Oreochromis aureus (blue tilapia): 116333153
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Entry
116333153 CDS
T07295
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116333153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116333153
03009 Ribosome biogenesis [BR:
oau03009
]
116333153
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116333153
Spliceosome [BR:
oau03041
]
Complex A
U2 snRNP components
U2 related factors
116333153
Complex B
116333153
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
116333153
Ribosome biogenesis [BR:
oau03009
]
Eukaryotic type
90S particles
Helicases
116333153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
116333153
NCBI-ProteinID:
XP_031612177
Ensembl:
ENSOABG00000025840
LinkDB
All DBs
Position
LG3:16779523..16806046
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AA seq
751 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGRDRDRDERSRDRDRDRDKDRDVKPSGVPTNPAAGIAG
FLKQPGIQQQINPFTNLPHTPRYYEILNKRLQLPVWEYRERFTEILMRNQSFVLVGETGS
GKTTQIPQWCVDMVRSLPGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFE
DCSSAKTVLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRP
DLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHM
CEEDEGDVLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPP
PPNKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKA
SAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVH
FDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCEFNCS
NEVLSITAMLSVPQCFVRPTEAKKVADEAKMRFAHIDGDHLTLLNVYHAFKQNHESTQWC
YDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFSSRDYYINIRRALVTGFFMQVAHL
ERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQ
YYEMSNFPQCEAKRQLERIIAKLSSKEYTQY
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgacatcgtttagatctgggtgacgattattcgtcgagtaaaaagaggtcc
tccgatgggcgcgacagagaccgtgacgagaggtcgcgggaccgcgatcgagaccgtgac
aaggacagagatgtgaagccgtccggggtgcctacgaacccggctgcaggcatcgccggc
ttccttaagcaacctggtatacagcagcagatcaaccccttcactaacctgccccacacg
ccacgctactatgagatcctcaacaagcggctgcagcttcctgtgtgggagtacagagag
cgcttcactgagatcctgatgcggaaccagtcttttgtgctggtgggagagacaggctct
ggaaagactacacagatcccccagtggtgcgtagacatggtccggtcattgccgggacca
aagagagcggtagcctgcacccagcccaggagggtagcagccatgagcgttgcccagagg
gttgcagatgagatggatgtcatgctgggccaggaggtgggctactccatcaggtttgag
gactgcagctctgccaagaccgtcctcaagtacatgacagatggaatgctgctgcgggag
gccatgaacgatcccctgctggagcgctatggtgtcatcattctggacgaggcccacgaa
cgcacattagctacagacatcctcatgggggtcctcaaggaggtggtccgccagaggcct
gacctaaaggtcatcgtcatgagcgccacactcgacgccggtaagttccaggtgtacttt
gacaactgcccactgctaaccatcccgggacgcacgcaccccgtggagattttctacaca
ccggagccagagcgggactatctggaggcggccatccgcaccgtgatccagatccacatg
tgtgaggaggatgagggggacgttttgctcttcctcactggacaagaggaaatcgacgaa
gcctgcaagcgaattaagagggaggttgacgacctggggcccgaagtcggcgatatcaaa
atcatcccgctgtactcgacgctgcctccacagcagcagcagaggatctttgagccaccc
ccgcccaataaaccaaatggtgccatcggaagaaaggtcgtcgtgtcaacaaacatcgcc
gagacgtccctgaccatcgatggggtggtgtttgtaattgatcccggatttgccaagcaa
aaggtgtataacccacgaatccgagtggaatcccttttggtcacagccatcagcaaggcc
tcagcccagcaaagggcaggccgtgccggacgtacacgcccaggaaagtgtttccggctt
tacacagagaaagcttacaagacagaaatgcaggacaacacgtatccagaaatcctgagg
tctaatctgggctccgtggtgctgcagctcaagaaactgggcattgatgacctggtgcat
ttcgacttcatggacccaccagctccagagaccctgatgcgagccctggagttgctgaac
tacctggcagcgctcaacgacgacggtgacctgaccgagctgggctccatgatggcagag
ttccccctggacccccagctggccaagatggtcatcgccagctgtgaattcaactgttcc
aacgaggtcctctccatcactgccatgttgtcagtcccacagtgctttgtgcgacccacg
gaggccaagaaggtggctgacgaggccaagatgcgcttcgcccacatcgacggagaccac
ctaacgttgctcaacgtctaccatgcctttaaacagaaccacgagtccactcaatggtgc
tatgacaattttgtcaactaccgctcgctgatgtcagcagataacgtacggcagcagctg
tccaggatcatggaccgcttcagcctaccgcgaaggagcacggagttcagcagcagagac
tactacatcaacatccgccgagcactggtcacaggctttttcatgcaggttgctcacctg
gagcgcacaggccactacctgaccgtgaaggacaaccaagtcgtacagctgcacccctcc
accgtgctggaccacaaaccggagtgggtgctttacaacgagtttgtgctcaccaccaag
aattacatccgcacctgcacagacatcaaacccgagtggctggtgaaaattgccccgcag
tactacgagatgagtaacttcccccagtgtgaagctaagagacagttggagcgtatcatt
gcaaaactctcatccaaggaatacactcagtactaa
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