Oreochromis aureus (blue tilapia): 116334790
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Entry
116334790 CDS
T07295
Symbol
fancm
Name
(RefSeq) Fanconi anemia group M protein
KO
K10896
fanconi anemia group M protein
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116334790 (fancm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oau03400
]
116334790 (fancm)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
116334790 (fancm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
R3H-assoc
Motif
Other DBs
NCBI-GeneID:
116334790
NCBI-ProteinID:
XP_039459422
LinkDB
All DBs
Position
LG19:16839237..16881960
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AA seq
2096 aa
AA seq
DB search
MKMSGGSNQKTLFQTWGVSVSHNKVVNPIKDGKNAAGRPRTTPGNCPQVATAHLPSHPLW
SENGQGSGYTLANPVGTEDPMPAYEDEDDDLMVVAVYEAERSLQLDNAKFFQHDNPARTE
EPTFSLTPSGGQTYPDFPGFDSSSAKVWIYPTNYPIREYQLKISEAALFQNTLVCLPTGL
GKTFIASVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACYKVMGIPQAHMAELTGSTAAK
QRQEIWRSKRVFFLTPQVMVNDLSRDTCPAQQVKCVVIDEAHKALGNHAYCQVIKLLGSQ
TLQFRILALSATPGGDTKSVQSVISNLLISHIELRSEDSPDIRAHSHQRNVEKVVVPLGE
ALSAYQTHYLQVLEKFMSRLVQNRVMGHKDLRTLTKYQLILARDQFRKNPPPHLKGPQQG
MLEGDFALCISLYHGYELLMQMGLRSLFFYIQGIMDGSREMSRAKNELQRTPTFMDFYKE
METMFMKPSAGPDEPFIYSHPKLEKLEEVVLRHFRLWAESSANNNGSGPQEVSTRVMIFS
SFRESVQEIAAMLNRHAPLIRVMTFMGQASAGKGVKGFTQKEQLEVVHKFRQGGFNTLVS
TCVGEEGLDIGEVDLIVCFDAQKNPIRLVQRMGRTGRKRRGRIVVILAEGREERTYNQSQ
SNKRSVYKSITGNKNGFHMYPNSPRMLPEGLYPKLHKMHITCGQFDHQENSRRSVRGRRS
HAQSRASLIHPQNLIQQGSSTSNGFLSSTEYSLWESTMKLEDTEPHPTLKQSHFLSIPSD
PLPQEEVSKGKQPSRELSLWEWRHWQHKALPSHVVDHSLRCSHFIKVMELIDGMREENEG
ECCYERELLPYLHKEDTVKSRRKKQKGTKTCTKTTNDKPKPSHSSWSELEYIDEEFEGSE
TRTAGLLTPLAVMKQSPPAEDNNEIPYDDSIDHLKLEAEDQITDIDKCETVTEDLIKADG
EPVKLDNLSQLPAKSDEDEDVQLQAMFYFPKWDAAPLPCCDKLLPGRDESLKVILANVAE
LLSRSPPSLMDDLEPPPSLCPSPQQPPQPFLVSFTLDVDDDDDDDDDDDDDDEMIMREVE
KLPDELPNGTDCGKISPDFPDQEKHPASVAANSPTWDEVFGEDVNDINDIRDDSKESDDD
EKCNGFKEDQVHVEADSVSEEKQSWDDVRDEEIPHLTDGVLKDDKASECSSEMDESIDLF
EDDDAFLQMTIPDIPTPLDGVTPATSPTEKKSETVHVHTPINPCNTTQSADGTHRLRTVE
SKGVAFSKGLTHTVNAKLIIQNTNTHNTTVTKLNMHTPAQTKLVTDNSVMGSAVTPHFKS
PESFNSMHDFFSVNFELGYSLEDSEEEDEAEGFPPSCMPGSSQPKKQIDSTTLSAAVSNS
STPCNSFAKQRIPPVCSESKHSTPQMLSECRTSKSGALPSPIMSPGAKRTLMPGLPSSLK
RRRAQCGITVAERGPNEENGSCHVSDSSPHAVEGNSDSEDEVVLHKRRHPNKVNPLSSPE
VSKINSDVDSPLVVKRKHAAALNTSDETGGESVSDDDFQNESVSVCRATVQRAERKGATA
KRGKCRKGRQFLDEEAQLSEVEEGVEVSSDEEDGEEQNQSLNGFVVDNTQFSQGLNDSEM
HGVYLKSVRSPAVQGKFKISNRRHHNMDIFSQVPEMDEPYEEDSFVVGSDEEEVGTSEED
AEDVDLLPEASFVDGRKQYATRRRVFLHNARARGSTKTRAQPPPEQRAEMKTKRTRVIQM
NDSSEEETDEVSKERALKAGDGVLPSSPKMVPPEPCGKERKKAVSLSSKVSLLSKAQRSS
VSEEQQNERCRQRIENQHLLSDELDFAESQPQVSSKKQSQAVPATSLAPQKTTTEDLTVS
ETSAPSGSVCILVDSRCISSGVELLTSLRQRHAATVHVCSLDSSYFIVSNRMAVERQSQS
DLAAAQNRKRLAERVNSLQGLFERVCMIVEKDRTKTGEASRPFQRTRYFDSTLAALVRSG
VRLLWSDGAEESAGLLADAARLEHRKGHGIGVPVEVKGQHRQQALQLYLSLPSVNYVQAL
NMSHNFTSIAQLINSPIEAIQNGGCMSRPKAEEIYRFLRYSCDSFLMNMSKSGKNS
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgagtggcggttcaaaccagaagactttatttcagacttggggtgtctccgtc
tcccacaacaaagttgttaacccgataaaagatggcaaaaatgctgctgggcgccccaga
acaactccaggcaactgtccccaggtagctacagcacatcttccttctcatcccctctgg
tctgaaaatggtcaggggtcaggatatacattagctaacccagtggggacagaggacccc
atgcctgcgtatgaagatgaagacgatgatctgatggtggtcgccgtatatgaagctgaa
agaagcctacagcttgataatgctaaatttttccagcatgacaaccctgccagaacagaa
gagcccaccttctctctaaccccctcaggtgggcagacataccctgacttccctggcttt
gacagttcctcagctaaggtatggatctacccgaccaactatcctatcagggagtaccag
ctgaagatatcagaggctgccctctttcagaacactctggtatgtcttcccactggtctg
ggaaagacctttatagcttctgtggttatgtacaacttctatcgctggtatccatcaggc
aagattgttttcatggctcccaccaagcctctagtggcccaacagattgaggcctgttat
aaagtgatgggcatcccacaagcacacatggctgagctgacaggtagcacagcagcaaag
cagagacaagagatttggaggtccaagcgggtcttcttcctcacgcctcaggtcatggtt
aatgatctgtccagagacacctgcccagcccagcaggtcaagtgcgtggtgatcgatgaa
gcacacaaagcgctgggcaaccatgcttactgccaggtcatcaaactactcggcagccag
actttgcagttccgcatactggctcttagcgccaccccaggaggagatacaaagtcggtg
caatctgtgatctccaatttgctcatctcccatatcgagctacgttcagaagacagccct
gacatccgggctcactcccaccagcgcaatgtggagaaagttgtggttcctctgggtgag
gccctttcagcttaccagacacactacctgcaggtgctggagaaattcatgtctcgtctg
gtccagaaccgagtgatgggccacaaggatctgcggactcttaccaaataccagctcatt
cttgccagggatcagttcagaaagaatccaccaccacacctcaagggtccacagcaggga
atgctggagggcgactttgccctttgcatcagcctgtaccatggctacgagctgctaatg
cagatgggcctccgatctctcttcttttacatccaaggaatcatggacggatccagagag
atgtccagggccaagaacgaactgcagagaactcccacgttcatggatttctacaaggaa
atggaaactatgtttatgaagccatctgctggtccagatgagccattcatttacagccac
cccaaactggagaaactggaggaggttgtgctgcggcatttcagactgtgggctgagagc
tcagcaaacaataatggttcaggtcctcaggaggtaagcacgcgtgtgatgatcttttca
tcatttcgagagagtgtacaggagatcgcagccatgttgaaccgccatgctccactgatc
agggtcatgacatttatgggccaagcttcagctgggaagggggtcaaaggctttacccaa
aaggagcaactggaggtggtacacaagttcagacagggaggcttcaacacactggtgtca
acctgtgtgggggaagagggcctggatatcggagaggtagacctcattgtttgcttcgat
gcacagaagaatcctattcgtttggtacagcgaatggggcgtaccggacgtaagcgtcgg
ggacgcattgttgtcatcctggctgaggggcgggaagagcgaacttacaatcagagccag
agcaacaagcgcagcgtctacaagtccatcactggcaacaaaaatgggttccacatgtac
cccaacagtccccgtatgctgcctgaagggctgtaccccaaactccataagatgcacatt
acctgtgggcagtttgaccaccaggagaacagcaggcggtctgtcaggggtcggcggtct
cacgcccagagtcgggcctcactcatccaccctcaaaacctaattcaacagggcagctca
acatccaatggttttctgagcagtacagaatattccctatgggagtcaaccatgaagctg
gaggatactgagccccatccaaccctgaagcagtcacacttcctctcaatacccagtgac
ccacttcctcaggaggaggtttccaaaggcaaacaaccatccagggagctgtctttgtgg
gaatggagacactggcaacacaaagcgctcccttctcatgttgttgatcattccctccgc
tgcagccactttattaaggtgatggagctcatagacggcatgagagaggaaaatgagggg
gaatgttgttacgaacgggaacttcttccttacctccacaaagaggacactgtgaagagc
agacggaaaaagcagaagggcacaaagacctgcaccaaaaccaccaacgacaaacctaaa
ccatcccattcctcttggtctgaactggaatatatcgatgaggaatttgaggggagcgag
acacgaacagctgggttattaaccccgttggccgtgatgaaacaaagccctcctgctgaa
gataataatgagataccttatgatgacagcatagaccacttaaaactcgaggcagaagat
cagattactgatattgataaatgtgaaactgtcactgaggaccttatcaaagcagatgga
gaacctgtgaaattagacaatctgtcacagctgcctgctaaaagtgatgaagatgaagat
gttcaacttcaggcaatgttctactttcctaaatgggatgcagccccactgccctgctgt
gataagctcctcccagggagagatgagagtcttaaggtcatcctggccaatgtggcggaa
ctcctgtcccgatctccaccatcactcatggatgacttagagccccctccatcactttgt
ccttctcctcaacagcctcctcagcccttccttgtcagctttaccttggatgtggacgac
gacgacgatgatgatgatgatgatgatgatgatgatgagatgataatgagagaagttgag
aagcttccagatgagcttccaaatggtacagactgtggtaaaatctctcctgactttccc
gatcaggagaagcaccctgccagtgtagcagccaacagcccaacttgggatgaggttttt
ggggaggacgtaaatgatattaatgatatcagggatgacagcaaggagtcagatgatgat
gaaaagtgcaatggcttcaaggaggatcaggttcacgtagaagctgatagtgtaagtgag
gaaaaacagagctgggatgatgtgagggatgaagaaatcccacacttgacagatggtgtt
ttgaaagacgacaaagcctccgagtgcagctcggagatggatgagagcatcgatctgttc
gaggatgatgacgccttcctgcagatgaccattcccgatatccccactcctttggatggc
gtcacacccgcgacatccccgacagagaagaagtctgaaacagtgcacgtacatacccca
attaacccatgtaacactacacagtcagcagatggcacccacagattgaggacagtggaa
tcaaaaggagtggcattcagcaagggtttgactcatactgtaaatgccaagctgataatc
cagaacacaaacacccataacactacagtgacaaaacttaatatgcacacaccagcacaa
actaaacttgtaacagataattcggtcatgggcagtgcagttacaccccattttaaatct
cctgagtcatttaacagcatgcatgacttcttttcagtcaattttgagcttggctattca
ctggaagactcagaggaagaagatgaagcagagggctttcctccctcttgtatgcctggg
tcttcacagcctaaaaagcagattgactccaccacactttcggcagctgtctctaactct
tctactccctgtaacagctttgctaaacagagaatacctccagtttgcagtgaatccaag
cattccacaccacaaatgctgtcagaatgtaggacgtctaaaagtggtgctctcccgtct
ccgatcatgtccccgggagcaaagcgaaccttaatgcccggtctgccctccagcttgaaa
cgcagacgagcacaatgtggcatcactgtagcagagagaggccctaatgaggaaaacggc
tcatgccatgtttctgactcttctcctcatgcagtggagggcaacagtgacagcgaggat
gaagttgtgcttcacaaaagaagacatccgaacaaagtcaaccccttatcatcccccgaa
gtgtctaagatcaacagtgatgtggactccccgctggtagtgaaaagaaaacatgctgct
gcactcaatacttctgatgaaacgggaggcgaatctgtttctgatgatgatttccagaat
gaatctgtttctgtgtgcagagccacagtgcagagagctgaaaggaaaggggccacagcc
aagcgcggcaaatgccgaaaagggcgtcagttcttggatgaagaagcacagctgtcagag
gtcgaggaaggggtagaggtctcgtctgatgaggaggatggagaagaacagaatcagtct
ctcaacggttttgtggtcgacaacacacagttctctcagggcctgaatgactcagagatg
catggagtgtacctgaagtcagtgagaagccctgcagtccagggcaaattcaaaatttcc
aacagaagacatcacaacatggacatcttttcccaggtgcctgagatggatgagccgtat
gaagaggacagctttgtagtgggcagtgatgaggaggaggtgggcaccagtgaggaagat
gctgaagatgttgaccttctgcccgaggcctcgtttgtggacgggagaaagcagtatgcc
accaggcgccgtgttttcctgcacaacgccagagcaagaggcagcacaaaaaccagagct
cagcctccaccagaacagagagccgagatgaaaactaaacgcacccgggtcatacaaatg
aatgattctagtgaggaggagacagatgaagttagtaaagagagggctctcaaagcagga
gatggtgtgttgccttcatcgccaaagatggtaccgccagagccttgtgggaaagaaaga
aagaaagctgtgtcgttatcttctaaggtctcactgttgagcaaagcacaaaggagctct
gtgagtgaagaacagcaaaatgagaggtgtcgccagaggatagaaaatcagcatctcctc
tctgacgagctagactttgcggagtcgcaaccgcaagtttcctcaaagaagcaatcgcag
gcagtcccagccacttcattggctcctcaaaagaccacaactgaggatttaacagtgagt
gaaacctccgctccatctgggtctgtttgcatcctggtggacagtcgctgcatcagtagc
ggggtggagttgctgaccagcctgcgtcagcgacacgcagccaccgtccacgtctgctct
ttggacagcagctacttcattgtcagcaaccgcatggcggtggaaaggcagagccaatca
gatctggctgcggcacagaaccggaaacgactggcggaaagagtgaacagcttgcagggg
ttgtttgagcgcgtgtgcatgatagtggagaaagaccgaaccaagactggtgaggcatct
cgtccctttcagcgaactcgctactttgacagcactttggcagcgctagtgcgatcaggg
gttcgcctgctgtggagcgacggtgctgaagagagcgccgggctgctggcagatgcggca
cgtctggagcaccgcaagggtcacggcatcggcgtaccagtggaagtcaaagggcagcac
aggcagcaagcgctgcagctgtacttgagcttgccttcagttaactatgttcaagctctc
aacatgagccacaacttcacatcgatcgcccagctaataaacagcccgatagaagccata
cagaatggagggtgtatgagtcgacccaaagcagaggagatctatcgcttcctgcgctac
tcctgtgactccttcctcatgaatatgtcaaaatcaggaaagaacagctag
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integrated database retrieval system