Oreochromis aureus (blue tilapia): 116333355
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Entry
116333355 CDS
T07295
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116333355 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116333355 (smarca2)
03036 Chromosome and associated proteins [BR:
oau03036
]
116333355 (smarca2)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116333355 (smarca2)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116333355 (smarca2)
Chromatin remodeling factors
BAF complex
116333355 (smarca2)
PBAF complex
116333355 (smarca2)
GBAF(ncBAF) complex
116333355 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
116333355
NCBI-ProteinID:
XP_031612434
Ensembl:
ENSOABG00000016615
LinkDB
All DBs
Position
LG12:3123925..3182732
Genome browser
AA seq
1591 aa
AA seq
DB search
MSGPSETSGGMSHPGPSPGAGMSPGPILGPSPGPDPSPSSVHSMMGPSPGPGTPNAPHGM
QGQGQSDYSQDSMYSMHKPMEGMNDKSMAEAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMSGGGGGPTPPHMPPAQSGPMMSMDPQGGMSSMSNMGQQV
RGSSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQPQQQPQ
PQPQAPSASPYSRPPGMPMAPMGGPQSSPCPAPAMQVHNQSTGPKPWTDGQCPENQTIAQ
KQLTPVASGRPSPAPPQASAVPAGPMPGSSGTPQPPGQQGSVMLPIQHKQNRITPIQKPQ
GLDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQD
VVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSI
LQHAKDFKEYHRSVSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYR
KLIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAREKKRRRKRKKKVDGDGEGTSA
IGPDGEPMDESSQMSELPVKVIQTETGKVLQGTEAPKSSQLEAWLEMNPGYEVAPRSDSE
ESGSEFEEEEEEEASKGETEEKKIIDPNGDEVTKRAAKNIIESAKQDVDDEYSVPTGQTS
SQSYYGVAHAVIERVEKQSSLLINGMLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTI
QTIALITYLMEHKRLNGPYLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVPQ
LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRL
LLTGTPLQNKLPELWALLNFLLPTIFKCCSTFEQWFNAPFAMTGERVDLNEEETILIIRR
LHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKG
KGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIISGPDLYRASGKFELLDRI
LPKLQATNHRVLLFCQMTSLMTIMEDYFGYRNFQYLRLDGTTKSEDRAALLKKFNEEGSQ
YFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN
SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDET
LNQMIARNEDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEE
EEEKMFGRGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSGR
EDGGAKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYRDGSGRQLSEVFVQLPSRKE
LPEYYELIRKPVDFKKIKERVRNHKYRNVGDLEKDVMLLCQNAQTFNLEGSQIYEDSIVL
QSVFKSARQKIAKDDDSDDDSDEEEEDDDDDSEAEAKSVRVKIKLSREARGHDKGKKRQS
RGKAKPVVSDDDSDEDQDDNDQSDKSKSDDE
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcccctcagagacatcaggtggtatgtcgcatcctggcccttcacctggggcg
ggtatgtccccagggcccatcttgggccccagccctggaccagatccctcaccgagctct
gttcacagcatgatgggccccagccctggaccgggaacacccaatgcacctcatggcatg
cagggccagggacaaagtgattactctcaggacagcatgtattctatgcataagcccatg
gaggggatgaatgacaagtcaatggcagaggcaatgcactttggtcacatgaaaggtgtg
gggatgaggtctctccatagtggcatggggcctccacagagtcctatggaccagcacagc
caagggtacatgtctccccacccatccccaatgggagtccatgagcacgcttcaagtccc
atgtcaggaggcggaggtggacctacacctccacacatgccacctgcccagtcaggccct
atgatgtcaatggatccccaaggaggcatgtccagcatgtccaacatgggccagcaggtg
agggggtcgtctgcttttagtccagtacagctgcagcagctcagagctcagattctggcc
tacaagattctgggtcgtgggcagccactaccggaaaaccttcagctggctgttcaaggt
aaaaggagcctacccacaatgcaacagcagcagcagcagcagccacaacaacagccacag
ccgcagccgcaggcaccaagtgccagtccttacagcaggcctccaggtatgccaatggca
cctatggggggtccccagtcgagtccctgcccagccccggccatgcaagtacacaatcaa
agcacaggacccaagccttggactgatggccagtgtcctgaaaatcaaaccattgcacag
aagcagctcactcctgttgctagtggtcgcccatctcctgcaccacctcaggcctctgct
gtgccagctgggcccatgccaggcagttcggggacccctcagcctcctgggcagcagggg
tccgtaatgctcccgatacagcacaagcagaaccgcatcacgcctatccagaagccccag
ggcttggacccagtgggaatcctgcaggagagagaatacaggctgcaggctcggattgca
catcgaatccaggaactggaaagtctgccaggctcgctgcctccggacctcaggactaaa
gccacagtggagctcaaggctctgcgtctgctcaacttccagcgacagctgaggcaggac
gtcgtggcctgtatgagacgagacacgaccctggagacggccctcaactcaaaggcttac
cggcgtagtaagcggcagacgctgagggaggcacgcatgaccgagaagctggagaagcag
cagaagctcgagcaggaaaagaagcgcaggcagaaacatcaggaatatctcaacagcatc
ctccaacatgccaaggacttcaaagagtatcaccgctcagtgtccggtaagatgcagaag
ctcaccagagccatcgccacctggcacaccaacacggagcgtgagcagaagaaggagacg
gagagaatcgagaaggagaggatgaggagactcatggcagaagacgaggaagggtaccga
aaactaatcgatcaaaagaaagacaagcgtctggcctacttgctgcagcagacggatgaa
tatgtggccaacctcaccaccctggtgtatgaacacaaagctgctcaggctgccagggag
aagaagaggagacggaagagaaagaagaaggtggatggcgatggtgaaggcacgagcgca
attgggcctgatggagagccaatggatgaaagcagccagatgagtgagctgcctgtcaaa
gtgattcagactgagaccgggaaagttttgcagggaaccgaggccccaaaatccagccaa
ctggaggcttggctcgagatgaaccccgggtatgaagtggccccgcggtcagacagcgag
gagagcggctcagagtttgaagaggaggaggaagaggaggcgtccaaaggagagacagag
gagaagaagataatcgatcccaacggagatgaagtcaccaagagagctgccaagaacatc
atcgagtcagccaagcaggatgtggatgatgagtacagtgttcctactggccaaaccagc
tcccagtcttactacggcgtggcccacgctgtcattgagagggtggagaagcagtcgtca
ctgttgatcaatgggatgctcaaacagtaccagattcaggggctcgagtggatggtgtcc
ttgtacaacaacaatctcaacggcatcttggctgatgaaatggggctcggcaaaaccatc
caaaccatcgcccttatcacctacctgatggagcacaagaggctcaatggtccctatctc
atcatcgttcctctctcgaccttgtctaactgggtctatgagcttgacaaatgggcaccg
tctgtggttaaaattgcttacaagggcactcctgctttgcgtcgtgggcttgtgccgcag
ctccgcagcgggaagttcaacgtcttgctgaccacctatgaatacatcatcaaagacaag
catatactggctaagatccgctggaagtacatgatcgttgacgagggtcaccgcatgaag
aaccaccactgtaaactgacacaggtgctgaacacgcactacgtggctccccgtcggctg
ctcctcaccgggactcctctgcagaacaagctgcccgagctgtgggccctgctcaacttc
ctgctgcccaccatcttcaagtgctgcagcaccttcgagcagtggtttaacgcacccttt
gccatgacaggagagagggttgacttaaacgaggaggaaactatcttgatcatccggcgt
ctgcacaaagtgctccgcccgtttctcctgcgccggctgaagaaagaggtggagtctcag
ctgccagagaaggtggagtacgtcataaagtgtgacatgtctgccatacagaaggttctg
taccgccacatgcagaaaggcatcctcctcactgacggctcagagaaagacaagaagggc
aaaggtggagcaaagaccttaatgaacaccatcatgcagctgaagaagatctgcaaccat
ccgtacatgttccagcacattgaagaatcctttgctgagcacttgggctatccaaacggc
atcatcagtgggcctgatctgtatagagcatctgggaagtttgagctcctagatcgcatc
ctaccgaagctccaggccaccaaccacagagtgctgctgttctgccagatgacctctctc
atgaccatcatggaggactatttcggataccgcaactttcagtacttgcgtcttgatgga
accaccaagtccgaggaccgagcagcactgctgaagaaattcaatgaggaaggctctcag
tacttcatcttcctcctgagtaccagagctggtggcctcggcctcaacctgcaggctgct
gacactgtggtcatcttcgacagtgactggaacccacaccaggaccttcaggctcaggac
cgggctcaccgcatcggtcagcagaacgaggtgcgcgtgcttcgtctctgcactgtcaac
agcgtcgaagagaaaatcttggctgctgccaaatacaaactgaacgttgatcagaaggtc
atccaggccggcatgtttgaccagaagtcgtcgagccacgagcgccgcgcctttctccag
gccatcttggagcacgaggagcagaacgaggaggaagatgaggtgcctgatgatgaaact
ctgaaccagatgatagcccgcaatgaggatgaatttgagctcttcatgcgcatggacatg
gaccggcgcagggaggatgctaggaacccaaagcgtaagcctcgcctaatggaggaggac
gagctgccttcttggatcatcaaagatgacgccgaagtggagcggctcacctacgaagag
gaggaggagaagatgtttggtcgagggtctcgctgccgtcgggacgtggactacagcgac
acgctgactgaaaaacagtggctgcgggcgattgaagatggaaacctggaggagatggag
gaggagatccggctgaaaaaacgcaaacgcaaaagacgtcaggacaaggactccggcaga
gaggacggaggcgcaaaggccaagaagagacgtggacgaccgccagcagagaagctgtcc
cccaacccgcccaaactcaccaagcaaatgaacgccatcattgatacagtgatcaactac
agagacggctctggaaggcaactcagtgaggtgtttgtccagcttccatccaggaaggaa
ctcccagaatattacgagctgatccggaaacctgtggacttcaaaaaaatcaaggaacgt
gtgagaaaccataaatacaggaatgtgggggacctggagaaggacgtgatgctgctctgt
caaaacgcacagaccttcaacttggagggatcccagatatacgaggactccatcgttctt
cagtctgttttcaagagcgccagacagaagatcgccaaggacgatgacagcgatgatgac
agtgacgaggaggaggaggacgacgacgatgactcagaggccgaggccaagtcagtgcgg
gtaaagatcaagctgagcagggaggcacgcggccacgacaaaggcaagaagaggcagagc
cgagggaaggccaagccggtggtcagcgacgacgacagcgacgaggaccaggatgataat
gatcaatcagacaagagcaaaagtgatgacgagtga
DBGET
integrated database retrieval system
