Oreochromis aureus (blue tilapia): 116332393
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Entry
116332393 CDS
T07295
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116332393 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116332393 (usp39)
Spliceosome [BR:
oau03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
116332393 (usp39)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
116332393
NCBI-ProteinID:
XP_031611202
Ensembl:
ENSOABG00000023166
LinkDB
All DBs
Position
LG12:19440971..19446226
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AA seq
501 aa
AA seq
DB search
MVSLKREREVDLDDDDDNEDGVAAKVGRGHAVEDRRSRHCPYLDTINRSVLDFDFEKLCS
ISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSS
LEDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSN
VPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVL
CSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKAFQGYMRIFSKKLPHPDLP
PEEKEALLTTDEYQEQMSESSFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGST
EKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTE
EAQATEKNTTYDLIANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSE
AYIQIWKRQESNDGRNNHTGI
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggtttctttgaagcgagaaagagaggtggatttagatgatgatgatgacaatgaagac
ggagtggcagcaaaagttggacgaggacatgcagtagaagaccgaagaagccgccactgt
ccttaccttgacaccataaacaggagtgtgctggacttcgactttgagaaactgtgctcc
atctctctctcccacatcaatgtctacgcctgccttatatgtgggaaatactttcaagga
agaggtctgaagtcccacgcttacactcacagcgtacagtttacccatcatgtgttcctc
aatctgcacacactcaagttttactgtctgccagataactatgagatcatcgattcatca
ctagaagatatcacatacgtgctgaagccaactttcaccaagcagcacattgcagggctg
gacaagcagggtaaactgtacagagcctatgacggtaccacctacttaccgggcattgta
gggctcaacaacatcaaagccaatgactatgccaatgtggtgttacaggctttttctaat
gttccacctttgcgaaattacttcctggaggaggaaaactacagaggaatccgcaggccc
ccaggagacatcatgtttctcttggtgcagaggtttggtgagctgatgcgcaaactctgg
aatccaagaaactttaaggcccatgtgtcgccccacgagatgttgcaggctgtagtgttg
tgcagcaaaaagaacttccagattacaaagcaaggtgatgctgtggacttcatgacgtgg
ttcttaaatgccctgcatggtgctcttggaggcacaaagaagaagccatcaatcattaca
aaagcatttcaaggctacatgcggatcttctccaaaaaactcccacaccctgatttgcca
ccagaagaaaaagaggctctgcttacaacagatgagtatcaggagcagatgtctgagtct
tcctttctctttctgacccttgacctcccaactgctccattgtacaaggatgaaaaagag
cagcttataatccctcaggtccctctcttcaacatcctggccaagttcaatggcagcaca
gagaaggagtacaaaacctacaaagagaattttctcaaaaggttccagttgaccaaactg
cctccgtacctcatcttttgcatcaaaagattcaccaagaacaacttctttgtggaaaag
aaccccacaattgtcaacttccctataacgaatgtagaccttcgtgaatacttgacagaa
gaagctcaagccaccgagaagaacacgacttatgacctcattgcaaatgtagtgcatgat
gggaagcccactgagggagcgtacagaatacatgttctgcatcatggaactggaaagtgg
tacgagatgcaggacctgcaggtgactgacatcctccctcagatgatcacactttcagag
gcttacatccagatctggaagaggcaagaaagcaatgatggaagaaacaaccacacaggg
atttaa
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