KEGG   Oreochromis aureus (blue tilapia): 116333995
Entry
116333995         CDS       T07295                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116333995 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oau03009]
    116333995 (wdr43)
Ribosome biogenesis [BR:oau03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    116333995 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Utp12 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_VPS8 EIF3I Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 PEP5_VPS11_N Beta-prop_NUP159_NUP214 Beta-prop_SCAP Paf1 Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_IP5PC_F Tricorn_2nd SGL Kelch_2
Other DBs
NCBI-GeneID: 116333995
NCBI-ProteinID: XP_031613140
Ensembl: ENSOABG00000023716
LinkDB
Position
LG19
AA seq 654 aa
MAADGGSSSLQLPCVFSPKSRQFLALCAQDGRLRIWNTDSKTLHQEYVPSAHLSATCTCI
AWGPCRTVKEGPQRKKRKSEAVQVEEKADLLAMGTAAGTVLIYSTAKGALHCTLDGAHSG
GVNCVQWHPEESLLYSGSDDTNIVEWDLQTGKTRSKWKADRAAVTSLCVSPDGKLLLSAG
HIIKMWDLDTKEVYRKFTGHSTAVTTLRFATTRPPDSNGLYFLSGAAHDRLLSVWQVRED
GKDKNSVVSFTLTDEPQHIDLVTSNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPLSPS
CTVQMSDTKESPMPIPLLAAVLGADTRTVMLAYGSHLQPVMEKVEINTAERHVCLTRDVQ
TTLSLSMETTVSKVKTPIVNAKSKVLVPGLPGHQAPLKGTSQGSEKRKKDTDTKEMSIAE
RLGEIDLSTISEKGASKGTASLQTDNFAVLLVQGLESNDASILNKVFQTRKDMVIKKTVA
RLPLSAVLPLVEELTKRLQGHPFTAALMVRWLKAVLMHHTSYLASLPDLVTQLGVLYHMI
ESRVKMFHKLTKLHGKLYLLMTQMATSDSSKMVSDVDHTAKLVYEDESSDEDEASGDEGL
PDEDSDHWEEDEAVEEAMTEDNQEESEDEDPDSRTESKANGEEDMEHENESEEE
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggcggccgacggtggcagttcttcgctgcagctaccctgcgttttttcacctaaatca
cgacagttcttagcgctgtgtgcccaggatggcagacttcgcatttggaacacagatagt
aaaacacttcaccaggaatacgtgccttcagctcatctgagtgccacctgtacgtgcata
gcctggggaccatgccggacagtcaaggaggggcctcagaggaagaagaggaaatcggag
gcggtgcaggtggaggagaaggcagacctgttggcgatgggcacagcagctggaactgtg
ctcatctatagtacagcaaagggagcattgcattgcaccctggatggagcccacagtgga
ggagtgaactgtgtccagtggcaccctgaagaaagcttattatacagtggttcagatgac
acaaacattgtagagtgggacttgcagactggcaagaccagaagtaagtggaaggcagac
cgcgcagcggtgaccagtttgtgtgtgagccctgatggtaaactgctgctgtcagctgga
cacataatcaagatgtgggacttggacaccaaggaagtttacaggaaattcacaggccac
tccacggctgtgacgaccctgcgctttgccaccacacgacctcctgacagcaatggcctc
tactttctgtcaggtgctgcccatgatcgactgctcagtgtatggcaagtgcgagaagat
ggaaaggacaagaactcggtggtgtctttcacactgacggatgagccgcagcacattgac
ctcgttacatccaacagcaaggaagaggcggtgaggctggcagtggtgtgtaaggatggg
cagttgcacctctttgagcactttttaaatggcccctgtaagaagcccttgtcaccatcg
tgtacggtgcagatgtcagacacaaaggagtccccgatgccgatcccactgctagcagcg
gtgcttggagcggatactcgaactgtgatgctggcatacggcagccacctacagccagta
atggagaaagtggagatcaacacagcagagagacatgtgtgtttgacccgggatgttcag
accactttgtccctttccatggaaaccacagtctccaaggtgaaaactccaattgtgaat
gccaagagcaaagtgctggtcccaggacttcctggtcaccaagccccacttaaaggaacc
tcacagggatcagagaagaggaaaaaagacacagacaccaaagagatgtcaatagcagag
cgacttggtgaaattgatctgtctacaatctctgagaaaggagcatctaaagggacggct
tcgttacagacagacaattttgcagtactgctggtgcagggcctggagagcaatgatgct
agcatcctgaacaaagttttccagactcgcaaagatatggtaataaagaagacggtggct
cggttacccctctctgcagttctacccttagtggaagaactcacgaagaggctccaaggg
cacccgtttacggcagccttaatggtacggtggctcaaggctgtacttatgcaccacaca
tcatacctagcatcgctgccagaccttgttacccagctgggagtcctttatcacatgatt
gagagcagagtgaagatgttccacaagctaacaaagctgcatgggaagctttatctccta
atgacacagatggcgacaagtgacagcagcaaaatggtttcagatgttgaccacacagct
aagctggtgtatgaagatgagtcatctgacgaagacgaggcctctggtgatgaaggtctt
cccgatgaagactctgatcactgggaggaggatgaggctgtggaggaggcgatgacggaa
gacaaccaggaggaatcagaagacgaggatcccgacagcagaacagaatccaaagcaaac
ggcgaggaggatatggagcatgaaaacgagagtgaagaagaatga

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