Oreochromis aureus (blue tilapia): 116332247
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Entry
116332247 CDS
T07295
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04140
Autophagy - animal
oau04148
Efferocytosis
oau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116332247 (vps18)
04148 Efferocytosis
116332247 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116332247 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116332247 (vps18)
Membrane trafficking [BR:
oau04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116332247 (vps18)
Hops complex
116332247 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf_RING_Vps8
zf-RING_2
zf-ANAPC11
zf-C3H2C3
zf-RING_UBOX
zf-RING_11
LETM1_C
zf-rbx1
DUF1664
DUF5600
Motif
Other DBs
NCBI-GeneID:
116332247
NCBI-ProteinID:
XP_031610988
Ensembl:
ENSOABG00000022575
LinkDB
All DBs
Position
LG15
Genome browser
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNIRQSAQQHSRLSSTNIGITHSGFVNARLEEEKPIFNKQRIDFTPPEK
INHLAVCNNQLCMSLGKDTLLRIDLAKPDQPNQTELGRKDDSKVHRLFLDPTGSHLLISL
NTSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGNETSTGPILVGTSQGIIFEAEISA
NEGSLFNTNPDQYFRQVHSVEEDGKPAPVCCLEVERGLENKYFIIATTRKRLFQFVGKVA
EGSEQQGFSSIFNQNQDLLPSFQEFPANMGHSEITFYTPKLRTSPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWEYTPDIDLNHNKPISIVLTQFHFLLLLHDRVKAICTLNGQVVYE
DVFPDKFGSLKKMIKDPVGGLVWIYTERAVFRYHIQRESRDVWQMYMSMNKFDLAKEYCR
DRPECMDMVLAKEAEHCFQNKRYLESAMCYAQTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKPSERTQITLLVTWLAELYLNRLGQLESDGNSVIFKETRDEFRQFLSSSKHRDCLY
NNRTTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDEYSAALDVLSKHCDEKLFYK
FSPVLMQHIPKNVVDAWIQMGKRLDPKKLIPALMNYSQMGSTQQINETIRYMEFCVYELM
VTEEAIHNYLLSLYAKYKPDSLLWYLEQAGTHASEIHYDLKYALRLCAEHGYRQACVLVY
RIMELYEEAVDLALEVDVDLAKSCANLPEDDEELRKKLWLKIAKHVVQKEEDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICLSLEEYNQHIEELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHNDCLLQEVTPHLSAFKQNRLED
LHKKLAATTQSSKSRHRPAPKDEGDTSSLGKATAGTSREQIKSDIDDIVASECVYCGELM
IKSIDKPFIDPQKFEEEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaattctcgatgagtacgaggattctcaaaacatccggcaaagtgcccagcag
cacagccgcctgtcaagcaccaacatcgggataacccattctggctttgtcaacgcgagg
cttgaagaagagaagccgatattcaacaagcagaggattgatttcaccccacctgagaag
ataaaccatctggctgtctgcaacaatcagctgtgcatgagtctgggaaaggacaccctg
ctaaggattgacttagcaaaaccagatcaacccaaccagactgaattaggaaggaaagat
gacagtaaagtgcacagactgttcttggatccaacgggctcccatctgctgatcagcttg
aacaccagtgagtgtctgtacctcaacaggaacacccagaaggtgcgcagtttgtcccgc
tggagaggccacctcatcgagagtgtgggctggaacaagctgctgggcaacgagaccagc
acaggacccatcctggttggcacgagtcaaggcatcatttttgaggcagagatctctgcg
aatgagggcagcttgtttaacaccaatccagatcaatacttcagacaggtccactctgtg
gaggaggatggcaaacctgctccagtctgctgtttggaggtcgaacggggcctggagaac
aagtactttatcatagctaccacacgcaaacgcctgttccagtttgtgggtaaggtagcc
gaggggtcggagcagcaaggcttcagttccatcttcaatcaaaatcaggacttgctgccc
agtttccaggagtttccagccaatatgggacacagcgagatcaccttctacacccccaag
ctgcgaacgtcccccaaggcgttcgcctggatgatgggtaatggagttctttatggtcag
cttgactacgtcaggcctgattccctgctgagtgatgtgcaggtgtgggaatacactccg
gacattgaccttaatcacaacaagcctatctccattgtgctgacacagttccacttcctg
cttctgcttcatgaccgagttaaggccatctgcactctgaacgggcaagtggtttacgag
gacgtgttcccagataaatttggcagcctcaagaaaatgatcaaagacccagttggcggg
ttggtgtggatctacactgagcgggcagtttttcgatatcacatccagcgggagtcgagg
gatgtctggcagatgtacatgagcatgaataaatttgatctggccaaggagtactgtcgc
gatcggcctgagtgcatggacatggtgctggcaaaggaggctgagcactgtttccagaat
aaacgctatctggagagcgccatgtgctatgcacaaacacagaactattttgaagagatt
gctctcaagttcatagaagccaaacaagaggaggccttaaaggagttcttactgaagaag
ctaaacaatctcaaacccagtgagagaacgcagatcaccttgttggtcacctggttagcc
gagctctacttgaatcgcctcggccagctggagagtgacggcaacagcgtcattttcaaa
gaaacccgtgacgagtttcgtcagttccttagcagctccaagcacagagactgcctgtac
aacaaccgcaccaccatctacgacctgctggccagccacggcaacgtggacgacatggtt
tacttctcagtcgtcatgcaggactacgagagagtgatatcccactactgccagcacgac
gagtacagcgctgctctggatgtgctctccaagcactgtgacgaaaagcttttttacaag
ttctccccggtgctcatgcagcacattcccaaaaacgtggtggacgcgtggattcagatg
ggcaagaggctggacccaaagaagctcatcccagctctgatgaactacagccagatgggc
agcacgcagcagatcaatgagaccatccgctacatggagttctgcgtttatgagctgatg
gtaacagaggaggccatccataactacttgctgtcgctttatgcaaagtacaaaccagac
tctctgctatggtatctggagcaggcgggcacacacgcctcagagatccactacgacctc
aagtatgctctcaggctgtgtgcggagcatggctacaggcaggcctgtgtgctggtttat
aggattatggaactgtatgaggaggcagtggatcttgctttagaagtagacgtggacttg
gccaagtcctgtgctaacctcccagaggatgatgaggagttgaggaaaaagctttggcta
aaaatcgccaagcacgtggtgcagaaggaggaagatgttaagaaagccatgaactgtctg
tccagctgcaacctgctcaaaattgaagacatcctacctttctttccagactttgtcacc
atcgaccactttaaggaggccatctgcctttccctggaggagtacaaccagcacattgaa
gagctgaagcaggaaatggaagaggccacagagagcgcaaaacgtattagggaagacata
caggaaatgaggaacaagtatggtgtagtggattcccaagaaaagtgtgctgcttgtgac
ttcccattgctcaacaggcccttttatctgttcctctgtgggcacatgttccacaatgac
tgcctgttgcaggaggtgactcctcatttgtcggccttcaagcagaatcgcctggaggat
cttcataaaaagttggcagcaaccacgcaatcatccaaatcgcgccaccgtccagcacca
aaggatgagggagacacatcaagtttgggcaaggccactgcaggcacaagccgtgagcag
ataaaatcagacattgatgacatcgtcgcatccgagtgcgtatactgcggcgaactgatg
atcaaatccatcgacaagcctttcatcgatccacagaaatttgaggaggagaaatccagc
tggctgtga
DBGET
integrated database retrieval system
