Oreochromis aureus (blue tilapia): 116333430
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Entry
116333430 CDS
T07295
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116333430 (prdm1a)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116333430 (prdm1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
FOG1-like_PR
B129_C2H2-zf
DUF3602
Motif
Other DBs
NCBI-GeneID:
116333430
NCBI-ProteinID:
XP_031612525
Ensembl:
ENSOABG00000020582
UniProt:
A0A668V4W4
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All DBs
Position
LG11:complement(30374232..30388790)
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AA seq
848 aa
AA seq
DB search
MCGWDQSYTATSHSSAMLTSEGAHTMEQDDARHGAKMASSATSTGSGGAGTMTDTDVDME
EADMTQWTEAEFEEKCTYIVKDTACEVGPDGDAMMMSTTRAEASLPRNLAFKHLAGSKEV
AGVCSREYIPKGTRFGPLVGEIYTADSVPKDANRKYFWRIYVDGEFHHFVDGLDETRSNW
MRYVNPAHSAAEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCHDFARRLHYPPSGELMM
QKLKQSILEVKQQQVSNEEHVQETSSPSPVAVTPTPPKKEHSVLSILRGTSSSSSTKREP
NRPLPTRPRCADSPDRLLYPRALYPPLRPHPQISEDFLNHKAARLAYPSTHSPGNQSSAT
PSPSARSSPESSPHGSPSGAAPSPASFYPTGLGTYPGYSPPSAPLSSPFYPPGAPYSRYL
MPHHYPLPGGGIPTVGAIFPRMYPLYSNLLPHHVPLLPSETGRRFLIPDPVHPSSISGHR
DFLLPGPTSAFSAATSLRDTTGPHSTYPRHPHSHGSAHAPSSGSPTAGTAPPSEQVPTKP
TSALLGNTSERCPDDEAINLTKVKRGAGSAGYKALPYPLKKQNGKIKYECNVCSKTFGQL
SNLKVHLRVHSGERPFKCQTCSKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLK
THLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLRLHLK
GYCLAASSSSGSPAISSQIALEEVHRANEEIERFDVSEHAERLEQLQGGVEMEAMLEKQV
LGMLWRETDIKSSHFHPHHKSNATELRSAGYGAYESPNETSVIKMRHSSPIPPLPANITV
KQESEDHA
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccagagttatacagcgacctctcatagctcggccatgttgaccagt
gagggggcgcacaccatggagcaggacgacgcacgccacggagccaagatggcttcctct
gcaaccagcacaggctcaggtggagcgggcacgatgacagataccgacgtcgacatggag
gaagcagacatgacacagtggacagaggcagagtttgaggagaagtgcacgtatattgtc
aaagacacggcatgtgaggtgggcccagacggtgatgccatgatgatgtcgacgaccaga
gccgaggcttcgctaccccgtaacttggccttcaaacacctggctggcagcaaggaggtg
gctggcgtgtgcagcagggagtacatccccaaaggaactcgcttcggtcccctggtgggc
gagatctacacggctgacagcgtccccaaagacgccaaccgcaaatacttttggaggatt
tatgtcgatggggagtttcatcactttgtcgatggcctggatgagactcgctccaactgg
atgcggtatgtgaacccggcccactcggcagcagagcagaacctggcggcgtgtcagaat
ggcatggagatttacttctatactgtgaagcctgtcccagctggtgccgagctgcttgtc
tggtactgccacgactttgcccgacgcctgcactacccaccgtctggggagctgatgatg
cagaaacttaagcagtctattttggaggtaaagcagcagcaggtgagcaatgaggagcat
gtgcaagaaacatccagcccgtcccctgtcgcagtgacccccaccccaccaaagaaagaa
cacagtgtcctttccattttgcgtggcacctcatcttcatcgtccacaaagagggagccc
aaccggccgcttcccacacgtccacgctgtgccgacagccccgatcgtctcctatacccc
cgtgccctctacccacctctcaggccccaccctcaaatatctgaggacttcctcaatcac
aaagctgcccgccttgcttacccttcaactcactcgcctggcaaccagtcctcagccaca
cctagcccatcagcaaggagcagcccagagagcagccctcacgggagcccctctggtgca
gcaccatcgcctgcttctttctatcccaccggactgggaacctatcctggttattcccca
ccatctgcccccctctcctctcccttctaccctccaggggccccttactcacgttacctt
atgccccatcactatcctctccctggtggtggcattcctactgtaggagcaatctttccc
aggatgtatcccctctacagcaacctcctgccccatcatgtacccctcctgccttctgaa
acagggaggcgcttccttatacctgaccctgtgcatccctcctccatttctggccacaga
gacttcctccttccagggcccacaagtgccttctcagctgctacttctctgagagacaca
acaggtcctcacagcacttatcccaggcaccctcactctcatggttcagcccacgctccc
tccagcggctccccgactgcaggcacagcacctcccagtgagcaggtgcccactaagcct
acctcagccctgctgggcaacaccagtgagcgttgtcccgatgatgaggcaattaacctg
accaaggtgaagcgtggtgcaggctcagcaggctacaaggcactgccttaccctctgaag
aagcagaatggcaaaatcaaatacgagtgcaacgtgtgcagcaagaccttcggacagctg
tcaaacctgaaggttcatcttcgcgtccacagtggggagagacctttcaaatgtcaaacc
tgtagcaaaggcttcacccagctggctcacctgcagaaacactacctggtccacactggg
gagaagccacatgaatgtcaggtttgtcacaagcgcttcagcagcaccagcaacctgaaa
actcacttgcgccttcactcaggggagaagccctaccactgcaaactctgtcctgctaag
ttcacccagtttgtccaccttaagctgcacaagcgcctgcactcccgcgagcgtccacac
aaatgcccccactgccatcgccactacatccacctgtgtagcctgcgacttcacctgaag
ggctattgtttggctgcaagctccagctctggaagcccagccatttcaagccagattgcc
ttggaggaagtgcaccgcgccaatgaggagattgagcgctttgacgtcagcgaacacgct
gagcgactggagcagttgcagggaggggtggagatggaagccatgttggagaagcaggtt
ttggggatgctgtggagggagactgacattaagtcctcccacttccatccccaccacaag
agtaacgccactgagcttcggtctgcaggttatggtgcgtacgagtccccaaacgagacg
tcggtcatcaagatgcggcacagcagtcccatccccccacttcctgccaacataactgtc
aagcaggaatcagaggatcacgcttaa
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