Oreochromis aureus (blue tilapia): 116331766
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Entry
116331766 CDS
T07295
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116331766 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116331766 (nup54)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116331766 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_a-b
Nup54_C
CDH23_a-b
Motif
Other DBs
NCBI-GeneID:
116331766
NCBI-ProteinID:
XP_031610412
Ensembl:
ENSOABG00000023454
UniProt:
A0A668VRL5
LinkDB
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Position
LG7
Genome browser
AA seq
566 aa
AA seq
DB search
MAFNFGGATSNPAASTSGFSFGSFGAKTTPSTTFGFGTPATTTTASSGFGTLTAPGFGAA
TTTTAAPATGFSFGSTNTGTFGGFGTTTTTAAAPGATFSFAPPATGSLFGNTQNKGFGFP
TGLSTGTAAGTSGFGTGTGLGATSLGGFGGFNIQQTQQQQGGLFGQQAGQNQSTQLYQQV
TALSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNNNPPVEFNQENPFCRFKAVGYSCI
PMSKDEDGLVVLILNKKEADVRAQQQQLVESLHKILGNNQTLTVNVEGVKALSNDQTEVI
IYLVERSPNGTSKRIPASTLFSYLEQTNIKAQLTQIGVAMSVTRTELSPAQLKQLLQNAP
AGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLQIQEQMTKQHQTRVDIISNDISEL
QKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSEL
NAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIRQHLKQQQEGLSHLISVI
KDDLEDIKLIEHGLSDSGHMRGGILS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaattttggcggtgccacgagcaacccagcagcaagcacgtccgggttttca
ttcggttcatttggagccaaaactacgccatcgacaacatttggcttcgggaccccagcc
actaccaccacagcctcatccggattcggtactctaacagcccctggttttggggcagcc
accaccaccactgctgcaccagccacaggctttagctttggctccaccaacactggcaca
ttcggtggcttcggaacaacaacgacaactgctgctgcaccaggggcaacatttagcttt
gctccccctgcaacgggaagcctgtttggtaacacgcagaacaaagggtttgggttcccg
actgggcttagcacagggactgctgcaggaacgtcgggatttggaactggaactggacta
ggagcaactagcctgggtggctttggaggctttaatatccagcagactcagcagcagcaa
ggaggcttgttcggtcagcaggcgggtcagaatcagtccacccagctttaccagcaggtc
accgctctgtcagctcccaccttgttaggagatgagcgtgactccatacttgccaaatgg
aaccagctgcaggcatactggggcacagggaagggctactacagcaacaacaacccacct
gtggagttcaatcaggagaacccattctgcaggttcaaggcggtggggtacagctgcatc
ccgatgagtaaggatgaagatggtttagtagtcttgattctgaataaaaaggaagctgat
gtgagagctcagcagcagcagctggtcgagtccctccacaagatcctaggaaacaaccag
accctcactgtcaacgtagagggtgtcaaagccctgtcgaatgaccaaacagaggtgatc
atttatttggttgagcgctctcccaatggcacctccaagcgaatcccagcgagtaccctc
ttcagctatctggagcagactaatataaaggcccagctcactcagattggagtggccatg
tcagtgacacgcacagagctgtccccagcacagctcaaacagctgctgcaaaatgctcct
gcaggagtggatcctatcatttgggaacaggccaaggtggacaaccctgatccagagaag
ttgatcccagtgcccatggtaggatttaaggagctgctccgcaggctgcagatccaggag
cagatgactaaacagcaccagaccagagtggatattatctccaatgacatcagtgaactg
caaaagaaccaagcgaccacagtggcaaagatcgcccagtacaagaggaagttgatggat
ctatctcaccgagtgctgcaggtgttgatcaaacaggagatccagcgaaaaagtggctat
gctatccaagtggacgaggagcacctcagggtgcagctggacaccattcagtctgaactc
aatgcccccacacagttcaagggtcggttaaatgaattaatgtcccaaatccggatgcag
aaccactttggagctgtgagatcagaagagcgttacagtgtggacgcagacctcctcaga
gaaatcagacagcacttaaaacagcagcaggaaggtttaagtcatttgatcagtgtcatc
aaagatgacttggaagacatcaaacttatagagcacgggctgagcgacagcggacacatg
agaggaggcatcctcagctga
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