Oreochromis aureus (blue tilapia): 116334635
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Entry
116334635 CDS
T07295
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116334635 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116334635 (nudt21)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
116334635 (nudt21)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
116334635
NCBI-ProteinID:
XP_031613957
Ensembl:
ENSOABG00000016834
LinkDB
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Position
LG1
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AA seq
227 aa
AA seq
DB search
MSVPPPSRSSTGWPRSAPVQFGNKYGPAKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcccgcctcccagccgctcgtccaccggctggccgcgcagcgctcccgtccag
tttgggaacaaatacgggcccgcgaagccgctcacactggagaggaccatcaacctatac
cccctcaccaactacacattcggtaccaaggagccgctgtatgagaaggacagctcggtg
gcagcccggttccagcggatgcgggaagaatttgataagatggggatgcggaggacagtg
gagggtgtcctcattgtccatgaacacagactgcctcatgtgttactcctgcagctgggc
acaactttctttaaactgcccggtggagagttgaaccctggggaagatgaggtggagggt
ctgaagcgcctgatgaccgagatccttggacggcaggatggtgtgaagcaggactgggtg
atcgatgattgtattggtaactggtggcgccccaactttgagcctccacagtatccctat
attccagctcacatcactaaacctaaagagcataagaagctgttcctggtccagttgcag
gaaaaagcactgtttgccgtgcccaaaaactataaactggtggctgcaccgttgtttgaa
ctgtatgacaacgctcctggatatggaccaatcatttccagtctaccacagctgctgagc
aggtttaatttcatctacaactaa
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