KEGG   Oreochromis aureus (blue tilapia): 116333430
Entry
116333430         CDS       T07295                                 
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
  KO
K24501  PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
oau  Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:oau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oau03000]
    116333430 (prdm1a)
Transcription factors [BR:oau03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    116333430 (prdm1a)
SSDB
Motif
Pfam: PRDM2_PR zf-H2C2_2 zf-C2H2 SET zf-C2H2_4 C2CH-3rd_BIRD-IDD Zf-C2H2_ZNF451_C zf-C2H2_6 zf-C2H2_jaz zf-met zf-C2HE FOG1-like_PR B129_C2H2-zf DUF3602
Other DBs
NCBI-GeneID: 116333430
NCBI-ProteinID: XP_031612525
Ensembl: ENSOABG00000020582
UniProt: A0A668V4W4
LinkDB
Position
LG11:complement(30374232..30388790)
AA seq 848 aa
MCGWDQSYTATSHSSAMLTSEGAHTMEQDDARHGAKMASSATSTGSGGAGTMTDTDVDME
EADMTQWTEAEFEEKCTYIVKDTACEVGPDGDAMMMSTTRAEASLPRNLAFKHLAGSKEV
AGVCSREYIPKGTRFGPLVGEIYTADSVPKDANRKYFWRIYVDGEFHHFVDGLDETRSNW
MRYVNPAHSAAEQNLAACQNGMEIYFYTVKPVPAGAELLVWYCHDFARRLHYPPSGELMM
QKLKQSILEVKQQQVSNEEHVQETSSPSPVAVTPTPPKKEHSVLSILRGTSSSSSTKREP
NRPLPTRPRCADSPDRLLYPRALYPPLRPHPQISEDFLNHKAARLAYPSTHSPGNQSSAT
PSPSARSSPESSPHGSPSGAAPSPASFYPTGLGTYPGYSPPSAPLSSPFYPPGAPYSRYL
MPHHYPLPGGGIPTVGAIFPRMYPLYSNLLPHHVPLLPSETGRRFLIPDPVHPSSISGHR
DFLLPGPTSAFSAATSLRDTTGPHSTYPRHPHSHGSAHAPSSGSPTAGTAPPSEQVPTKP
TSALLGNTSERCPDDEAINLTKVKRGAGSAGYKALPYPLKKQNGKIKYECNVCSKTFGQL
SNLKVHLRVHSGERPFKCQTCSKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLK
THLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCPHCHRHYIHLCSLRLHLK
GYCLAASSSSGSPAISSQIALEEVHRANEEIERFDVSEHAERLEQLQGGVEMEAMLEKQV
LGMLWRETDIKSSHFHPHHKSNATELRSAGYGAYESPNETSVIKMRHSSPIPPLPANITV
KQESEDHA
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgtgtggatgggaccagagttatacagcgacctctcatagctcggccatgttgaccagt
gagggggcgcacaccatggagcaggacgacgcacgccacggagccaagatggcttcctct
gcaaccagcacaggctcaggtggagcgggcacgatgacagataccgacgtcgacatggag
gaagcagacatgacacagtggacagaggcagagtttgaggagaagtgcacgtatattgtc
aaagacacggcatgtgaggtgggcccagacggtgatgccatgatgatgtcgacgaccaga
gccgaggcttcgctaccccgtaacttggccttcaaacacctggctggcagcaaggaggtg
gctggcgtgtgcagcagggagtacatccccaaaggaactcgcttcggtcccctggtgggc
gagatctacacggctgacagcgtccccaaagacgccaaccgcaaatacttttggaggatt
tatgtcgatggggagtttcatcactttgtcgatggcctggatgagactcgctccaactgg
atgcggtatgtgaacccggcccactcggcagcagagcagaacctggcggcgtgtcagaat
ggcatggagatttacttctatactgtgaagcctgtcccagctggtgccgagctgcttgtc
tggtactgccacgactttgcccgacgcctgcactacccaccgtctggggagctgatgatg
cagaaacttaagcagtctattttggaggtaaagcagcagcaggtgagcaatgaggagcat
gtgcaagaaacatccagcccgtcccctgtcgcagtgacccccaccccaccaaagaaagaa
cacagtgtcctttccattttgcgtggcacctcatcttcatcgtccacaaagagggagccc
aaccggccgcttcccacacgtccacgctgtgccgacagccccgatcgtctcctatacccc
cgtgccctctacccacctctcaggccccaccctcaaatatctgaggacttcctcaatcac
aaagctgcccgccttgcttacccttcaactcactcgcctggcaaccagtcctcagccaca
cctagcccatcagcaaggagcagcccagagagcagccctcacgggagcccctctggtgca
gcaccatcgcctgcttctttctatcccaccggactgggaacctatcctggttattcccca
ccatctgcccccctctcctctcccttctaccctccaggggccccttactcacgttacctt
atgccccatcactatcctctccctggtggtggcattcctactgtaggagcaatctttccc
aggatgtatcccctctacagcaacctcctgccccatcatgtacccctcctgccttctgaa
acagggaggcgcttccttatacctgaccctgtgcatccctcctccatttctggccacaga
gacttcctccttccagggcccacaagtgccttctcagctgctacttctctgagagacaca
acaggtcctcacagcacttatcccaggcaccctcactctcatggttcagcccacgctccc
tccagcggctccccgactgcaggcacagcacctcccagtgagcaggtgcccactaagcct
acctcagccctgctgggcaacaccagtgagcgttgtcccgatgatgaggcaattaacctg
accaaggtgaagcgtggtgcaggctcagcaggctacaaggcactgccttaccctctgaag
aagcagaatggcaaaatcaaatacgagtgcaacgtgtgcagcaagaccttcggacagctg
tcaaacctgaaggttcatcttcgcgtccacagtggggagagacctttcaaatgtcaaacc
tgtagcaaaggcttcacccagctggctcacctgcagaaacactacctggtccacactggg
gagaagccacatgaatgtcaggtttgtcacaagcgcttcagcagcaccagcaacctgaaa
actcacttgcgccttcactcaggggagaagccctaccactgcaaactctgtcctgctaag
ttcacccagtttgtccaccttaagctgcacaagcgcctgcactcccgcgagcgtccacac
aaatgcccccactgccatcgccactacatccacctgtgtagcctgcgacttcacctgaag
ggctattgtttggctgcaagctccagctctggaagcccagccatttcaagccagattgcc
ttggaggaagtgcaccgcgccaatgaggagattgagcgctttgacgtcagcgaacacgct
gagcgactggagcagttgcagggaggggtggagatggaagccatgttggagaagcaggtt
ttggggatgctgtggagggagactgacattaagtcctcccacttccatccccaccacaag
agtaacgccactgagcttcggtctgcaggttatggtgcgtacgagtccccaaacgagacg
tcggtcatcaagatgcggcacagcagtcccatccccccacttcctgccaacataactgtc
aagcaggaatcagaggatcacgcttaa

DBGET integrated database retrieval system