Oreochromis aureus (blue tilapia): 116332492
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Entry
116332492 CDS
T07295
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03030
DNA replication
oau03410
Base excision repair
oau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116332492 (pole)
03410 Base excision repair
116332492 (pole)
03420 Nucleotide excision repair
116332492 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oau03032
]
116332492 (pole)
03400 DNA repair and recombination proteins [BR:
oau03400
]
116332492 (pole)
Enzymes [BR:
oau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116332492 (pole)
DNA replication proteins [BR:
oau03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
116332492 (pole)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
116332492 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
116332492
NCBI-ProteinID:
XP_031611330
Ensembl:
ENSOABG00000024026
LinkDB
All DBs
Position
LG12:20590057..20605460
Genome browser
AA seq
2292 aa
AA seq
DB search
MVLQNSGRYKADRGPSGDPESQDDGSSLSALKRLERSQFTDEMDARFGFDRMKEPGEKTG
WLINMHPAEILDEDKRMISAVDYYFIQEDGSRFKVSLPFKPYFYIATKKNCEREVISYLS
KKFQGKVAKLEILPKEDLDLPNHLVGLKRNYIKLAFNTVDDLVKVKREIAPAVRKNRERE
QSNDAYTSMLSSALSGGNVTSVDEDGMSKSISDQLDNIVDMREYDVPYHVRVSIDLKIHV
AHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDNEAALIQRWFDHVQETKPNIFV
TYNGDFFDWPFIEARAALHGLSMHREIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQIFNKLTDDGHVLDSETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAVEEEEKIPLEQVTNFNEVC
DEIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ATCQRRMTWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHTLTREEQAKHEK
KRLADYCKKAYKKTHVTKLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
SAQDSGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNIM
VKEGFTNDQYHELVDPASVTYNIRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSK
AANMPDAELFDLISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVI
SRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDMDIRSILDWSYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQIAHQPL
EAGPAADIEDFGMPPRPLQPAILISTKRKRASQGDDSQVESQDLELTQSWREILGPPPPM
GKTREEHQVWLRYHKKKWELQLKQRKERKKRRRLLDGEAQPVGGGVIRGGPITGLGSFLR
RTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGAT
YKKVNRMLPRSNMVYYLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQ
LGCVCMVNKHVVRDMAGREADAFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGHKALF
GLFIPSQRKASIFVLDTVRSNQMPNLSNLYTAERTALLEKTTEELLPPEKHTFEVRAEND
MKAISRALQRILLNYKEERRGPTLIAVQSNWELRRLTAGMPVLEEFPVVPVHVVDEISYN
VLDWQRLGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKH
NHLLWLSPTSRPDLGGKEADDSRLVMENDDRGSVEINAQGCYSTACVELDLQSLAVNTIL
QSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRLG
STVVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSKEIFHSLSISFSRCWEFLLWMDPA
NYGGVKGKLPSSVMYGEEGAQQKKTRQEEGDEDGSEDEDEENAEEEDGDGETDEVEDLIE
SNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNGPGATPVKRRGNSQASQQA
IGDLSALPGMISFSQEYVSSELTQNIFTITQKIQKKVTGTRSVTHTSEMFPILPGSHLPL
NNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSDEAQFRDPCNSYILPEVI
CHHCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYDTNSIEMALVEALQKKLMSYTLQ
DLVCSKCKGVKETNMQLYCKCAGDFDLTFSAKSFSEQIAVFRNIASHYNMSFLEETIGWL
LIMSPQINQGVH
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcagaacagtggacgctacaaagcggaccgaggaccgagtggggatccggaa
agccaggatgatggatcctccttatcggccctcaagcggctggagcgcagtcagttcacc
gacgagatggacgctcgcttcggattcgacaggatgaaggagccgggagagaaaacgggc
tggctgatcaacatgcaccccgcagagatcctggatgaagacaagaggatgatcagcgcg
gtggactattatttcatacaggaggatggaagcaggttcaaggtgtctctgcccttcaag
ccatatttttacattgcgacgaaaaagaactgcgagagagaagtcatctcatacttatct
aagaagttccaaggaaaggtggcaaagctcgaaattctcccaaaagaagacctggacctg
ccaaaccaccttgtcggactgaagagaaactacatcaagctggcgttcaacaccgtggac
gacctcgtgaaggtcaagcgtgagattgccccggcggtacgtaaaaaccgagagagggag
cagtccaacgatgcctacacctcaatgttgtcaagtgcgctatcaggaggcaacgtgacc
tcagtggatgaagacgggatgtcaaagagtatttcagatcagttagacaacatagtggac
atgagagagtatgacgtgccttaccatgtgcgtgtgtccattgacctcaagatccacgtg
gctcactggtacaacgttcgatacagaggcagcgcttacccgccagagattgtacggaga
gacgatcttgtggagcgaccggaccccgttgttttggcgtttgacatcgagaccaccaag
cttccgctgaaattcccagacgcggagacggatcaaattatgatgatctcctacatgata
gatggacaggggtttctaatcacaaaccgagagatcgtctctgagaacattgaggatttt
gagtttacccccaaacctgagtatgaagggccattcactgtttttaatgaggacaatgag
gcagctctcattcagaggtggtttgatcacgttcaagaaacaaagccaaacatctttgtg
acctacaatggagacttctttgattggcctttcattgaggctcgggctgccctccatgga
ctgagcatgcacagggagatcggtttccagaaagataaccaaggagagtacaaggccagt
caggccatccacatggattgtttaaggtgggtaaagagagacagctacttgccggtggga
agccacaatctgaaggcagcagcgaaggctaaactgggttatgaccccgtggagctcgac
ccagaggagatgtgccgcatggcaactgaggaaccgcagactctagcaacctattctgtg
tcagatgccgtggccacatattacctgtacatgaaatatgtccaccccttcatcttcgct
ctgtgtaccatcatccccatggagcccgatgaggtgctgcgtaaaggttcggggactctg
tgtgaagctttacttatggtgcaggccttccacgccaacatcatcttccccaacaagcag
gagcagatcttcaacaaactgacagacgacggccacgtcctggactccgagacttacgtg
ggcggtcacgtggaggcgctggagtctggagtgtttcggagtgacatcccctgccgtttc
aaaatgaacccggctgcatttgacttcctgctgcaaagagttgagaggacgatgcgtcat
gccgtcgaggaagaggagaaaatccctctggagcaagtcactaacttcaatgaggtttgt
gacgaaattaagaaaaagctgacgtccctcaaggaggttccaaacaggattgaatgtccc
ctcatctaccatctggacgtaggggcaatgtaccccaatattattctcaccaaccgcctt
cagccatccgctatggttgatgaggccacgtgtgctgcctgtgacttcaacaaacctggt
gccacgtgtcagaggaggatgacctggcaatggagaggagaaatcatgcccgccagccgc
agtgagtttcaccgcatccagcagcaacttgagtctgagaagttcccgccgctgttcccc
aacggtccacctcgggctttccacacgctcaccagggaggagcaggccaagcatgagaag
aaacgtctcgcagactattgtaagaaggcttataaaaagacacacgtcaccaagctggag
gagcgagttaccaccatctgtcagagggaaaactccttctatgtggatactgtaagagct
ttcagagatcgccgttatgaattcaaaggacttcacaaggtatggaagaagaaactttcg
tcagctcaggacagcggagacgccgctgaggtgaagcgctgcaaaaacatggagatcctg
tacgaatcccttcagctcgctcacaagtgcattctcaactctttctacggctacgtcatg
aggaagggggcccgatggtactctatggagatggccggcattgtgtgtttcactggagcc
aatattattactcaggccagagagctcattgagcaaatagggaggcctcttgagttggac
actgatggtatctggtgtgtcctccccaacaccttcccagagaactttgtggtgaagacc
agtaatgagaagaagcccaaggtgactatctcctacccgggtgccatgttgaacatcatg
gtaaaagagggatttaccaacgatcagtaccacgagctggtcgaccccgcgtccgttact
tacaacatcagggcagagaacagcatcttctttgaggtggacggaccgtatctggcaatg
atcctgccagcctccaaagaggagggcaagaagctgaaaaagaggtacgctgtgtttaat
gaggatggttctttagccgagctgaagggttttgaagtgaagagaagaggagagctccag
ctcattaagatttttcagtcgtctgtgttcgaggctttcctcaaaggaactactctagag
gaggtctacgcttcagtggccaaagtggccgactactggctggatgtactttacagcaag
gctgccaacatgccagatgcagagctttttgacctgatttcagagaatcggtcaatgtcc
agaaaactcgaggattacggtgagcagaagtccacgtccatcagcacagctaagaggctg
gcagagttcctgggggatcaaatggtgaaagatgccggtctgagctgtcgctacgtcatc
tcccgaaaacctgagggttcccctgtcacggaaagggccattcctctagccatctttcag
gccgagccaagcgtcaagaaacatttccttcgcaagtggttaaagatgcccagcttgcat
gacatggacatccgctctatccttgattggagctattacatagagaggttgggtagtgca
atccagaaaatcatcaccattcctgctgctctgcaacaggtgaagaatcctgttcccaga
gtgaggcatcctgactggctacacaagaaactcctggagaaaaatgacatatacaagcag
aagaaaattagtgagctgtttaccagcgaaggcaagagacagattgcccatcagcctctt
gaagcaggcccagctgctgacatagaggatttcgggatgccacccagacccctgcagcca
gctatccttatcagcactaagcggaagcgggcatcacagggagacgacagccaggtggag
tctcaggatttagagctcacgcagtcctggcgggagatcctgggaccgccccctcccatg
ggaaaaacacgggaggaacatcaagtttggctgcgctaccataagaaaaagtgggagctg
cagctgaagcagagaaaggagaggaaaaagaggaggaggctgctggatggggaggctcaa
ccggtcggcggaggagtgatcagaggtggtcccatcacaggcctagggagcttcctccgc
agaacagctcggagcatcctcgatatgccgtggcaaattgtccagattgcagaaactagt
caccctggtctgtataagctctgggctgtgattggaaatgacctccactgcatgaaactc
aacatcccacgtgtcttctacgttaatcaaaaagtcccaaaacaggaggagggagcgacg
tacaaaaaggtgaaccgcatgctgcctcgctccaacatggtttactacctctatgagtac
tctgtgccagaggacatgtaccaagagcacatcaatgagatcaatgccgacctttctgca
cccgacatcgaaggggtctatgaaacacaggttcctttgctgtttcgagctttggtgcag
ctgggatgtgtgtgcatggtcaacaaacatgttgtgagagatatggccggcagggaggct
gacgcgtttgatctggagcatctggagatgaggtcgctggcccagtttagctacctggaa
cctgggagtgttcgccacatgtacttgtatcatcacagccaaggccacaaggctctgttt
ggcctcttcatcccctctcagcgcaaagctagcatcttcgtcctggacacggttcgaagc
aaccagatgcccaacttgagtaacctctacacagccgaacgcacggccctcctggagaag
acgacggaggagcttctgcctccagagaaacacacctttgaggtgcgggctgaaaatgac
atgaaggcaatctcacgtgcgctccaacgaatactcctaaactacaaggaggagcgccgt
gggcccaccctcatcgcagtgcagtcaaactgggagttgcgtcgattgacggcagggatg
ccggtgctcgaggagttcccggtcgttccggttcacgtggttgatgagatcagctataac
gtgttggactggcaacggctcggtgcccggcgcatgatccgccactacctcaacctggac
agctgtctgtcacaggcttttgacatggccagatattaccacttacctgtggggaacttg
ccacaggatgtgtccatctttggctcagacttattcttggcaagacatctacggaagcac
aaccacctgctatggctttcgcccacatccaggcctgacctgggaggaaaagaggctgat
gacagccgtctggtgatggaaaatgatgacagaggctctgtggagatcaatgctcaggga
tgttattcaacagcatgtgtggagttggacctgcagagcctggcggtgaacaccatcctc
cagtcgcagcatgtcaacgacatggagggcggagccagcctgggcgtcagttttgatgtg
atccagcaggcatctttggaggacatgatgtcaggaaaccagggagcaagcgctctggct
agctacgatgagacggctctctgctccaacaccttcaggatcttaaagagcatggtggtg
ggatgggtcagggagatcacacagtaccacaatgtgtatgcagacaaccaggtgatgcat
ttctaccgctggctgcgctcccccagctcgctgctgtatgaccccgccctgcaccgcacc
ctgcataacatgatgaagaaggtgtttctgcagttggttgcagagttcaaacgtcttggc
tcgactgtggtgtacggaaactttaacaggatcattctgtgtaccaaaaaacgcaggatt
gatgatgccatcggctatgttgagtatatcaccaacagcatccattccaaagaaattttc
cactctttgtccatctccttctcacggtgctgggagttcctgctgtggatggaccctgcc
aactatggtggtgtgaagggcaaactgccctccagcgtcatgtatggagaggaaggagcc
caacagaagaaaaccagacaagaagagggggatgaggatggcagtgaggatgaagatgaa
gaaaatgctgaggaggaggatggagatggagagacggatgaagtagaggatttgattgag
agtaactggaatatcatgcagtatcttcctcaaaccgcctcctgtcagaagtacttcctc
atgatcgtctcagcgtatattgcagcggtctatcacagcatgaaagaggagctgagacgt
aacggcccaggagcaacaccagtaaagagacgtggcaacagccaggcttcccagcaggcc
atcggggatctgagtgcacttcctggaatgatctccttctcccaggagtacgtgtccagc
gagctgacacagaacattttcaccatcactcagaaaatccagaaaaaggtcactggtacc
aggagtgttacccacacctcagagatgttccccatcctgcctgggtcacaccttccactc
aacaacccagcactggagtttatcaaatatgtctgccaggttctttcactagatgccaac
attgtaaatcaggtgaacaagctgaagagagacctcctacgtcttgtggatgttggagag
ttttcagatgaagcccagttccgtgacccatgcaactcctacatcctgccagaagttatc
tgtcaccactgcaatttctgtcgggaccttgacctctgcaaggacccgtcagtggcacag
gatggttcggttttgcctcagtggttctgctccaactgtcaggcgcagtatgacaccaac
tctattgagatggctctggtagaagctctgcagaagaaactgatgagctacacgctgcag
gatctggtgtgtagcaaatgtaagggagtgaaggaaaccaacatgcagctgtactgcaaa
tgtgctggagactttgacctcaccttctcagccaagagcttctctgagcagatcgcagtg
tttaggaacatagcgtcccactacaacatgagcttcctggaggagaccataggctggctg
ctcattatgagccctcagatcaaccagggtgttcactga
DBGET
integrated database retrieval system
