Oreochromis aureus (blue tilapia): 116334034
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Entry
116334034 CDS
T07295
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03030
DNA replication
oau03420
Nucleotide excision repair
oau03430
Mismatch repair
oau03440
Homologous recombination
oau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116334034
03420 Nucleotide excision repair
116334034
03430 Mismatch repair
116334034
03440 Homologous recombination
116334034
03460 Fanconi anemia pathway
116334034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116334034
03032 DNA replication proteins [BR:
oau03032
]
116334034
03400 DNA repair and recombination proteins [BR:
oau03400
]
116334034
Transcription factors [BR:
oau03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116334034
DNA replication proteins [BR:
oau03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
116334034
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
116334034
MMR (mismatch excision repair)
116334034
DSBR (double strand breaks repair)
HR (homologous recombination)
116334034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Extensin_1
CATSPERD-E_C
IBR
Motif
Other DBs
NCBI-GeneID:
116334034
NCBI-ProteinID:
XP_031613191
Ensembl:
ENSOABG00000006396
LinkDB
All DBs
Position
LG10:18302255..18344303
Genome browser
AA seq
665 aa
AA seq
DB search
MNVPLTKGAVEALCKGLDVDKPVLQLLNIRQISNASGPPRFRLMMSDGQHSLTSCLLATQ
LNYLSDENLLVPNCVCLLKKTVNNTLADGRRVVVVMDMDILKSAEEAGGKIGNPTPYNTD
GKMSSPQKVSSSTYVPESPPSAAVPGPSYRNYFSPRGRGGSFTGQAPMKASPMKASPMKA
SPMKASPMKASPMKASPMKASAIKASPSKGLTVKVSPMKASPMKANSASPGSSAKVIPIA
SLNPYQSKWTIRARVTNKSSIRTWSNSRGEGKLFSFEIVDESGEIRITAFNKEVDKFFSL
VEQGKVYYISKATLKPANKQYTTLKNDYEMTLHAHSSIVPCDDNQSIPTVHCDFVPIAEL
ENRDKDAIIDVIGICKSAEDVSRITTKNSREVSKRALSIIDQTGKVVTVTLWGEEAENFD
GSTQPVVAIKGARLSDFGGRSLSALFSSTVMVNPDIPQAFRLRAWYDREGFAINSQSLTE
TRSAGTGLNVNWKTLSDIKNEDMGHGEKAQYFSCVATVLYIRKENCLYQACPSADCNKKV
IDQQNGLYRCEKCNREFPNFKYRLLLSANLADFGDNQWVTCFQETAEALLGHSAETLGHL
RDTDEAAFDEVFQKANFTTHIFKNRVKLETYNDESRVKVTVMEVQPVDHREYSRRLLQNI
YKLAR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtacctcttacaaaaggggcggttgaagccctctgcaaaggcttagatgtggac
aagcccgtgctgcagctgctgaacatccgtcagatcagtaatgcctcaggcccacccaga
ttccgacttatgatgagtgatggccagcactctctgacttcttgcctgcttgctacccag
ttaaactatttatctgacgagaacctcctggtaccaaactgcgtgtgtttgttgaaaaag
accgtcaacaacactttggctgatggcaggcgtgtggttgttgttatggacatggatata
ttaaagtcagcagaggaagctgggggaaagattggaaatcccactccttataatacagat
ggtaagatgtcatctccacagaaggtgtcatcaagtacctatgttccagagtcccctccg
tctgctgccgtgcctggaccctcctataggaactacttctctccccgaggcagaggagga
agttttacgggacaagcacccatgaaagcttctcccatgaaagcttctcccatgaaagct
tctcccatgaaagcttctcccatgaaagcttctcccatgaaagcttctcccatgaaggcc
tcggctataaaagcatcacccagtaagggcttaaccgtgaaggtttcacccatgaaagct
tcgcccatgaaggccaacagcgcttctccaggttcttcagcaaaagtgattcctattgca
agcctcaacccctaccaaagcaagtggactatcagagccagagtcaccaacaagtcgagc
attcgcacgtggagtaactccagaggagagggcaagctcttctcctttgagatagtggat
gagagtggtgaaatcaggatcactgctttcaacaaggaagtggacaagtttttctctcta
gtggagcaaggcaaggtgtactacatctccaaggctacactcaagccggccaacaaacag
tacaccacgctgaagaacgactacgagatgaccctccacgctcactcatccatcgtgcca
tgtgatgacaatcagagcatccccacagtgcactgtgactttgtgcccatcgcagaactg
gaaaatcgagacaaagatgctatcattgatgtgattggaatatgtaagagtgctgaggat
gtatcccgtatcaccactaagaacagcagagaagtctccaagagggctctcagcataatc
gaccaaacaggcaaagtcgtgacagtcacactgtggggcgaagaggcagaaaattttgat
ggctctacgcagccagtggttgccatcaaaggagctcgattgtctgattttgggggaaga
tctctctctgcattgttcagttcaacagtcatggtcaacccagatataccacaggccttt
agactgagagcctggtatgaccgggaaggctttgcaatcaacagccagtcgctgacagag
accaggtcagcaggcacaggattaaacgtgaactggaaaacactgagcgacattaagaat
gaagacatgggccatggagagaaggcacagtatttcagctgcgtggcgacagtgctgtac
attcgtaaggagaattgtctgtaccaagcctgtccatctgcagactgcaacaagaaggtc
atcgaccagcagaatgggctgtaccgctgcgaaaagtgtaacagagagttccccaacttc
aaatacagactcttactttctgctaacttagctgacttcggggataaccagtgggtgacg
tgcttccaggagacagctgaggccctgttgggtcacagcgcagaaactctcggacatctc
agagacacagatgaagctgccttcgatgaagtcttccagaaagccaacttcacaactcac
atctttaaaaacagagtcaagctagagacctacaacgatgagagtcgagtgaaggtaact
gtaatggaagtccagccggtcgaccacagggaatacagccggagactcctgcaaaacatc
tacaaattggctagatga
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