Oreochromis aureus (blue tilapia): 116333158 Help Entry 116333158         CDS       T07295                                  Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism oau  Oreochromis aureus (blue tilapia) Pathway oau04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oau00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     116333158  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:oau04990]     116333158 Domain-containing proteins not elsewhere classified [BR:oau04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    116333158 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PDZ PDZ_6 Pept_S41_N_bact PDZ_2 Motif Other DBs NCBI-GeneID:  116333158 NCBI-ProteinID:  XP_031612186 Ensembl:  ENSOABG00000025848 LinkDB All DBs Position LG3 Genome browser AA seq 1557 aa AA seqDB search MGTGDYICVTLRGGAPWGFTLREGEGDTHRPLLVSQVEEGGRASLAGVQDGDEVVSINGE PCADLTLLRAFALIDTSIDCLQLLVRRYHSIPTEDYESDEMQSSERASAGETLESTTLHI FPPKQTSQIPNPESPDETYSKEFNINTEFSKEGQLLCTQLHVPSSKEEDDKVQRCFSPGD MVELQVSLSEQTLDDVGCASLGSARGIDGDLSNREAVEAVHITSAATALRSVREPLSHHG VVLNSPLMLGQVEVILEASGVGRGLQSGGGTQDRETVGSQSEGEEEDCSPAEEQDSDSEG VQDKPNKHRARHARLRRNESISEKQLKEAKSKCKRIALLLTAAPTNPNNKGLLMFKKHRQ RAKKFTLVSYGTGEDEPEYSDEEYEENLDSRQETFILVAPNESEIDKPFLTSTHSGKSVL TLTLDKGLLEIERNLKNQAEMESLPETKGKGALMFAQRRQRMDEISAEHEELRRQGIPVE AVQEAEKKIVEHSYMQSAAEGRSYMDVNVHQQTQQQYQQFQEQQYYEQQQNYQQQQQQQY QQQYQQQYQQQQYEQSHYQQQQMYHQQQEYHQEQQKMQQYSATVNGTVQHQTNEMQSSFS NRTAKPFSADNMAPTPYSHAMSGTNQDSVGQGEQIATRDERISTPAIRTGLLLDSKKKNA AKPMFTFKEAPKVSPNPALLNLLNKGDKKPGFESGPEDDYLSLGAEACNFLQSQRVKHKI PPPVAPKPVINPNSPPWSSQIEATNQEMPQCAENSLSTPAAAPTAETTPAPQLAPTPAPA PESSPPAAPQENPGSTNKEEQHTWPLPEPKSQQQPTQAVAQEANGHMNSTLQSESSAVTT WGAAQTQVQQQLSSSSWHSAQVQPSDPPPRQSSPHPPWVSHQPTQNQAQQPPTSTWTPQI QQSWTQPPEQSQAQAHVQPSWAQSREQPQSQPQVHPPWAHSTEQPHLQQMQPNWSQAQEQ MQPQHQNQWTQPSQTDSQHQPAWMQQPHKKSQAQTPWVQGVQPESQPQPPWVQQAQHQAP PQLWPQTEAPGQPQPPWVSAQPQQQQLPSVNAWAPSQTQPQAQPPWIQVAQPQPQAQPQA NLNPWAPVPAQTQSQPPWAQHPPEHGQHHISSWTQEQDQAHHQSPWAQPVPAQPAPQPKW QQPTSKSPPQPPMNTWQPAQTQPQTPVNAWTPQSQQKPVNISTLTVNTRPSPKPWQPPQN APQSRSPPTPPQRMHSFTIGQRVSSPINPMATVLNPSSQGSAFEMPAVKGKGADMFAKRQ SRMEKYIVDSETVEANKASRSTSPAASLPNEWKYTPNVRAPPPRAYNPIQSPFYPPAATK QPPSSSPSTKAKKKDKAKQMPAPKPLNVIDVMKHQPYQLNSSLFIFGPAAEATKPSAPKT SCSPPNPPDDNQPIRYEQMPPVQPAGPFGAPYPQQTYEMPMQPMMHDSQYQQIQPNVYPP SNPYQQPPSCPYQQVYNQQYQQPAPPAYHPQAPQSPNSPYQHSVQAGYQPANSPPYLAAP SVPYQPQPLSSYIAPSFPVGARPESASCGNPGVAPKPKFTANKSSAQVWKPTAVDKE NT seq 4674 nt NT seq  +upstreamnt  +downstreamnt atgggcaccggggattacatctgcgtaacgctgcgcggtggtgcgccctggggattcacc ctgcgagagggagaaggggacacccacagacctcttctagtttcccaggtagaggagggt ggtcgtgcctccctggctggagtacaggatggagatgaggtggtgtcaatcaacggggag ccgtgtgctgacctcacccttttacgagcgtttgcgctaatcgacacatcaatcgactgt ctgcagctgctagtcagaagataccactccatccccactgaagactatgaatcagatgaa atgcaaagcagtgagagggcctctgctggtgagactttagagagcaccacccttcacatc ttccccccaaagcaaacatcccaaatcccaaatcctgaatccccggatgagacctacagc aaagagtttaatatcaacacagagttttccaaggaaggccagctgctttgcactcagcta catgttccctcatctaaggaagaagatgataaagtacagcggtgcttctcaccaggggac atggtggagctccaggtgtccctgtctgagcaaaccttggatgatgtgggctgtgcctcg ctcggaagtgctcgtgggattgatggggacctctcaaaccgggaggctgtggaggctgtc catatcaccagtgctgccactgcattgcgctccgtcagggagccgctaagccatcatgga gtggttctcaactcccctttaatgctggggcaggtggaggtcattttggaggcatcagga gtagggaggggcctccagagtggaggtggcactcaggacagggaaacagttggttctcaa agtgaaggagaagaagaggactgcagtcctgcagaagagcaggactctgattctgaagga gttcaagacaaacccaacaagcatcgggctaggcatgccaggctcaggcgcaacgagagc atttcagagaaacagctaaaggaagccaagtccaaatgtaaacgaattgcccttcttctt acggctgctccgaccaaccccaataacaaggggctgttgatgttcaagaagcatcgtcag agagctaagaaattcacgctcgtgagctacggcacaggagaagacgagccagagtacagc gacgaggagtacgaggaaaacctggacagcagacaagaaacctttatccttgtggcccca aacgagtctgaaatagataagccttttctcactagcacccacagtggcaaaagtgtgcta actttgaccttggacaagggtcttcttgaaatcgaaaggaatttgaagaaccaagcagag atggaatctttgcctgaaaccaaaggcaagggtgcgctgatgtttgcccagcgtcgccag aggatggatgagatttctgccgaacacgaggagcttaggcgccaagggatccccgttgaa gcagtgcaagaggctgaaaagaaaatagtggagcattcctacatgcagtccgctgcagaa ggccgcagttacatggatgtaaacgtgcaccagcaaacccagcaacagtaccagcagttt caagaacaacagtactatgagcaacagcagaactaccaacaacaacaacaacaacaatat cagcaacaatatcagcagcaatatcagcaacagcaatatgagcaaagtcactatcagcaa cagcaaatgtatcaccagcagcaagaatatcatcaggagcaacaaaaaatgcagcagtat tcagcaactgtcaatggcacagtccaacatcaaacaaatgaaatgcagagctctttcagc aatcgtactgcaaagcctttctcagcagacaacatggcgcccaccccttattctcatgca atgagtgggaccaatcaagattctgtgggtcaaggggagcagattgctacccgtgatgag cgcatttctactcctgcaatcaggacgggccttttgttggattcgaagaaaaagaatgca gccaagcctatgttcacatttaaggaagccccaaaagtatccccaaacccagcattgctg aacctcctaaacaaaggtgataaaaagcccgggtttgaatcaggacctgaggatgactat cttagtcttggagctgaggcttgtaatttccttcagtctcagcgtgtcaaacacaagatt cctccaccagttgccccaaagcctgtgatcaatcccaactcacctccttggtcctcgcag atagaagcaaccaaccaggagatgcctcagtgtgctgaaaatagtctatccacacctgct gcagcccccaccgcagagactactcctgctccacaactagcgccaacccctgcacctgcc cctgagtcttctccccctgctgcaccccaggagaatcctggcagtaccaacaaagaggaa cagcacacatggccgctcccagaacccaaatctcaacaacagcccacacaagctgtagct caagaggcaaatggtcatatgaattctacactgcagtctgagtcgtctgctgtgactacc tggggtgcagctcaaacacaagtgcaacaacagttatcttcaagttcttggcattcagct caagtgcagccctcagacccacctccaagacagtcctcacctcacccaccttgggtatca catcagcctactcagaaccaggcacagcaacctcccacaagtacttggacccctcaaatt cagcagtcctggacgcagcctccagagcaatcacaagcccaagcacatgttcagccatcc tgggcccagtcacgagagcaaccccagtctcagccgcaggttcacccaccttgggcacac tctactgagcagccacatctacagcaaatgcagcccaactggagtcaagcccaagaacaa atgcagccacaacaccagaaccaatggacacagccatcacaaacagactctcaacatcaa ccagcatggatgcaacaacctcataaaaaatcccaagcacaaactccttgggttcaaggg gtacaaccagaatcccagccacagccgccatgggttcagcaagcacaacatcaggctcct ccacaattatggccacagactgaagcaccaggtcagcctcaaccaccttgggtatcagct cagccacaacagcaacagctaccctcagtgaatgcatgggccccatcacaaactcaaccc caagctcagccaccctggatccaagtagctcaaccacaacctcaagcacagcctcaagcc aatttaaatccatgggcgccagtacctgcccagactcagtctcagcctccatgggctcaa caccccccagagcacggtcaacaccacataagttcttggactcaagagcaagatcaggcc caccatcagtctccatgggctcaacctgttccagcccagccagcaccacagccaaagtgg caacagcctacatcaaagagtccaccacaaccaccaatgaacacatggcaaccagctcag acacagcctcagacacctgtgaatgcctggactccacaatcacagcaaaaacctgtgaat atttccacactgacagtgaacactcgcccctctccaaaaccttggcaaccaccacaaaat gctccacaaagccgatcccctcctactccgccacagcgaatgcactctttcactattggt caaagagtttcatcgcccatcaacccaatggccactgtcttaaacccatcctcccagggt tcagcatttgagatgccagctgttaaaggaaaaggagctgatatgtttgcaaagaggcag tctcgaatggagaagtacatcgtggactctgagacggtggaagcaaataaggcaagcagg tcaacatcaccagcagcttccttaccaaatgagtggaaatacactcccaatgtacgtgct ccacctccacgtgcatataaccctattcaatcacctttttatcccccagcagcaacaaag caacccccttcaagtagcccctcaaccaaagcaaagaaaaaagacaaagcgaaacagatg cctgcccctaaacctctcaatgtaatagatgtcatgaaacatcaaccctatcaactaaat tcctcactctttatctttggtccagcagcagaggctaccaagccttccgcacctaagacc agctgttcgcctcctaatccacctgatgataaccaaccaatcagatatgagcaaatgccc ccggtccagccagctggaccatttggtgccccatacccccaacaaacctatgagatgcca atgcagcctatgatgcacgatagccagtatcagcagatccaaccaaatgtttatcccccc tctaatccttatcagcaacctcctagttgtccataccagcaagtatataaccaacagtat caacaacctgctccacctgcttatcatccccaagcccctcagtctccaaactctccctac caacactcggtgcaagctggttaccagccagccaatagccctccctatcttgcagctcct tcagtgccctaccagccacagcctcttagtagctatattgctcccagtttccctgtgggt gctaggcccgagtctgcatcttgtggtaaccctggagtggctcccaagcctaagtttaca gctaataagagttcagctcaggtgtggaagcctacagcagttgataaagagtga

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