Oreochromis aureus (blue tilapia): 116332977
Help
Entry
116332977 CDS
T07295
Symbol
nup42
Name
(RefSeq) nucleoporin NUP42 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116332977 (nup42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116332977 (nup42)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116332977 (nup42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
116332977
NCBI-ProteinID:
XP_031611949
Ensembl:
ENSOABG00000018362
LinkDB
All DBs
Position
LG22:complement(15058477..15077439)
Genome browser
AA seq
443 aa
AA seq
DB search
MPVCNFFLQGRCRYGEKCWNEHPRGGNRGGGGGGGGGYNNYSNRSSGQQQPRSGGGGFGN
RVWVNPSQQKGNYIQPSSFSSHGSDDWGHGGGGGGGGGGRRENVKSSDFSFSSQNRFSAL
NTPSTFDRGGRGGGGGGRAAGGTVGDEDDDKKLEVIQMDMDVWEKSGQWGFSCYYSFQTL
VSGFTDLSPEELRLEYYSTRASGDLQGYMNAINQLLSQWKTRIQELKIMNPATRAALLAE
LNGAAPQGSSGGFGSTTATGFGASISSFGSKGFGAPAPAQASGFSFSASNSGFGSAATQS
SSTGFGNILAAPTQPPSGFSAASSSAPSASSFSFASSTTDKSAPASGFGSASGFSFSSTA
GSGFGVGAPATTGSSGPFGQTSGGFGAAAAQPTSGTGSAEGTSDSLFSPESKLTEEELSQ
FKAKKFTLGQIPLKPPPSNLLVV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgtgcaacttctttcttcagggccgctgtcgttacggcgaaaaatgttggaat
gagcacccaagaggagggaacagaggaggaggaggaggaggtggtggaggatataacaac
tacagcaaccgctcctctggtcagcaacagcccagaagtggaggtggagggtttggaaac
agagtctgggtgaatccttcccagcaaaaaggaaactacatccagccttcatccttctct
tctcacggaagtgacgactggggtcatggaggaggaggaggaggtggtggtggagggcga
agagaaaatgtgaagagctccgactttagtttctcaagtcaaaacagattttcagctctt
aatactcccagcacctttgacaggggaggcagggggggaggaggaggaggaagggcagcg
ggaggaacagttggtgatgaagacgacgacaaaaaactggaagtcattcagatggacatg
gatgtttgggagaagtctggccagtggggattctcttgttattatagcttccagacactt
gtatctggtttcactgacctctcccctgaagagctccggctggaatactactccacaaga
gcttcaggagatctgcagggctacatgaatgccatcaatcagctgctcagtcagtggaaa
accagaatccaggaattgaagattatgaatccagccactcgtgcggcactgcttgcagaa
ttaaatggtgctgcacctcagggatcttcaggtgggtttggttcgacaacagcaactgga
tttggagcctccatctccagctttggaagcaaaggttttggtgccccagcaccagcccag
gccagcggtttcagcttttctgcttcaaatagtggatttggctctgcagccacacagtca
tcttcaacaggttttggtaacatcttagcagcccccacacagcctccctctgggttcagc
gctgcgtcctcctctgcaccttcagcttcaagtttctccttcgcctctagcaccacggac
aaatcagcacctgcttcaggatttggatctgcctctggatttagtttctcctctacagca
ggcagcggtttcggggttggagcccctgcgacaacaggaagcagcggtccttttgggcag
acgagtggaggatttggggcagcagccgctcaacccacttcaggaactgggtctgccgaa
ggaacgtcggacagtctgttttcccctgagagtaaactgaccgaagaggaactgagtcag
ttcaaggctaagaaattcactctgggacagattccactgaagccccccccttctaacctg
ctagtggtgtga
DBGET
integrated database retrieval system