Oreochromis aureus (blue tilapia): 116332579
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Entry
116332579 CDS
T07295
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oau03037
]
116332579 (ift88)
Cilium and associated proteins [BR:
oau03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
116332579 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_14
TPR_19
TPR_6
TPR_7
TPR_16
TPR_11
ANAPC3
TPR_17
TPR_CcmH_CycH
TPR_9
TPR_10
ARM_TT21_5th
DUF2225
ARM_TT21_4th
TPR-S
ARM_TT21_N
TPR_MalT
HAT_PRP39_C
TPR_15
ARM_TT21_C
HEAT_Nup120
Consortin_N
SHPRH_helical-1st
MIT
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
116332579
NCBI-ProteinID:
XP_031611450
Ensembl:
ENSOABG00000007574
LinkDB
All DBs
Position
LG16:27667038..27689142
Genome browser
AA seq
826 aa
AA seq
DB search
MEHVHLAVEEDDLYSGYNDYNPTFDSEELENDVGFQQAVRTSHGRRPPMTAKFPGTPIGP
RSLATSFGARLHMASSMGRPMTGAVQDGSARPMTAVRAAGYTSALSRGSAFDPLGQSRGP
APALEAKNEDTPEEKIKILEKKVNDLIEESCMAQSMGALQVALEKAKEAGRKERALVRQR
EQSGSADHINLDLTYSVLLNLANQYTNNEMYPEALNSYQIIVKNKMFSNAGRLKVNMANI
YFKQKNYPKAIKFYRMALDQITNAHKEMRIKIMQNIGVVFICMGQYTDAITSFEHIMSES
PNIKTGFNLILCYYAIGDRERMKKAFQKLISVPLGIDDEDKYIPSNEDTSSNMVIEAIKN
DKLHQMERDLKTLAEKYIMTAAKLIAPAIETLFATGFDWCVDMVKSSQYVELANDLEINK
AITYLRQKDFNQVEAVETLKAFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYADLAMNA
DRYNPAALINKGNTVFVKQEYEKAAEFYKEALRNDSSCTEGLYNLGLTYKRLNRLEEALD
CFLKLHAILRNSSQVMYQLASLYELLENPEQAIEWLMQVISVTPTDAQALAKLGELHDGE
GDKSQAFQYYYESFRYFPCNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLM
VASCYRRSGNSQKALETYKEIHRKFPENVECLRFLVRLCTDMQLKEVQDYATKLKKVEKM
KEIREQRIKSGREGSARSRREGRESSAGSADSGRSSSSTKGERLSAKMRSLPGSNEPYEA
NSPKELDASYVDPLGPQMDRPKTGVKKRVEDDDFADEELGDDLLPE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgtgcatctggctgtagaggaggacgacctttactcgggttacaatgattat
aatccgacatttgactcggaggagctggagaatgatgtgggcttccagcaagcagtgagg
acaagtcatggaagaagacccccgatgactgccaagtttcctggcactcccattggacct
cgatctttagctacttcttttggcgctcggcttcatatggcctcttcaatgggacgaccc
atgactggagctgtacaggatgggtcagcccgaccaatgactgccgtcagagcagcaggt
tacacctccgccctgagtcggggctcagcctttgaccctctgggccagtccagaggtcct
gcacctgcactcgaagcaaagaatgaggatacgcctgaggagaagatcaaaatcttggag
aagaaagtgaatgacctgatagaggagagctgcatggcacagagcatgggagccttacaa
gtggcccttgaaaaagccaaagaggcagggcggaaggagcgagccctggtcagacagagg
gaacagtctggcagtgcagaccatataaatttagacctcacctactctgttttgctcaac
cttgccaaccaatacacaaacaatgaaatgtacccagaggccctgaacagctaccagatc
attgtgaagaataaaatgttcagtaacgcaggccgcctgaaagtcaacatggccaacatc
tactttaaacagaagaactatcctaaagccatcaagttctaccgaatggcgctggatcag
ataacaaatgcccacaaagaaatgaggatcaagatcatgcagaatatcggtgtagtgttt
atctgcatgggccagtacacagatgccattacgtctttcgagcacatcatgagcgagagt
ccaaatatcaagacaggcttcaaccttatcctgtgctactatgctatcggtgacagagag
aggatgaagaaggcctttcagaagctcatctctgttcctctgggcattgatgatgaagac
aaatacatcccttccaatgaagacaccagctccaatatggtcattgaggccattaaaaat
gacaaacttcaccagatggagagagatctaaaaaccctggctgagaaatacatcatgaca
gcagccaagctcattgccccagcgattgagactttgtttgctactggatttgactggtgt
gtcgacatggtgaagagttctcagtatgtcgagcttgccaatgatttagagattaacaaa
gccatcacctacctcagacagaaggacttcaaccaggttgaggcagtggaaacactgaag
gcatttgagaagaaggacagcagagtgaagagcgctgcagccactaacctctctttcctc
tattttctggagaaagactacgaccaggctgaccgatatgctgaccttgctatgaatgct
gatcgttacaacccagcagcacttatcaacaagggcaacacggtgtttgtcaaacaggaa
tatgaaaaggctgcagagttctacaaagaagcattgaggaatgattcctcgtgcaccgaa
ggcctttacaacctgggtctgacttataaaagactgaatcgtctagaggaggctctggac
tgcttcctgaagctccatgccattctgaggaacagttcccaagtcatgtaccagctggcc
agcctctatgagcttctggaaaatcctgaacaagcaatcgaatggctaatgcaggtcatc
agtgtaactccaacagatgcccaggcactggctaagctgggagaactgcatgatggcgag
ggggacaaatcccaggctttccagtactattatgagtcctttaggtactttccctgcaac
atcgatgtgattgagtggctcggagcttactacattgagacacagttctgtgagaaagcc
attcagtactttgaaagagccacgcttatacaaccaacccaggtgaagtggcagctaatg
gtggcaagctgctacagacgaagtggaaactcccagaaagcactggaaacttataaagaa
atccaccgaaagtttccagaaaatgtggaatgcttgcgtttcctggtgcggctgtgcaca
gatatgcaattgaaggaagtccaagactacgccaccaaactgaagaaggtagagaagatg
aaggaaatcagagagcagaggataaaatcgggacgggaaggcagcgcgagaagtcgaaga
gaaggcagagagagcagtgcagggagcgctgacagtggtcgcagcagcagcagcactaaa
ggagagcgtctgagcgccaaaatgaggtcacttcctggttcaaatgagccttatgaagcc
aacagtccaaaagaactggatgcgtcctacgtggacccactggggcctcagatggacaga
ccaaagacgggagtcaagaagcgtgtggaggatgacgactttgcagatgaagagctagga
gacgacctgctgccagagtag
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integrated database retrieval system
