Oreochromis aureus (blue tilapia): 116333126
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Entry
116333126 CDS
T07295
Symbol
afdna
Name
(RefSeq) afadin isoform X13
KO
K05702
afadin
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04517
IgSF CAM signaling
oau04520
Adherens junction
oau04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116333126 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116333126 (afdna)
04530 Tight junction
116333126 (afdna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
116333126
NCBI-ProteinID:
XP_031612143
Ensembl:
ENSOABG00000025822
LinkDB
All DBs
Position
LG15:19959076..20075855
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AA seq
1765 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISRPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGERQLDLDEKPLVVQLNWNKDD
REGRFVLKNENDILPKKSQSNGPEKEKDGVIQNFKRTLSKKEKKKEKRREKEFARIPDGD
DQTLSREDGDNLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFMSSDGRPDS
GGTLRIYADSLKPNIPYKTILLSTRDTADFAVVEALEKYGLEKENPKEYCIARQDDKSGK
EVILDDNECPLQIFRDWPADRGALVFQLKKRPPDYQGRKGRKGDDKGLRGKDSSLPPEKL
PYLVELSPDGSDSRDKPKLYRLQHSITEVGSDCTDDGAIQLLGPGILPHHCNLMHSEGMV
TVTPHGPDADTFVDGQRIIETTMLRSGSTIQFGSAHVFKFVDPMFDQGGKREPAIPRSRH
KSGSVPETTFDLHGDVHSGGALPTSKSSGKLDMERGMVKPMIRGEQQDSRSLDVSADRTE
LTLPASIEFRDNSEDTFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSPTYRPDMSPSE
RTHKVIAIVNKMVSMMEGVIQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDI
LAHLVQMAFKYLVHCLQADLNNYMPAFLDDPEEHNPQRPKIEDVLHTLTGAMSLLRRCRV
NAALTIQLFSQLFHFINMWLFNKLVTDTGSGLCCHYWGAILRQQLSHIEAWAEKQGLELA
ADCHLSRIVQATTLLTMDKYSMQDVQTINNTCFKLNSLQLHALMTNYHCAPDEPYIPPEL
IDHVVAVAENTADELARSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRSLPNGLQDFLEP
LLQRGFCRLTPHPRSPGTWTVHFEGADCDSHFSAADNSEMPMRKEPEVVTVTLKKHNGMG
LSIVAAKGAGQEKLGIYIKSVVKGGAADMDGRLAAGDQLLSVDGRSLVGLSQERAAELMT
RTGSVVTLEVAKQGAIYHGLATLLNQPSPMMPRASDRGREKNGKMRPKSEGFELYNSSVQ
NGSPESPQPGWDSYPEPKKMSGEDRLLKNRADHRSSPNVANQGQSPANKSVYPGGPGTKI
TSVSTGNLCADDEPSPPRPEAYPIPTQTYPREYFTIPASKSQDRVVGPGQQGPPPHWQGM
EDRDRLPMGDNIHNNSMQRINHSQEDLYPPPGSMRPDERMQPHYQHRDLDYPHRDLEYQR
GPPGGPDHWAPQPQVSSSLESSTSSQEHLNFSASSSSSNKTQNQKTGPGRWKTPNAPHAV
PPHSAQPPSRSDLPPPPPPPPAAYPEPYDPQSDLPLPPPPAAINPVTAQQAADRKKREEQ
QRWYEKEKARLEEERERKRREQERKLGQIRANPVMPVQPHNGGAMPPPHHQPPVASMAPP
QPYHPPQPQPPPPRPEKLASLPRSAVPPPASASNPAGMDTVIRELLPQQQPRTIERRDLQ
YITISKEELTSSDSLSPDPWKRDAREKAEKQQQLHIVDLLDKEIQELQAKPERTAEENDR
LRKLMLEWQFQKRLQESKQSDDEEDEEDDEDVDTVMIMQRLEAEKRARLQDEERRRKQQL
EEIRKREAEERAKQEEERRWREEERAKREAEEKRRQEEEYYARLEAERRRQHEEAERKLL
TPDEPAGFNSYTGNSSGVVGTGEVYKDPRDKWTRSQEQENSIPSDAPESLTFKERQRLFS
QGKEVSNKVKASRKLMELENELNTK
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagcagggaggaggagaggaggaaactggccgacatcatcaaccactggaac
gccaaccggctcgacctgttcgagatcagccggcccacagaggacctggagttccatggc
gtgatgaggttctacttccaggaccgggtcgccggtaactttgctaccaagtgcatcaga
gtatccagcacagcgacaacgcaggacgtcattgaaacgttagcagagaagttcagacca
gacatgaggatgctgtcctcaccaaaatactccttgtacgaggtccatgtcagtggcgag
cgtcagctggacctggacgagaagcctcttgttgtgcagctgaactggaacaaagacgac
agagaaggacgctttgtcctgaagaatgagaacgacatcctgcccaagaagagtcagagt
aatgggcctgagaaggagaaggacggtgtgatacagaacttcaagaggactctgtccaag
aaggagaagaagaaggaaaagaggagggagaaggaattcgccagaatccctgatggagac
gatcagacactgagtcgcgaggacggagataacctggcagcagaggtttataaagacatg
ccggagaccagctttaccaggacgatctccaacccagaggtggtgatgaagaggagacgc
cagcagaaactggagaaacgcatgcaggagttcatgagcagcgatgggaggccagactcg
ggaggcactttgaggatatacgctgacagtctgaagcccaatatcccgtataaaaccatc
ctcctctccacgagagacacagctgactttgctgtggtggaggctctggagaagtatgga
ctagagaaggagaaccccaaagagtactgcattgctcggcaagatgataagtcgggcaag
gaggtgattctggacgataatgagtgtccactgcagatcttcagggactggcctgctgat
agaggggcattagtgttccagttgaagaagagacctccggactaccaggggaggaaggga
aggaaaggggatgacaagggcctcagagggaaggacagctcgctgcctcctgagaaactg
ccttatctagtggagctgagcccagacggctcagactctcgggacaaacccaagctgtac
cggcttcagcacagcatcactgaggtcggctcagactgcacagacgacggagccatccag
ctgctcggtccggggattctgccccaccactgcaacctcatgcacagcgaaggcatggtg
acagtgacgccgcacggccctgacgcagacacgtttgtagacgggcagcgcattatcgag
acgacgatgttgcgttctggctccaccatccagttcggttctgctcacgtcttcaaattc
gtggacccgatgtttgaccagggagggaagagagaaccggccataccgaggagcagacac
aagtctggcagcgtaccagaaaccaccttcgaccttcacggagacgtccacagtggagga
gccctgcctaccagcaagagctcaggaaagctggacatggagagaggaatggtcaaaccc
atgatcagaggagagcagcaggacagcaggtctctggatgtttcagccgacagaacagag
ctgactcttccagccagcatagagttcagagacaactctgaagacaccttcctctctgcc
atcatcaactacaccaacagctccacagttcacttcaaactctcgcccacgtacgtcctg
tacatggcctgccgctacgtcctgtcgcccacgtaccggcccgacatgtcgccgtcagag
aggacgcacaaggtcatcgccatcgtcaacaagatggtgagcatgatggaaggagtcatc
cagaagcagaagaacattgcgggagcactggctttctggatggccaatgcctccgagcta
ctcaatttcatcaaacaggaccgagacctgagtcgcatcacgctggacgcccaggacatc
ctcgcccatctggtccagatggccttcaagtacctggtccactgtctccaggccgatctg
aacaactacatgcctgccttcctcgatgaccccgaggagcataatccacagagaccaaag
atcgaggacgtcctgcacacactgacgggggcgatgtcattactgcggcggtgtcgggtc
aacgccgctctcaccatccagcttttctcgcagctcttccacttcatcaacatgtggctg
ttcaacaagctggtgacagataccggctcggggctgtgctgtcactactggggcgccatc
ctccggcagcagctgagccacattgaggcctgggctgagaagcagggtctggagctcgct
gctgactgccacctcagccgaatcgtacaggccaccaccctgctgaccatggataaatac
tccatgcaggatgtgcagaccatcaataacacttgcttcaagctcaactccctgcagctt
cacgccctcatgaccaactaccactgtgcccccgatgagccgtacatcccgcctgagctg
atagaccacgtggtggcagtggcggaaaacacagcagatgagctggcgaggagtgacggc
agagaggttcagctcgaggaggatccagacctccagctgccctttctccttcctgaggac
ggctactcctgcgacgtggtgcgcagcctccccaatggcctgcaggacttcctggagcct
ctcctgcaaagaggtttttgtaggttaacgccacatccacgatcgcctggcacctggacc
gtccacttcgaaggagctgactgcgacagtcacttctctgctgccgacaactctgaaatg
ccaatgaggaaagagccggaggttgtcacagtaaccctgaagaagcacaacggcatgggc
ctcagcatcgtggccgccaagggtgctggtcaggagaagctgggcatctacatcaagtct
gttgtcaaaggtggagcagctgatatggatggtcgtttggcggcaggtgaccagttgttg
agtgttgatgggcggagtctagtcggcctatcgcaagaaagggcggcagagctgatgacg
aggacgggctcagtcgtcactctggaggtcgccaagcagggagccatttaccacggactg
gccacgctcctcaaccagccgagcccaatgatgccaagagcgtcagaccgaggccgtgag
aagaacgggaaaatgcgaccaaagagcgaaggcttcgagctgtacaacagctcggtgcag
aacggctctccggagagcccgcagcccggctgggactcttaccccgaaccaaagaagatg
agcggagaagaccggctcctcaagaaccgagccgaccatcgctccagccccaacgtagcc
aatcagggccagagtcctgcaaacaaatcagtgtaccccggaggacctggcaccaagatc
acctctgtctccaccgggaacctgtgtgcagacgatgagccctcccctccccgtccagag
gcctaccccatcccaactcagacatatcccagggagtacttcaccatcccagcctccaag
agccaggatcgggtggtgggaccagggcagcaggggcccccaccacactggcagggtatg
gaggacagagatcgcctccccatgggtgataacatccacaacaacagcatgcagcggatt
aatcactctcaggaggacttgtatccgccaccaggaagcatgaggccagatgagcgaatg
cagccacactaccagcaccgcgacctggactacccacacagagatctcgaataccagaga
ggtccacctggagggcccgaccactgggctccacagccacaggtgtcctcctctctggag
tcatcaacatcaagccaggagcatctcaacttctccgcgtcctcctcttcttcgaacaag
acccagaaccagaagaccggcccgggccgatggaagacgcccaacgcccctcacgccgtg
ccgccgcattcggcacagccgccatctcggtctgacctgccccctcctccacctccacct
ccagcagcttaccccgaaccctacgacccacagtcggacctaccccttccgccacctcca
gctgctatcaacccagtaacggctcagcaagctgctgaccgcaagaagagagaggagcag
cagcgctggtatgagaaggagaaggctcggcttgaggaagagagggagaggaagaggagg
gagcaggagagaaagttgggtcagatccgggccaaccctgtcatgcccgtccagcctcac
aacggaggagccatgcctcctcctcaccaccagccccctgtggcctccatggctccaccc
cagccttaccaccccccacagcctcagcctcctccacccagaccagagaagctggccagt
ctgccgcggtctgctgtacctcctcctgctagtgcctccaaccctgctggcatggacaca
gtgatcagggagctgcttccacagcagcagccgcgaaccatcgagaggcgagacctgcag
tacatcaccatcagcaaggaggagctgacgtccagcgacagtctgtctccagatccttgg
aagagagatgcccgagagaaagccgagaaacagcagcagcttcacatcgtggatctgctg
gacaaggaaatccaggagctgcaggcaaagccggagcgaacagcggaagaaaacgaccgc
ctcaggaagttgatgctggagtggcagttccagaaacgactgcaggagtccaagcagagc
gacgacgaggaggacgaggaggatgatgaagatgtggacaccgtgatgatcatgcagagg
ctggaggccgagaaaagagccaggttgcaggacgaggagcggcggcgtaagcagcagctg
gaggagattcgtaagcgggaggcagaggagcgggcgaagcaggaggaggagaggaggtgg
agggaggaggagagagccaagcgagaggccgaggagaagaggagacaggaggaggagtac
tacgctcgcctggaggccgagcggcgccggcagcacgaggaggcggagagaaagctgctg
acgcctgatgagccggccggatttaactcgtacactggaaactcatcaggagttgtagga
acaggagaagtctacaaggacccgagagacaaatggacgaggagtcaagagcaggagaac
tcgatccccagcgatgctccggagagtctgaccttcaaggagcgccagcgcctcttctct
caggggaaggaggtttccaacaaggtcaaggcttctcgcaaactcatggagctggagaac
gagctcaacaccaagtag
DBGET
integrated database retrieval system