Oreochromis aureus (blue tilapia): 116333016
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Entry
116333016 CDS
T07295
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04510
Focal adhesion
oau04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116333016 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116333016 (lamb1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
116333016
NCBI-ProteinID:
XP_039471189
Ensembl:
ENSOABG00000021600
UniProt:
A0A668VKS8
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Position
LG7:complement(66364975..66401948)
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AA seq
1793 aa
AA seq
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MFHLQLALLLGLQVFTCAQESGATDDIGQPELSDVCTEGSCYPATGDLLIGRAHQLSSTS
TCGMNRPEPFCIVSHLQEEKKCFVCDSSEPYDELANRTDSHRIENVVTTFAPNRLKTWWQ
TENGMENVTIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAYDCESS
FPSVYQGPMRKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNL
RVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPIEGAGQITEGM
VHGHCLCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDAAVFAA
SGNMSGGVCDDCEHNTAGNNCEQCKPFYYQHPERDIRDANICQPCDCDPVGCLNGGLCDG
TTDVRAGLIAGQCRCKANVEGERCERCKPAHFGLSDEPEGCKACTCSPLGTLPGGNPCDR
ETGSCFCKRLVTGRDCDQCVPEHWGLSNDMDGCRPCDCDLGGAINNQCDHMTGQCVCRDH
MFGRRCDQVESGFYFIALDHYTYEAEDAKFGPGVTVVQRPHPQDRSPTWTGIGLANVPEG
AFLEFTVDNVPHSMEYDILIRYEPQLPDVWEEVLMAVMRPRPIQPDSRCINTVPDDDNQM
ISLHPSSRYVVLPRPVCFESGLNYTIRLSLPLYATFGDVQVPYTLIDSIVLMPHCKNLEI
FTGSEGGDSGGNVAWETFQRYRCLENSQSVIKTPMTDICKNFIFSISAMLHQGAKECHCD
PQGSLSTVCDPHGGQCECRPNVVGRNCDRCSPSTFQFGPNGCRVCGCDPQGSLSVFCDQL
TGQCSCVSGAYSRQCDRCLPGHWGFPTCRPCSCNGHADVCDPDSGRCIDCRDHTMGRACD
RCLDGYYGDPTLGSGDHCRPCMCPDGPGSPRQFAGSCYRSDDSQQVTCVCNTGYKGTRCD
ECSPGYYGNPEEVGGQCQPCQCNNNIDMLDPESCDARNGKCLRCLYHSEGAACQSCMLGY
YGNALLQDCRKCVCNRLGSVPSSCPSSECHCDRSSGQCHCLSNVVGQHCDRCAPDTWNMA
TGIGCQTCDCDPKHSYGTSCNEISGQCSCHTGFGGRTCSECREMFWGDPEIKCHACDCDP
RGISEQQCNKVSGHCVCVEGVSGPRCDTCARGFSGTFPNCSRCHKCFAEWDNIVGQLTNQ
THRLVNKVNALKASGANGPYRKSIESMERSVADIQAILDGNPASQPLTEIQELLQEASDL
MGALSHTLNLTEQTVVQVEDLDSAAGTKLDTVMSEAQKLEGTVQELLDQVEFIKNSDIRG
ATDSITKYFLQSQEAEVQANTSTIDSGSPVEASAALRQLTEDKLNQTREEFLKRQSEHAQ
KLDDLAGELQSLDLAELSSKTCGSPSLGQDACGSSSCGGLGCVNPEGRARCGGEGCSGAV
ATANSVLRKARDSEQEIVHAMEEVEKLSKMVSEAKLQADKARLSAQNVLMKTNRTKQKVD
QSNEELRSLIRHIRDFLTQDAADLESIELVANEVLAMQMPTTPAQLQNLTDEIRQKVGEL
GHVENILQESADDIQRAEKLLDEARQASEEARDVRDSVEKVKQALEEAQRAKTAASSAIQ
QATANIHNTSYLLSSVESETADAELKLSNATQRLQKLEQDVMLLKDKAANVTLSAKLTNQ
ESVSIRSMAEELKKELDGELKEKYAILEQLIGQKTGGMVDAKKRAQSLQQEAKELLLQAS
DKLQLLKDLEKSYEDNERALEQKVEQLVELEAAVKGLLQEISHKVTVYSTCVF
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaccttcagctcgcgctgctgctcggtctgcaggtatttacctgtgctcaggag
agtggggccacggatgacatcggccaacccgagctcagtgatgtgtgcactgaaggcagc
tgttacccagcaacaggagaccttctgattggcagagcccatcagttgtcgtccacctcc
acctgtggaatgaaccgacccgaaccattctgtatcgtcagccacctgcaggaggagaag
aagtgctttgtgtgcgactcatcggagccctacgacgagctggccaatcgcacagacagc
catcgcatcgagaacgttgtcactacgtttgccccgaacagactgaagacctggtggcag
actgagaatggtatggagaacgtcaccatccagctcaacctagaggctgagtttcacttc
acgcatctcatcatgaccttcaagacgtttcgacctgctgccatggtgattgagcggtca
gctgacttcgggaagacgtggcaggtttaccgttacttcgcttatgactgcgagtcgtcc
ttcccgtccgtttaccagggtccaatgaggaaggttgacgatgtcatctgtgactcgcgt
tactctgacattgagccatccactgaaggagaggtgattttcagagttttggatccagcg
ttcaggatcgatgacccgtacagtccccgaatccagaacatgctgaagatcaccaacttg
agggtaaagttcaccaaactgcacacgcttggagacaaccttctggactctcgcatggag
atcaaagagaagtactactacgccatctacgacatggtggtccgaggaaactgcttctgc
tacggacacgcctctgagtgcgcccccatcgagggagctgggcagataacagagggcatg
gttcatggtcactgcttatgtaaccacaacactaaaggtctaaactgtgaacagtgccag
gacttctaccacgacctcccctggagacctgcagagggacgcaacaccaacgcctgcaag
aagtgtaactgtaaccagcactcggactcgtgtcactttgacgcggcagtcttcgcggct
tcgggaaacatgagcggaggagtttgtgacgactgtgagcacaacacggctggaaacaac
tgtgagcagtgcaaaccgttttactaccagcatccagagagggacatcagagacgccaac
atctgccagccctgtgactgcgaccccgtgggctgtctgaacggaggactctgcgacggc
acaacggacgtccgagccgggctgatcgccggtcagtgccgctgtaaagcaaacgtggag
ggagaacgctgcgagcgctgcaagccggcgcatttcgggctgagcgacgagcccgaaggc
tgcaaagcgtgtacctgcagtccgctgggaactcttcctggaggaaacccctgtgacaga
gaaacaggaagttgtttctgtaaacgtctggtgaccgggcgagactgtgaccagtgtgtg
cctgaacactggggtctcagtaatgacatggatggctgcagaccatgtgattgcgacctc
ggaggcgccatcaacaatcagtgtgatcacatgactggtcagtgcgtctgcagagatcac
atgttcggccgccgctgcgatcaggtggagtctggattctacttcatcgctctggatcac
tacacctacgaggctgaggatgcaaagtttggacctggagtgacggtggtccagagacca
caccctcaggaccgtagtcccacctggacaggcatcgggctagccaatgtaccagagggg
gccttcttggagttcactgtagacaacgtccctcactcaatggaatatgacatcctgatc
cgctacgagccgcaactgccggatgtgtgggaggaggttctgatggcggtgatgagaccc
agaccgatccagccggacagtcgctgcatcaacacggtgcccgacgacgacaaccagatg
atctcgcttcacccgagttcacggtacgtggttcttcccagaccagtttgttttgaatcg
ggtctgaactacacaatccgcctcagcctgccactgtacgctacctttggggatgtccag
gttccgtatacgctgatcgactcgatcgtcctgatgcctcactgtaagaacctggagata
ttcacaggctcagagggcggggactcgggcgggaatgtcgcctgggagactttccagcgt
tatcggtgcctggagaacagccagagcgtcatcaagactccgatgactgacatctgcaaa
aacttcatcttcagcatctccgccatgttgcaccagggagctaaagaatgccattgtgac
cctcagggctcgctcagcaccgtgtgcgacccccatggtgggcagtgtgagtgccgcccc
aatgtggttggcaggaactgtgacaggtgttctccgtccacattccagtttggacccaac
ggctgccgagtgtgtgggtgcgaccctcagggttctctcagtgtgttctgcgatcagttg
accggacagtgttcctgtgtttcgggcgcgtacagtcggcagtgcgaccgctgtctgccg
ggtcactggggtttccccacctgccgcccctgctcctgtaacggtcacgccgatgtctgc
gaccccgacagcggccgctgcatcgactgccgggaccacacgatgggacgtgcctgtgac
aggtgtctggatggttactatggtgacccaacactggggtcaggtgaccactgtcgtccc
tgcatgtgtcctgacggccccggcagcccgcggcagtttgcaggaagttgttaccgcagc
gatgactcccagcaggtcacctgcgtctgcaacacaggatacaaaggtactcgctgtgat
gagtgctcgcctggttactatggaaaccctgaggaggtgggtggacagtgtcagccgtgt
cagtgcaacaacaacattgatatgctggaccccgaatcgtgcgatgcccggaacggcaag
tgtctgcgctgcctgtaccacagcgagggtgccgcctgccagagctgcatgctgggttac
tatggcaacgccctactccaggactgcaggaagtgcgtttgtaaccggctcggcagcgtt
ccctccagctgcccgtcctccgagtgtcactgtgaccgcagcagcggtcagtgtcactgt
ctatccaatgtggttgggcagcattgcgaccgctgcgcgcctgacacctggaatatggcg
actggcatcggttgtcagacctgtgactgtgaccccaaacactcgtacgggacgtcctgc
aacgagatcagcggtcagtgttcctgccacaccggcttcggaggaagaacgtgcagcgag
tgtagagaaatgttctggggagacccagagatcaaatgtcacgcttgtgactgtgaccct
cgcgggatctccgagcagcagtgcaacaaagtcagcggtcactgcgtgtgcgtggagggt
gtgtccgggccgcgctgcgacacttgcgctcgcggattctcgggaactttccccaactgc
agccgctgtcacaagtgcttcgccgagtgggacaacattgttggccagctgaccaatcag
acacaccgcttggtcaacaaggtaaacgccctcaaagctagcggtgccaacgggccgtac
aggaaatccattgagagcatggagaggagcgttgccgacatccaggccatcctagatggg
aatccggcatcacaaccgctaacagagatccaggagctgctgcaggaggccagtgacctg
atgggagccctgagccacacattgaaccttactgaacagactgtggtccaggtggaggac
ttggactctgctgcaggaactaaactggacactgtgatgtcagaggcacagaaactggag
gggacagtccaggagctcctggaccaggtcgagttcatcaagaactccgacatcagaggg
gcaacagacagcatcactaagtacttcctgcagtcccaggaggccgaggtccaagccaac
acctccaccatcgacagcggcagcccggttgaagcctctgctgctctacggcagcttaca
gaagacaaactgaaccagacccgagaggagttcttgaagagacagtctgagcatgctcaa
aaactggatgacctggcgggagagctgcagagtctggacctagcagaactcagcagcaag
acctgtggcagtccatctttgggtcaagacgcatgcgggtcttcttcctgcggtggtctg
ggctgcgtgaatcctgagggcagggccaggtgtggaggagaaggctgtagtggtgcggta
gcaacagccaacagtgtcctgaggaaggctcgggactctgaacaggaaattgtccatgcc
atggaggaagtggagaagctgtctaagatggtgtcagaagcaaagctacaggcggacaag
gccaggctgagtgctcagaacgtcctgatgaagaccaacaggaccaaacagaaagttgac
cagagcaacgaggagctgcgcagcctcatcagacacatcagagacttcctcacacaggat
gctgcagatcttgagagcatcgaacttgtggcaaacgaggttctggccatgcagatgcca
accacgccggctcagctgcagaacctgaccgacgagatccgacagaaagtgggagaactg
ggacatgtggaaaacatcctgcaggaaagtgccgatgacatccagagggccgagaagctg
ctggacgaggctcgccaagctagcgaggaggcacgtgatgtcagagactctgtggagaaa
gtgaagcaagcactggaagaagctcagagagctaagacggccgccagcagtgccatccag
caggccaccgccaacatccacaacaccagctacctgttgtcctctgtggagtcggagacg
gcagatgctgagctaaagctttcaaatgccacccagaggctgcagaagctcgaacaggat
gtgatgctgctgaaggacaaagctgcgaacgttactcttagtgccaaactgaccaatcag
gaatcagtgagcatcagaagcatggcagaggagctgaagaaggagctggacggggagctg
aaggagaagtacgccatcctggagcagcttattggtcagaagacgggaggcatggttgat
gccaagaagagggcacagtcacttcagcaggaagccaaagagctgctgctgcaggccagt
gacaagctgcagctgctgaaagatttggagaagtcatatgaagacaatgagcgtgctctg
gagcagaaggtggagcagctggtggagctggaggcagcagtgaaggggctgctgcaggag
atcagccacaaggtgaccgtctacagcacctgcgtgttctag
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integrated database retrieval system