KEGG   Oreochromis aureus (blue tilapia): 116332977
Entry
116332977         CDS       T07295                                 
Symbol
nup42
Name
(RefSeq) nucleoporin NUP42 isoform X1
  KO
K14321  nucleoporin-like protein 2
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116332977 (nup42)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oau03019]
    116332977 (nup42)
Messenger RNA biogenesis [BR:oau03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116332977 (nup42)
SSDB
Motif
Pfam: zf_CCCH_4 zf-CCCH_4 zf-CCCH zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 116332977
NCBI-ProteinID: XP_031611949
Ensembl: ENSOABG00000018362
LinkDB
Position
LG22:complement(15058477..15077439)
AA seq 443 aa
MPVCNFFLQGRCRYGEKCWNEHPRGGNRGGGGGGGGGYNNYSNRSSGQQQPRSGGGGFGN
RVWVNPSQQKGNYIQPSSFSSHGSDDWGHGGGGGGGGGGRRENVKSSDFSFSSQNRFSAL
NTPSTFDRGGRGGGGGGRAAGGTVGDEDDDKKLEVIQMDMDVWEKSGQWGFSCYYSFQTL
VSGFTDLSPEELRLEYYSTRASGDLQGYMNAINQLLSQWKTRIQELKIMNPATRAALLAE
LNGAAPQGSSGGFGSTTATGFGASISSFGSKGFGAPAPAQASGFSFSASNSGFGSAATQS
SSTGFGNILAAPTQPPSGFSAASSSAPSASSFSFASSTTDKSAPASGFGSASGFSFSSTA
GSGFGVGAPATTGSSGPFGQTSGGFGAAAAQPTSGTGSAEGTSDSLFSPESKLTEEELSQ
FKAKKFTLGQIPLKPPPSNLLVV
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgccagtgtgcaacttctttcttcagggccgctgtcgttacggcgaaaaatgttggaat
gagcacccaagaggagggaacagaggaggaggaggaggaggtggtggaggatataacaac
tacagcaaccgctcctctggtcagcaacagcccagaagtggaggtggagggtttggaaac
agagtctgggtgaatccttcccagcaaaaaggaaactacatccagccttcatccttctct
tctcacggaagtgacgactggggtcatggaggaggaggaggaggtggtggtggagggcga
agagaaaatgtgaagagctccgactttagtttctcaagtcaaaacagattttcagctctt
aatactcccagcacctttgacaggggaggcagggggggaggaggaggaggaagggcagcg
ggaggaacagttggtgatgaagacgacgacaaaaaactggaagtcattcagatggacatg
gatgtttgggagaagtctggccagtggggattctcttgttattatagcttccagacactt
gtatctggtttcactgacctctcccctgaagagctccggctggaatactactccacaaga
gcttcaggagatctgcagggctacatgaatgccatcaatcagctgctcagtcagtggaaa
accagaatccaggaattgaagattatgaatccagccactcgtgcggcactgcttgcagaa
ttaaatggtgctgcacctcagggatcttcaggtgggtttggttcgacaacagcaactgga
tttggagcctccatctccagctttggaagcaaaggttttggtgccccagcaccagcccag
gccagcggtttcagcttttctgcttcaaatagtggatttggctctgcagccacacagtca
tcttcaacaggttttggtaacatcttagcagcccccacacagcctccctctgggttcagc
gctgcgtcctcctctgcaccttcagcttcaagtttctccttcgcctctagcaccacggac
aaatcagcacctgcttcaggatttggatctgcctctggatttagtttctcctctacagca
ggcagcggtttcggggttggagcccctgcgacaacaggaagcagcggtccttttgggcag
acgagtggaggatttggggcagcagccgctcaacccacttcaggaactgggtctgccgaa
ggaacgtcggacagtctgttttcccctgagagtaaactgaccgaagaggaactgagtcag
ttcaaggctaagaaattcactctgggacagattccactgaagccccccccttctaacctg
ctagtggtgtga

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