Oreochromis aureus (blue tilapia): 116334183
Help
Entry
116334183 CDS
T07295
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
KO
K14793
ribosomal RNA-processing protein 9
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oau03009
]
116334183 (rrp9)
Ribosome biogenesis [BR:
oau03009
]
Eukaryotic type
90S particles
Other 90S particles
116334183 (rrp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
WDR54
WD40_like
SprA-related
Motif
Other DBs
NCBI-GeneID:
116334183
NCBI-ProteinID:
XP_031613387
Ensembl:
ENSOABG00000022233
LinkDB
All DBs
Position
LG5:complement(25192756..25200112)
Genome browser
AA seq
486 aa
AA seq
DB search
MSSSFFIKTKENPKFAKKGKNTAGTKRKGDVDPTGKGKVRAKKSSSKYNEEISSDSETES
ATAPKKRQSTEQIEYEETPQEKKLRLAKLYLEQLKEEEEKKAEEASFETDLIAGRLQEEV
LEQRGKLQRLIAKDLIPPDPSEIRMFRGHKLPITCLVITPDDKNIFSAAKDCSIIKWDVG
SGKKIHTIPGGRKGTEDRHVGHTAHILCMAISSDGKYLATGDMNNLIMIWEAESCKHLYK
FTGHKGAVSGLSFRKGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDSITGLDSLSRER
CVTAGGRDGTVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMVTGADDGSVCLWSVNKKK
PLSTVKRAHGCHGDAGIEQPHWVSSVAALQNSDTIASGAYSCSHNSEVNVWKCGQNYRGL
EPLFSVPVSGFVNSLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYVIPLKRKPSNPE
ETKIAE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcattctttataaaaacaaaagaaaaccccaagtttgccaagaagggaaaa
aatacagcgggcacgaagcgaaagggtgatgtcgatcctaccggaaaaggcaaagtacga
gcgaagaaatcgagctcgaaatataatgaagagatttccagcgactcagagacggagagt
gccacagcgccaaagaaaaggcagtccaccgagcagattgagtatgaggagactccacag
gagaagaagctgagattagctaaactttacctggaacagctcaaggaagaagaggaaaag
aaagcagaagaagcctcctttgagacagatctaattgccggaagacttcaagaagaagtg
cttgaacagagaggaaagctccagcggctcatcgccaaagatctcataccaccagatcct
tcagagatcaggatgttcagaggacacaaacttccaattacatgcctggtcatcactcca
gatgacaagaacatcttttctgctgccaaagactgctccatcattaaatgggatgttggg
agtggtaaaaaaatacatacaatacccggtggaaggaagggtacagaggatcgccatgtt
ggacatacagcccacatcttgtgtatggccatatcgtcggatggcaagtacttggccact
ggagacatgaacaacctgatcatgatttgggaggcagaatcgtgtaaacatttgtataaa
tttacaggacacaaaggtgctgtgtcgggcctttcattcaggaaggggactcatgatctg
tacagcgcctctcatgaccgctcaatcaaagtgtggaatgtggatgagaatgcatatgta
gaaactctctttggccatcaggactcgatcacaggactggacagcctgagccgtgagcgc
tgtgtgactgcaggagggcgggacggtactgtacgggtgtggaagatagctgaagagtct
cagctggtgttccatggccatgagggttcaattgactgtatccaactcataaatgaggag
cacatggtaacaggagcagatgatggctctgtgtgtctttggagtgtcaacaagaagaaa
cctctcagcacagtgaaacgggcccacggttgccatggtgatgcagggatcgagcagcct
cattgggtctcttcagtggcggcacttcagaactctgatactattgcctcaggtgcctat
agctgttcccacaactcagaggttaatgtgtggaaatgtggccagaattatcgtgggctg
gagcctctgttcagtgtgccagtgtctggtttcgtcaacagtttgaagttttcaagctct
ggtcagttcttggtggcaggagttggacaggagcacagattgggacgatggtggagacta
aaggaagccaagaatggaatttatgttattcctcttaaaaggaaaccttctaatccagag
gaaaccaaaatcgctgaatag
DBGET
integrated database retrieval system
