatgcagccatctacccctcagaagatgagcttcag
tccatccagaaaattgtgtcaattactgaacgtgctctcaaactggtgtctgacataatt
acagaccaggataagaccaaagaagaagacaaagagaagaaagaaccagcaaaagacaga
gccctgaagggagtgatgagagttggtgtcctggccaaaggcttgctgctccgtggggac
aagaatgtcaatctagtcctgctctgctctgagaagcccaccaagagcctcctcacctcc
atcgtggagcacctccccaaacagctaacactggtaacatcagagaaatacgaagtcaaa
ggatctgtccaggaagcagccatcattctgacgtcctgtaccgagccaaagatgcaagtg
acaatcacgctgacttcacccgtcatcagagaggaaaatggccgggatggagatgtaacc
tcgggtatggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgacgctctg
gctgttctgcgccacgctaagtggttccaggctagagccaatggtcttcagtcctgcgtg
atcatcatccgaatcctgcgagacctctgccagcgagttcccacgtggtcagccttccct
ggatgggccatggagctattggtcgagaaggccatcagtagcgcgtctgcccctctgagc
cccggtgatgcactgagacgtgtctttgaatgtatttcttctgggattttacttccaggt
ggaccaggactggtagatccctgtgaaaagaagcccgtggataccctagcaactttggga
gagcagcagagagaggacattacctcgagtgcccaatttgctcttaggctgctggctttc
cgtcagattcataaagttttgggaatggaccctctgccgcagatgaaccctcgcttcagc
atccgcaacagccggaagcgtcgccgtgacaacagcgatggcacagacagcttcgagggc
gaaggcaaaaaagacaagaaagattacgacagtttctaa
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integrated database retrieval system